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The map label for this gene is glcD [H]

Identifier: 71908363

GI number: 71908363

Start: 2944439

End: 2945845

Strand: Reverse

Name: glcD [H]

Synonym: Daro_2750

Alternate gene names: 71908363

Gene position: 2945845-2944439 (Counterclockwise)

Preceding gene: 71908364

Following gene: 71908359

Centisome position: 65.45

GC content: 60.77

Gene sequence:

>1407_bases
ATGACCTCTACGCCCAAGTCGTCTGATCTGAAATCAATCCTGGCCGGGATCGTCGGTACCGCTCAGGTGCTGACTGACCC
GGTCGAGTTGGCGCCGTTTCTGACAGACTGGCGCGGTCGTTATCGCGGAGTGGCGCAATGCGTCGTCCGCCCAGGTAATA
CGGCCGAGGTGGCTGCGGTGGTCAAAGCCTGTGTCGATGCCGGCATCCCCATCGTGCCGCAGGGCGGCAACACCAGCCTG
TGTGGTGCGGCGACCCCGGACCAAGCGGGCTGGGCGGTGGTCATCAGTTTGAGCCGCCTGAACCGGATTGCTGCGGTCGA
CGCGAAAAACAACACAATTTCAGTGCAAGCCGGTTGCACGCTAGGTGCGGTGCAGGAAGCGGCGCGTGCCGCCGACCGCC
TGTTCCCGCTGGCGCTGGCTTCCGAGGGGACATGCCAGATCGGTGGCAACCTGTCGACGAATGCCGGCGGTGTGCAGGTG
CTGCGCTACGGCAACACCCGCGAACTGACGCTCGGCCTCGAAGTCGTCCTGCCCAGCGGCGAAATCTGGAACGGCCTGCG
TGGCCTGCGCAAGGACAATACCGGCTACGATCTGAAGCAGCTATTTATCGGTGCCGAAGGTACGCTTGGCATCATCACGG
GCGCCGTTCTGAAGCTCTTTCCGCTACCGAAAACGCAGGTTACCTGCTGGCTGAATGTGGCTTCACCAAATGCTGCGGTC
GACCTGCTGAATTCGGCAAAATCTGCTTTTGATGCGCAACTGACGGCTTTCGAGCTGGTTTCCGAAACTTCGCTCGGGCT
GGTCCTGAAGCATATTCCCGCTACCCAGCGGCCGACCACAACCAGCCCCTGGTATGTGCTGGCCGAGTTCTCGGCGGCCG
AACCGGCTGCCATCGAAGCCTGGCTGGCCGAGCGGCTGGAAGCGGGTGAGGTGAGTGACGGTGTCGTGGCGCAATCCGAA
ATCCAGGCAAAAAGACTGTGGGCCTTGCGCGAGAATATTTCCGAGGCTCAGAAGATCGAAGGCATCAGCATCAAGCACGA
TATCTCGGTGCCGGTTTCCAGTATTCCGGCATTCCTGATGACCGCCGATGCGGCCTTGGCCAAAGCCTTTCCCGGCATCC
GTGTTGTTGCTTTCGGTCATGTCGGTGATGGCAACCTGCATTACAACCTGTCGAAAGCCGATGCCCACGACAACGCGGCG
TTTATCGCCAGCCAGCCGGAGGTCAATCGACTCGTCCATGACACGGTCCACGCGTTGAACGGCTCGATTTCGGCCGAGCA
CGGTATCGGCCAGTTGAAGCGCGACGAAATCCGGCGCTACAAGAGTTCGGTCGAAATGGCGCTGATGCGTTCGATCAAGC
AGGCGCTTGATCCGCAGGGACTGATGAATCCCGGCAAGGTGATTTAG

Upstream 100 bases:

>100_bases
GCCGATGCGCCGGAAATCGACGGACTGGTTTACCTGGATGGTCATTTCGATGCCCAGCCGGGCGACTTCCTGCAGGTCAA
GGTCATTGATGCCGACCACC

Downstream 100 bases:

>100_bases
GCCGGAGGCTGACTGGCGTCAGTGGCTGCCTGCAACCGGGGCCGCTTCAAGCGCGAAGGGCAGCGTAAAACAGAAATTGC
TGCCGACACCGACTTCGCTG

Product: FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MTSTPKSSDLKSILAGIVGTAQVLTDPVELAPFLTDWRGRYRGVAQCVVRPGNTAEVAAVVKACVDAGIPIVPQGGNTSL
CGAATPDQAGWAVVISLSRLNRIAAVDAKNNTISVQAGCTLGAVQEAARAADRLFPLALASEGTCQIGGNLSTNAGGVQV
LRYGNTRELTLGLEVVLPSGEIWNGLRGLRKDNTGYDLKQLFIGAEGTLGIITGAVLKLFPLPKTQVTCWLNVASPNAAV
DLLNSAKSAFDAQLTAFELVSETSLGLVLKHIPATQRPTTTSPWYVLAEFSAAEPAAIEAWLAERLEAGEVSDGVVAQSE
IQAKRLWALRENISEAQKIEGISIKHDISVPVSSIPAFLMTADAALAKAFPGIRVVAFGHVGDGNLHYNLSKADAHDNAA
FIASQPEVNRLVHDTVHALNGSISAEHGIGQLKRDEIRRYKSSVEMALMRSIKQALDPQGLMNPGKVI

Sequences:

>Translated_468_residues
MTSTPKSSDLKSILAGIVGTAQVLTDPVELAPFLTDWRGRYRGVAQCVVRPGNTAEVAAVVKACVDAGIPIVPQGGNTSL
CGAATPDQAGWAVVISLSRLNRIAAVDAKNNTISVQAGCTLGAVQEAARAADRLFPLALASEGTCQIGGNLSTNAGGVQV
LRYGNTRELTLGLEVVLPSGEIWNGLRGLRKDNTGYDLKQLFIGAEGTLGIITGAVLKLFPLPKTQVTCWLNVASPNAAV
DLLNSAKSAFDAQLTAFELVSETSLGLVLKHIPATQRPTTTSPWYVLAEFSAAEPAAIEAWLAERLEAGEVSDGVVAQSE
IQAKRLWALRENISEAQKIEGISIKHDISVPVSSIPAFLMTADAALAKAFPGIRVVAFGHVGDGNLHYNLSKADAHDNAA
FIASQPEVNRLVHDTVHALNGSISAEHGIGQLKRDEIRRYKSSVEMALMRSIKQALDPQGLMNPGKVI
>Mature_467_residues
TSTPKSSDLKSILAGIVGTAQVLTDPVELAPFLTDWRGRYRGVAQCVVRPGNTAEVAAVVKACVDAGIPIVPQGGNTSLC
GAATPDQAGWAVVISLSRLNRIAAVDAKNNTISVQAGCTLGAVQEAARAADRLFPLALASEGTCQIGGNLSTNAGGVQVL
RYGNTRELTLGLEVVLPSGEIWNGLRGLRKDNTGYDLKQLFIGAEGTLGIITGAVLKLFPLPKTQVTCWLNVASPNAAVD
LLNSAKSAFDAQLTAFELVSETSLGLVLKHIPATQRPTTTSPWYVLAEFSAAEPAAIEAWLAERLEAGEVSDGVVAQSEI
QAKRLWALRENISEAQKIEGISIKHDISVPVSSIPAFLMTADAALAKAFPGIRVVAFGHVGDGNLHYNLSKADAHDNAAF
IASQPEVNRLVHDTVHALNGSISAEHGIGQLKRDEIRRYKSSVEMALMRSIKQALDPQGLMNPGKVI

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=452, Percent_Identity=36.7256637168142, Blast_Score=289, Evalue=3e-78,
Organism=Homo sapiens, GI37595756, Length=486, Percent_Identity=30.6584362139918, Blast_Score=179, Evalue=6e-45,
Organism=Homo sapiens, GI37595754, Length=509, Percent_Identity=29.4695481335953, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI4501993, Length=201, Percent_Identity=31.3432835820896, Blast_Score=88, Evalue=2e-17,
Organism=Escherichia coli, GI1789351, Length=465, Percent_Identity=30.5376344086021, Blast_Score=148, Evalue=7e-37,
Organism=Escherichia coli, GI1787977, Length=512, Percent_Identity=24.609375, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788454, Length=176, Percent_Identity=32.3863636363636, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI48994907, Length=220, Percent_Identity=26.8181818181818, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17534361, Length=446, Percent_Identity=33.6322869955157, Blast_Score=244, Evalue=7e-65,
Organism=Caenorhabditis elegans, GI71992373, Length=477, Percent_Identity=28.5115303983228, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI71992381, Length=477, Percent_Identity=27.8825995807128, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI71992392, Length=377, Percent_Identity=29.1777188328912, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17556096, Length=181, Percent_Identity=29.2817679558011, Blast_Score=82, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6320023, Length=478, Percent_Identity=35.1464435146443, Blast_Score=303, Evalue=3e-83,
Organism=Saccharomyces cerevisiae, GI6320764, Length=482, Percent_Identity=34.0248962655602, Blast_Score=283, Evalue=3e-77,
Organism=Saccharomyces cerevisiae, GI6320027, Length=444, Percent_Identity=28.3783783783784, Blast_Score=152, Evalue=1e-37,
Organism=Drosophila melanogaster, GI18921117, Length=460, Percent_Identity=35.6521739130435, Blast_Score=280, Evalue=2e-75,
Organism=Drosophila melanogaster, GI24639277, Length=460, Percent_Identity=35.6521739130435, Blast_Score=280, Evalue=2e-75,
Organism=Drosophila melanogaster, GI24639275, Length=460, Percent_Identity=35.6521739130435, Blast_Score=280, Evalue=2e-75,
Organism=Drosophila melanogaster, GI24653753, Length=189, Percent_Identity=30.1587301587302, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 49372; Mature: 49241

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTPKSSDLKSILAGIVGTAQVLTDPVELAPFLTDWRGRYRGVAQCVVRPGNTAEVAAV
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHH
VKACVDAGIPIVPQGGNTSLCGAATPDQAGWAVVISLSRLNRIAAVDAKNNTISVQAGCT
HHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEEEHHHCCEEEEEECCCCEEEEECCCC
LGAVQEAARAADRLFPLALASEGTCQIGGNLSTNAGGVQVLRYGNTRELTLGLEVVLPSG
HHHHHHHHHHHHHHEEEEECCCCCEEECCCCCCCCCCEEEEEECCCEEEEEEEEEEECCC
EIWNGLRGLRKDNTGYDLKQLFIGAEGTLGIITGAVLKLFPLPKTQVTCWLNVASPNAAV
HHHHHHHHCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHH
DLLNSAKSAFDAQLTAFELVSETSLGLVLKHIPATQRPTTTSPWYVLAEFSAAEPAAIEA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHH
WLAERLEAGEVSDGVVAQSEIQAKRLWALRENISEAQKIEGISIKHDISVPVSSIPAFLM
HHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
TADAALAKAFPGIRVVAFGHVGDGNLHYNLSKADAHDNAAFIASQPEVNRLVHDTVHALN
HHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHC
GSISAEHGIGQLKRDEIRRYKSSVEMALMRSIKQALDPQGLMNPGKVI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TSTPKSSDLKSILAGIVGTAQVLTDPVELAPFLTDWRGRYRGVAQCVVRPGNTAEVAAV
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHH
VKACVDAGIPIVPQGGNTSLCGAATPDQAGWAVVISLSRLNRIAAVDAKNNTISVQAGCT
HHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEEEHHHCCEEEEEECCCCEEEEECCCC
LGAVQEAARAADRLFPLALASEGTCQIGGNLSTNAGGVQVLRYGNTRELTLGLEVVLPSG
HHHHHHHHHHHHHHEEEEECCCCCEEECCCCCCCCCCEEEEEECCCEEEEEEEEEEECCC
EIWNGLRGLRKDNTGYDLKQLFIGAEGTLGIITGAVLKLFPLPKTQVTCWLNVASPNAAV
HHHHHHHHCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHH
DLLNSAKSAFDAQLTAFELVSETSLGLVLKHIPATQRPTTTSPWYVLAEFSAAEPAAIEA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHH
WLAERLEAGEVSDGVVAQSEIQAKRLWALRENISEAQKIEGISIKHDISVPVSSIPAFLM
HHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
TADAALAKAFPGIRVVAFGHVGDGNLHYNLSKADAHDNAAFIASQPEVNRLVHDTVHALN
HHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHC
GSISAEHGIGQLKRDEIRRYKSSVEMALMRSIKQALDPQGLMNPGKVI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]