| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71908380
Identifier: 71908380
GI number: 71908380
Start: 2967613
End: 2968182
Strand: Reverse
Name: 71908380
Synonym: Daro_2767
Alternate gene names: NA
Gene position: 2968182-2967613 (Counterclockwise)
Preceding gene: 71908381
Following gene: 71908379
Centisome position: 65.94
GC content: 62.28
Gene sequence:
>570_bases ATGAATAAATCTCTCGACATCATCCACGATGAACACCGGGCCCTGGCGGCCATGCTCAGCGGCCTGCGTACCCTGGTCGC CGAAATCGAAGCCGGTCGTCAGCAGCCGGATTTCGATCTGCTCGCTTCGATGATCCGCTACGTCGACGAGGTGCCGGAAA AGGTGCACCACCCGAAGGAGGATCAATATCTCTTCGCCAAACTGCGCCTGCGCAGCCCGGAAGCCTTGCCCGTCATCGAG CAACTGGAAGCCGACCATCTGCAGGGCGAGGCGAGGATCAGCGCGCTGCGTGCCGCGCTGGCCGCCTATCGTCAGCAAGG GGCGGCCGGATTGGCCAGTTTCAAGCTGGCCCTGACCATCTACCTCGAGCAGGAATGGCATCACATGAATACCGAGGAGC ACAAACTCTTTCCGCTGGCCAAGGCGCATCTGACCGCCGAGGACTGGGCGGAGATCGACGCGGCCTTCCTGGCCAACGGC AATCCCTGGGAGGGGTCTGCCGGCGAGTACGCCGCGCTGTTCTCGAAAATAGTCAATATGGTGCCGGCACCGGTCGGTCT CGGCGGTTGA
Upstream 100 bases:
>100_bases TGGTCTTCGATGGCAGCAGCGACGAGGTGCGGGCCGATCCGGAATTGATCCAGAAACACCTGGGCGTTTGATCGCCCGGG GTTTTTTGCAAGGAAAAATC
Downstream 100 bases:
>100_bases TCGCGCCCCGTTCCCGATCCCCGCATGTCGATGCCTTCCCGTGATCTGCTGGCGACGCTCGCCCCCGGACTGTTCGTCTT CCTGTGGAGCACCGGTTTCA
Product: hemerythrin HHE cation binding region
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MNKSLDIIHDEHRALAAMLSGLRTLVAEIEAGRQQPDFDLLASMIRYVDEVPEKVHHPKEDQYLFAKLRLRSPEALPVIE QLEADHLQGEARISALRAALAAYRQQGAAGLASFKLALTIYLEQEWHHMNTEEHKLFPLAKAHLTAEDWAEIDAAFLANG NPWEGSAGEYAALFSKIVNMVPAPVGLGG
Sequences:
>Translated_189_residues MNKSLDIIHDEHRALAAMLSGLRTLVAEIEAGRQQPDFDLLASMIRYVDEVPEKVHHPKEDQYLFAKLRLRSPEALPVIE QLEADHLQGEARISALRAALAAYRQQGAAGLASFKLALTIYLEQEWHHMNTEEHKLFPLAKAHLTAEDWAEIDAAFLANG NPWEGSAGEYAALFSKIVNMVPAPVGLGG >Mature_189_residues MNKSLDIIHDEHRALAAMLSGLRTLVAEIEAGRQQPDFDLLASMIRYVDEVPEKVHHPKEDQYLFAKLRLRSPEALPVIE QLEADHLQGEARISALRAALAAYRQQGAAGLASFKLALTIYLEQEWHHMNTEEHKLFPLAKAHLTAEDWAEIDAAFLANG NPWEGSAGEYAALFSKIVNMVPAPVGLGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20928; Mature: 20928
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSLDIIHDEHRALAAMLSGLRTLVAEIEAGRQQPDFDLLASMIRYVDEVPEKVHHPKE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC DQYLFAKLRLRSPEALPVIEQLEADHLQGEARISALRAALAAYRQQGAAGLASFKLALTI CCEEHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEE YLEQEWHHMNTEEHKLFPLAKAHLTAEDWAEIDAAFLANGNPWEGSAGEYAALFSKIVNM EEEHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH VPAPVGLGG CCCCCCCCC >Mature Secondary Structure MNKSLDIIHDEHRALAAMLSGLRTLVAEIEAGRQQPDFDLLASMIRYVDEVPEKVHHPKE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC DQYLFAKLRLRSPEALPVIEQLEADHLQGEARISALRAALAAYRQQGAAGLASFKLALTI CCEEHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEE YLEQEWHHMNTEEHKLFPLAKAHLTAEDWAEIDAAFLANGNPWEGSAGEYAALFSKIVNM EEEHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH VPAPVGLGG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA