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The map label for this gene is yfdH [C]

Identifier: 71908372

GI number: 71908372

Start: 2958839

End: 2959927

Strand: Reverse

Name: yfdH [C]

Synonym: Daro_2759

Alternate gene names: 71908372

Gene position: 2959927-2958839 (Counterclockwise)

Preceding gene: 71908373

Following gene: 71908371

Centisome position: 65.76

GC content: 50.05

Gene sequence:

>1089_bases
ATGTTCAATACACAGCAGGCTTACGTAAATACTTGCCGAGATACTGTGCTCTCAAGTACATCAAAAAGAATGCTTGTCGA
AATAGATGAGTGCAAGCCGCATGTCGGTCTTCCGTCACCTGAAAAGAAACGTCTTCACTCACTGGCAGAGCTACTGGTCA
CTTGCATCGTGCCCAGTCTCAATGAACATGACAACCTGAAAGCGCTCCTGCCTCAATTGGCCGATCTATTGACGGGCATT
GGGGTGAACTGGGAGGTCATTGTTGTTGATGATGGGAGTAGCGATGCCACCCCCTTGCTGATGACGGAGTGGGTTAAGAA
ACCAGGATTCAGTTACCTGCAGCTGTCACGTAACTTTGGGAAAGAAGCGGCTCTGACAGCGGGTCTGGAGGCGGCCAAAG
GGCATGCCGTCGTGTTGTTGGACGCAGACTTGCAGCACCCGGTTTCCCTTATCCCGGTCATGATTAAAAAATGGTTATCC
GGTATCGACAATATCTACGCGGTTCGCAAAACACGGGAAGACGAGAGCTGGATTAAACGAGTCGGATCACAGCTGTTTTA
CAAATTATTAAGTACATCTCGTCGTGTCGAAGTACCTGCTCATGCCGGGGATTTTCGTCTGATGGATCGACGGGTAGTTG
AAGCCTTGTTGCAACTACCCGAGAGAACACGCTTCATGAAGGGGTTGTACGCCTGGGTCGGTTTCCAATCAGAGGCCATA
GAGTACGTACCGAGTGATCGTCTGTATGGAAGTAGTCGATTCGACATCGTTAAGCTTTTGGGCCTTGCCCTGGCCGGGGT
AACCGCTTTTACGACCTGGCCGTTACGCTTGGTCAGTGGAATTGGCATCTTTGTCGCGATACCTTCCTTTTTCTATGGCC
TCTACCTGGTCGTGGACTACCTGCTGCACGGCCATCAAATCTCTGGTTGGACGACCATCGTGACACTCCAACTCTTCTCT
TCCGGGATCGTGTTGTTGTCGATCGGTATTGTTGGAGAATATCTCGCACAAGTATTTGAAGAAGTAAAAGGACGCCCGTT
GTATTTGATTCGCCAACGTCTTGGCTCAGGCTCTTTCTACTCGAGCTAA

Upstream 100 bases:

>100_bases
GCGCGCGAAGTTTTGAATTGACTTCGATGGGCACGAGCGACCCGGAGCGATCTTTCCACAAAAGTAAGCTCCTCCGTATG
GCGGCCGATAGGAGTTCAAA

Downstream 100 bases:

>100_bases
TTCCGTGACCAACTGGCTATTGGATTTGCATAATCTGCCGTTGCTGCCTGAGAAAAAGCGGTGGCTTCTCATCTTTCTCA
TCTGCACACTGTGGCTCGGA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MFNTQQAYVNTCRDTVLSSTSKRMLVEIDECKPHVGLPSPEKKRLHSLAELLVTCIVPSLNEHDNLKALLPQLADLLTGI
GVNWEVIVVDDGSSDATPLLMTEWVKKPGFSYLQLSRNFGKEAALTAGLEAAKGHAVVLLDADLQHPVSLIPVMIKKWLS
GIDNIYAVRKTREDESWIKRVGSQLFYKLLSTSRRVEVPAHAGDFRLMDRRVVEALLQLPERTRFMKGLYAWVGFQSEAI
EYVPSDRLYGSSRFDIVKLLGLALAGVTAFTTWPLRLVSGIGIFVAIPSFFYGLYLVVDYLLHGHQISGWTTIVTLQLFS
SGIVLLSIGIVGEYLAQVFEEVKGRPLYLIRQRLGSGSFYSS

Sequences:

>Translated_362_residues
MFNTQQAYVNTCRDTVLSSTSKRMLVEIDECKPHVGLPSPEKKRLHSLAELLVTCIVPSLNEHDNLKALLPQLADLLTGI
GVNWEVIVVDDGSSDATPLLMTEWVKKPGFSYLQLSRNFGKEAALTAGLEAAKGHAVVLLDADLQHPVSLIPVMIKKWLS
GIDNIYAVRKTREDESWIKRVGSQLFYKLLSTSRRVEVPAHAGDFRLMDRRVVEALLQLPERTRFMKGLYAWVGFQSEAI
EYVPSDRLYGSSRFDIVKLLGLALAGVTAFTTWPLRLVSGIGIFVAIPSFFYGLYLVVDYLLHGHQISGWTTIVTLQLFS
SGIVLLSIGIVGEYLAQVFEEVKGRPLYLIRQRLGSGSFYSS
>Mature_362_residues
MFNTQQAYVNTCRDTVLSSTSKRMLVEIDECKPHVGLPSPEKKRLHSLAELLVTCIVPSLNEHDNLKALLPQLADLLTGI
GVNWEVIVVDDGSSDATPLLMTEWVKKPGFSYLQLSRNFGKEAALTAGLEAAKGHAVVLLDADLQHPVSLIPVMIKKWLS
GIDNIYAVRKTREDESWIKRVGSQLFYKLLSTSRRVEVPAHAGDFRLMDRRVVEALLQLPERTRFMKGLYAWVGFQSEAI
EYVPSDRLYGSSRFDIVKLLGLALAGVTAFTTWPLRLVSGIGIFVAIPSFFYGLYLVVDYLLHGHQISGWTTIVTLQLFS
SGIVLLSIGIVGEYLAQVFEEVKGRPLYLIRQRLGSGSFYSS

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=237, Percent_Identity=26.5822784810127, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1788692, Length=301, Percent_Identity=37.2093023255814, Blast_Score=227, Evalue=8e-61,
Organism=Escherichia coli, GI1788588, Length=307, Percent_Identity=28.6644951140065, Blast_Score=154, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 40360; Mature: 40360

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNTQQAYVNTCRDTVLSSTSKRMLVEIDECKPHVGLPSPEKKRLHSLAELLVTCIVPSL
CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
NEHDNLKALLPQLADLLTGIGVNWEVIVVDDGSSDATPLLMTEWVKKPGFSYLQLSRNFG
CCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHCC
KEAALTAGLEAAKGHAVVLLDADLQHPVSLIPVMIKKWLSGIDNIYAVRKTREDESWIKR
CHHHHHHCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VGSQLFYKLLSTSRRVEVPAHAGDFRLMDRRVVEALLQLPERTRFMKGLYAWVGFQSEAI
HHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHH
EYVPSDRLYGSSRFDIVKLLGLALAGVTAFTTWPLRLVSGIGIFVAIPSFFYGLYLVVDY
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLHGHQISGWTTIVTLQLFSSGIVLLSIGIVGEYLAQVFEEVKGRPLYLIRQRLGSGSFY
HHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
SS
CC
>Mature Secondary Structure
MFNTQQAYVNTCRDTVLSSTSKRMLVEIDECKPHVGLPSPEKKRLHSLAELLVTCIVPSL
CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
NEHDNLKALLPQLADLLTGIGVNWEVIVVDDGSSDATPLLMTEWVKKPGFSYLQLSRNFG
CCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHCC
KEAALTAGLEAAKGHAVVLLDADLQHPVSLIPVMIKKWLSGIDNIYAVRKTREDESWIKR
CHHHHHHCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VGSQLFYKLLSTSRRVEVPAHAGDFRLMDRRVVEALLQLPERTRFMKGLYAWVGFQSEAI
HHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHH
EYVPSDRLYGSSRFDIVKLLGLALAGVTAFTTWPLRLVSGIGIFVAIPSFFYGLYLVVDY
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLHGHQISGWTTIVTLQLFSSGIVLLSIGIVGEYLAQVFEEVKGRPLYLIRQRLGSGSFY
HHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
SS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]