Click here to switch to the map view.

The map label for this gene is yoqW [H]

Identifier: 71908298

GI number: 71908298

Start: 2881091

End: 2881756

Strand: Reverse

Name: yoqW [H]

Synonym: Daro_2685

Alternate gene names: 71908298

Gene position: 2881756-2881091 (Counterclockwise)

Preceding gene: 71908300

Following gene: 71908295

Centisome position: 64.02

GC content: 55.41

Gene sequence:

>666_bases
ATGTGCGGACGCTACGCCCTCTCAGCCACTGCCGGCCAATTGATCGAACACTTTCAGCTGCTCTCATGCCCTGATTATGA
GGTGCGCTACAACATCGCGCCGACCAGCATCATCCCGGTGATTCGCTACAAACCTGACGCTGGCAGGGTTGGCCAACTGG
TTAAATGGGGCCTGGTGCCATCATGGGCAAAGGATGCGAGTATCGGCGCCAAGCTGAATAACGCACGCGGCGAGACGGTA
GCCGAGAAGCCATCCTTCCGGACAAGTTTCGCCAAGCATCGCTGCCTGATCCCGGCTAGTGGGTTCTATGAGTGGAAAAC
GGTCGAAGGAAAGAAACAACCGTATTACATCTATCCGACTGACGGTCTCTTTGCCTTTGCCGGGCTGCTCGCCGCGTGGA
AAGCCCCAGACGGACAGACGCTCGTTACGACCTGCATCATTACCACCGAGCCAAATGAAGTGATGGTGCCGATCCACGAC
CGCATGCCGGTAATTTTGGGGGCGGATCAGTACGACGCTTGGCTTGATCCGCTAAATCACGATGTTGAAGCTCTGAAGCA
GATGATCAGGCCATGTAGTGCCGAGAGGATGACTGCTTATCCGGTGAGTCCGCTAATTAACAATGGCCGAGCTGAAGGGG
GGGGTATCGCTGAAATTGATGAATGA

Upstream 100 bases:

>100_bases
AAAAATAAACCAATTAAATTCAATCGATTATGATTTATTGATCAACAGCATATTGATGGTGTGTAAAGTATTCCGACGCA
ACAAAATGACCTGACTGCTT

Downstream 100 bases:

>100_bases
AAAAAGCCGGGAAACCCCGGCTTATCTTCAACTCAGACTCGATCAACTTTTCTTTAGGCGAGCGTAACCGAAAGCAGCTA
AGGCAAGTCCAACCAAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MCGRYALSATAGQLIEHFQLLSCPDYEVRYNIAPTSIIPVIRYKPDAGRVGQLVKWGLVPSWAKDASIGAKLNNARGETV
AEKPSFRTSFAKHRCLIPASGFYEWKTVEGKKQPYYIYPTDGLFAFAGLLAAWKAPDGQTLVTTCIITTEPNEVMVPIHD
RMPVILGADQYDAWLDPLNHDVEALKQMIRPCSAERMTAYPVSPLINNGRAEGGGIAEIDE

Sequences:

>Translated_221_residues
MCGRYALSATAGQLIEHFQLLSCPDYEVRYNIAPTSIIPVIRYKPDAGRVGQLVKWGLVPSWAKDASIGAKLNNARGETV
AEKPSFRTSFAKHRCLIPASGFYEWKTVEGKKQPYYIYPTDGLFAFAGLLAAWKAPDGQTLVTTCIITTEPNEVMVPIHD
RMPVILGADQYDAWLDPLNHDVEALKQMIRPCSAERMTAYPVSPLINNGRAEGGGIAEIDE
>Mature_221_residues
MCGRYALSATAGQLIEHFQLLSCPDYEVRYNIAPTSIIPVIRYKPDAGRVGQLVKWGLVPSWAKDASIGAKLNNARGETV
AEKPSFRTSFAKHRCLIPASGFYEWKTVEGKKQPYYIYPTDGLFAFAGLLAAWKAPDGQTLVTTCIITTEPNEVMVPIHD
RMPVILGADQYDAWLDPLNHDVEALKQMIRPCSAERMTAYPVSPLINNGRAEGGGIAEIDE

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=228, Percent_Identity=31.5789473684211, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI54607104, Length=228, Percent_Identity=31.5789473684211, Blast_Score=99, Evalue=4e-21,
Organism=Escherichia coli, GI48994894, Length=229, Percent_Identity=27.9475982532751, Blast_Score=83, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6323761, Length=239, Percent_Identity=31.3807531380753, Blast_Score=103, Evalue=2e-23,
Organism=Drosophila melanogaster, GI21355761, Length=220, Percent_Identity=31.8181818181818, Blast_Score=90, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 24386; Mature: 24386

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRYALSATAGQLIEHFQLLSCPDYEVRYNIAPTSIIPVIRYKPDAGRVGQLVKWGLVP
CCCCEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHCCCC
SWAKDASIGAKLNNARGETVAEKPSFRTSFAKHRCLIPASGFYEWKTVEGKKQPYYIYPT
CCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHCEEECCCCCCEEEEECCCCCCCEEEEEC
DGLFAFAGLLAAWKAPDGQTLVTTCIITTEPNEVMVPIHDRMPVILGADQYDAWLDPLNH
CHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCEEEEEECCCCCEEEECCCHHHHHCCCCC
DVEALKQMIRPCSAERMTAYPVSPLINNGRAEGGGIAEIDE
CHHHHHHHHCCCCCCCEEECCCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCGRYALSATAGQLIEHFQLLSCPDYEVRYNIAPTSIIPVIRYKPDAGRVGQLVKWGLVP
CCCCEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHCCCC
SWAKDASIGAKLNNARGETVAEKPSFRTSFAKHRCLIPASGFYEWKTVEGKKQPYYIYPT
CCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHCEEECCCCCCEEEEECCCCCCCEEEEEC
DGLFAFAGLLAAWKAPDGQTLVTTCIITTEPNEVMVPIHDRMPVILGADQYDAWLDPLNH
CHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCEEEEEECCCCCEEEECCCHHHHHCCCCC
DVEALKQMIRPCSAERMTAYPVSPLINNGRAEGGGIAEIDE
CHHHHHHHHCCCCCCCEEECCCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]