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The map label for this gene is 71908177

Identifier: 71908177

GI number: 71908177

Start: 2759985

End: 2761322

Strand: Reverse

Name: 71908177

Synonym: Daro_2561

Alternate gene names: NA

Gene position: 2761322-2759985 (Counterclockwise)

Preceding gene: 71908178

Following gene: 71908174

Centisome position: 61.35

GC content: 61.51

Gene sequence:

>1338_bases
ATGATCCGCATCGCGCATTTCTCCGATCTGCACTACGGCACAAAAAACCGGGTGGAGGCGGATCGCTGTTTCGGCGCCGC
CATCGACCGGGCCATTGCCCTGGGGGTAGAAGCAGCCGTGCTGTCGGGGGATGCCACCGACCATGCACTGGACTTGCATG
CACCGGCCGCCGAACGACTGTTCGCCCAGGTGCGGCGACTGGCCGAGCATTGTCCGGTGCTGATGCTGCAAGGTACGTTT
TCACATGAGCCGCCGGGTACCCTGGCTATTTTCAAGCTGCTGGGCGGTCGCTATCCGGTGCATGTGGCCGAGCGTATTGA
ACAAGTGGCACTCACCGCCCAGGGGCAATGGCTTGTTTCGACAGGCTGGTGCTTCGACCAACTGCCGGCCGGTGCTCGTG
CCTTATTCTCCTGTGTACCCACGGTGAACAAGGCGGTGGTCGCCGCAGCGGTCGGTGCGGCGGATGCAGCACAGGCAGTT
GGCGAGCACCTGGCCGTCTTGTTGCGCGGCTTTGTGCCGACCAATCGGGCCGCACAGTTGCAAGGCCTGCCCACCATTGG
CATCTCGCACGGCACCGTATTCGGCTGCTTGAGCGAGCACGGCGTGCCAATGGCCGGCTTCGATCATGAATTCACCACCG
GGGCGCTGTTCGCAGCCGAGGCGCAGGCCTTCATGCTTGGGCATATCCATCGGCATCAATTCTGGGAACAGGCGGGCAAG
GCTGGTCGGCAGTGCATTGCCTATCCCGGTTCCATCGGCCGTTTTCACTACGGCGAAGAAGGTGAGAAGGGGTTTCTGGT
GTGGGAAGTCGATTCCGATCAGGCACGCTTTGCACTGGCGCCGACGCCAGCCCGTCGAACGGTCGACGTTGTGTTCGACG
GCAAACCAGACCTCGAGGAACTCCGCGCTGCCATCGCCCAACAGGATATCGCCAGTGCCTTCGTGCGGGTGCGCTGGACG
GTTGCCGATGAAGATCGTCATCAAGTCGACCGTCGGGCGATTTTGCGCTTGCTGGAGGGGGCGGCGGAAACCAAGTTAGA
AGGGCGCATCGTACCGGTGGTACGGACACGGGCAGCCGGTATCTCGCAGTTGGCGCAGATGGAAGACAAGGTGCGAGTAT
GGGCGCAGGTAACCGAGATCAGAGTGGAGCCACTGCTCGACTGTCTTGAGGCGCTGGCAACCCAGAACCCTGAACAGCTT
GCTGATCGTTTGCTTGACGGTGGTCGTTGCGCGCCTCCGCTGCCTGCCTGTGATGAGGCGAGACCTATGCCAAGTATTCC
GCTACTGGAACACACACCCAGAGATGGGCACCAGTCGGCAATACTGGAACTATTTTGA

Upstream 100 bases:

>100_bases
CCCAGGCTTGGAATGAACTGGAGCGCTACAGCAACGATCCACAGGGCTACCGTGACAAGATCGAGAGCGAAATGCAGTTG
GTGTCGCGGGGGAGAACGGC

Downstream 100 bases:

>100_bases
AGCGTGAGTATTGCCCAGGCGGTGTTACGTCGTATTCGTGGCGTATTCCAGAAACTCCACGAGAGGAGATCGGGCTTCAT
CCCAACGGCGCCGATATCCT

Product: DNA repair exonuclease-like protein

Products: NA

Alternate protein names: Nuclease SbcCD; Nuclease SbcCD D Subunit; DNA Exonuclease; Metallophosphoesterase

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MIRIAHFSDLHYGTKNRVEADRCFGAAIDRAIALGVEAAVLSGDATDHALDLHAPAAERLFAQVRRLAEHCPVLMLQGTF
SHEPPGTLAIFKLLGGRYPVHVAERIEQVALTAQGQWLVSTGWCFDQLPAGARALFSCVPTVNKAVVAAAVGAADAAQAV
GEHLAVLLRGFVPTNRAAQLQGLPTIGISHGTVFGCLSEHGVPMAGFDHEFTTGALFAAEAQAFMLGHIHRHQFWEQAGK
AGRQCIAYPGSIGRFHYGEEGEKGFLVWEVDSDQARFALAPTPARRTVDVVFDGKPDLEELRAAIAQQDIASAFVRVRWT
VADEDRHQVDRRAILRLLEGAAETKLEGRIVPVVRTRAAGISQLAQMEDKVRVWAQVTEIRVEPLLDCLEALATQNPEQL
ADRLLDGGRCAPPLPACDEARPMPSIPLLEHTPRDGHQSAILELF

Sequences:

>Translated_445_residues
MIRIAHFSDLHYGTKNRVEADRCFGAAIDRAIALGVEAAVLSGDATDHALDLHAPAAERLFAQVRRLAEHCPVLMLQGTF
SHEPPGTLAIFKLLGGRYPVHVAERIEQVALTAQGQWLVSTGWCFDQLPAGARALFSCVPTVNKAVVAAAVGAADAAQAV
GEHLAVLLRGFVPTNRAAQLQGLPTIGISHGTVFGCLSEHGVPMAGFDHEFTTGALFAAEAQAFMLGHIHRHQFWEQAGK
AGRQCIAYPGSIGRFHYGEEGEKGFLVWEVDSDQARFALAPTPARRTVDVVFDGKPDLEELRAAIAQQDIASAFVRVRWT
VADEDRHQVDRRAILRLLEGAAETKLEGRIVPVVRTRAAGISQLAQMEDKVRVWAQVTEIRVEPLLDCLEALATQNPEQL
ADRLLDGGRCAPPLPACDEARPMPSIPLLEHTPRDGHQSAILELF
>Mature_445_residues
MIRIAHFSDLHYGTKNRVEADRCFGAAIDRAIALGVEAAVLSGDATDHALDLHAPAAERLFAQVRRLAEHCPVLMLQGTF
SHEPPGTLAIFKLLGGRYPVHVAERIEQVALTAQGQWLVSTGWCFDQLPAGARALFSCVPTVNKAVVAAAVGAADAAQAV
GEHLAVLLRGFVPTNRAAQLQGLPTIGISHGTVFGCLSEHGVPMAGFDHEFTTGALFAAEAQAFMLGHIHRHQFWEQAGK
AGRQCIAYPGSIGRFHYGEEGEKGFLVWEVDSDQARFALAPTPARRTVDVVFDGKPDLEELRAAIAQQDIASAFVRVRWT
VADEDRHQVDRRAILRLLEGAAETKLEGRIVPVVRTRAAGISQLAQMEDKVRVWAQVTEIRVEPLLDCLEALATQNPEQL
ADRLLDGGRCAPPLPACDEARPMPSIPLLEHTPRDGHQSAILELF

Specific function: Unknown

COG id: COG0420

COG function: function code L; DNA repair exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48304; Mature: 48304

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRIAHFSDLHYGTKNRVEADRCFGAAIDRAIALGVEAAVLSGDATDHALDLHAPAAERL
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEECCCCHHHHH
FAQVRRLAEHCPVLMLQGTFSHEPPGTLAIFKLLGGRYPVHVAERIEQVALTAQGQWLVS
HHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEE
TGWCFDQLPAGARALFSCVPTVNKAVVAAAVGAADAAQAVGEHLAVLLRGFVPTNRAAQL
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
QGLPTIGISHGTVFGCLSEHGVPMAGFDHEFTTGALFAAEAQAFMLGHIHRHQFWEQAGK
CCCCEECCCCCHHEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AGRQCIAYPGSIGRFHYGEEGEKGFLVWEVDSDQARFALAPTPARRTVDVVFDGKPDLEE
HCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECCCCCHHH
LRAAIAQQDIASAFVRVRWTVADEDRHQVDRRAILRLLEGAAETKLEGRIVPVVRTRAAG
HHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH
ISQLAQMEDKVRVWAQVTEIRVEPLLDCLEALATQNPEQLADRLLDGGRCAPPLPACDEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC
RPMPSIPLLEHTPRDGHQSAILELF
CCCCCCCCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MIRIAHFSDLHYGTKNRVEADRCFGAAIDRAIALGVEAAVLSGDATDHALDLHAPAAERL
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEECCCCHHHHH
FAQVRRLAEHCPVLMLQGTFSHEPPGTLAIFKLLGGRYPVHVAERIEQVALTAQGQWLVS
HHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEE
TGWCFDQLPAGARALFSCVPTVNKAVVAAAVGAADAAQAVGEHLAVLLRGFVPTNRAAQL
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
QGLPTIGISHGTVFGCLSEHGVPMAGFDHEFTTGALFAAEAQAFMLGHIHRHQFWEQAGK
CCCCEECCCCCHHEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AGRQCIAYPGSIGRFHYGEEGEKGFLVWEVDSDQARFALAPTPARRTVDVVFDGKPDLEE
HCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEEECCCCCHHH
LRAAIAQQDIASAFVRVRWTVADEDRHQVDRRAILRLLEGAAETKLEGRIVPVVRTRAAG
HHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH
ISQLAQMEDKVRVWAQVTEIRVEPLLDCLEALATQNPEQLADRLLDGGRCAPPLPACDEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC
RPMPSIPLLEHTPRDGHQSAILELF
CCCCCCCCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA