| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71908295
Identifier: 71908295
GI number: 71908295
Start: 2878878
End: 2879444
Strand: Reverse
Name: 71908295
Synonym: Daro_2682
Alternate gene names: NA
Gene position: 2879444-2878878 (Counterclockwise)
Preceding gene: 71908298
Following gene: 71908294
Centisome position: 63.97
GC content: 53.62
Gene sequence:
>567_bases TTGATTGACTTGTCCATGCGAAAACTACTGTTAATCGCACTCACGCTGAGTGCTGCTTCTTCTGCCTTCGCCCAATATCG CTGTGTCGAGAACGGGAAAACCACATTCACCGACAAGCCGTGCGCCAGTGATGCAACACCAGCTATCCCCAAGGGGAATA CCCCCAAAGTAATCGGCGATTCGGGCAATAGCGCCTATACGACGTGCTTTGGAGATTGGCGTGGACAAGTTCAGTATCAA GCCAGCTTTAAGGGGCAGCCGATTTCGGAAGCACACGCCGTGGTTCAGACGACCATATCGATAGACGCGCAAGGAAAAAT CACCGGTTCCTCTCCGGAGAACGGCTGCAAGATGAAGGGGCTCGCCATGCCAGGCATGACGCCGATGGTATTAAGTCTCG ACGTCACGCTTTCAGGATGTAGCTACCCAAAACTCAATCGCCGCCTGTTTGGCACGCTTGCTCTCAACGCAGCGGAGAAG CAGGTTCAATTCTGGATATACGCTCACCCTGTTGACTTGCTAAACCCCGGCTGGAGCTATGACGTCAAAGGGACGATGCG CCGATGA
Upstream 100 bases:
>100_bases TGCTCCTTTTGTTATCTCTTTGGAATATCACTTATGTCATAGTCCGTGGGGTGTGGAGTATGGAATGAAATAACTCTGTC GGTTAGTATCGATATTCCAT
Downstream 100 bases:
>100_bases GGTACATCTTTGCCGCACTCCTCACTATGGTTAGTCCTTAACCGAAATCTAATGCCAAGGGGGATTTAGGTGAAAAACGA TGATTGGCGTTTGGATTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MIDLSMRKLLLIALTLSAASSAFAQYRCVENGKTTFTDKPCASDATPAIPKGNTPKVIGDSGNSAYTTCFGDWRGQVQYQ ASFKGQPISEAHAVVQTTISIDAQGKITGSSPENGCKMKGLAMPGMTPMVLSLDVTLSGCSYPKLNRRLFGTLALNAAEK QVQFWIYAHPVDLLNPGWSYDVKGTMRR
Sequences:
>Translated_188_residues MIDLSMRKLLLIALTLSAASSAFAQYRCVENGKTTFTDKPCASDATPAIPKGNTPKVIGDSGNSAYTTCFGDWRGQVQYQ ASFKGQPISEAHAVVQTTISIDAQGKITGSSPENGCKMKGLAMPGMTPMVLSLDVTLSGCSYPKLNRRLFGTLALNAAEK QVQFWIYAHPVDLLNPGWSYDVKGTMRR >Mature_188_residues MIDLSMRKLLLIALTLSAASSAFAQYRCVENGKTTFTDKPCASDATPAIPKGNTPKVIGDSGNSAYTTCFGDWRGQVQYQ ASFKGQPISEAHAVVQTTISIDAQGKITGSSPENGCKMKGLAMPGMTPMVLSLDVTLSGCSYPKLNRRLFGTLALNAAEK QVQFWIYAHPVDLLNPGWSYDVKGTMRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20274; Mature: 20274
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLSMRKLLLIALTLSAASSAFAQYRCVENGKTTFTDKPCASDATPAIPKGNTPKVIGD CCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCCCCCCCCCCCCCCCEEEEC SGNSAYTTCFGDWRGQVQYQASFKGQPISEAHAVVQTTISIDAQGKITGSSPENGCKMKG CCCCEEEEEEECCCCEEEEEEECCCCCHHHHHEEEEEEEEECCCCEEECCCCCCCCEEEE LAMPGMTPMVLSLDVTLSGCSYPKLNRRLFGTLALNAAEKQVQFWIYAHPVDLLNPGWSY EECCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCHHHCCCCCCC DVKGTMRR CCCCCCCC >Mature Secondary Structure MIDLSMRKLLLIALTLSAASSAFAQYRCVENGKTTFTDKPCASDATPAIPKGNTPKVIGD CCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCCCCCCCCCCCCCCCEEEEC SGNSAYTTCFGDWRGQVQYQASFKGQPISEAHAVVQTTISIDAQGKITGSSPENGCKMKG CCCCEEEEEEECCCCEEEEEEECCCCCHHHHHEEEEEEEEECCCCEEECCCCCCCCEEEE LAMPGMTPMVLSLDVTLSGCSYPKLNRRLFGTLALNAAEKQVQFWIYAHPVDLLNPGWSY EECCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCHHHCCCCCCC DVKGTMRR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA