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The map label for this gene is dsbD [C]

Identifier: 71907898

GI number: 71907898

Start: 2464152

End: 2464856

Strand: Reverse

Name: dsbD [C]

Synonym: Daro_2278

Alternate gene names: 71907898

Gene position: 2464856-2464152 (Counterclockwise)

Preceding gene: 71907899

Following gene: 71907879

Centisome position: 54.76

GC content: 65.39

Gene sequence:

>705_bases
GTGGACAGCTTTGCCGACTGGCTGACGCCCTGGCTGCAAAGCGGCTCGCCGCTCCTGATTCCACTGGTCCTCTTGGGCGG
ATTGGCCACCGCCCTCAATCCCTGTTGCCTGCCCATGTACCCCGCCGCCCTCGGCTACCTGGGACAAACTGGGCTGCACC
CGGAAGCCGGCGCCAAGTCGGGCCGGATCGCCTTCGCCTTCATAGCCGGCATGGCCACCGCCACGACCGTCATGGGCGTG
GCGACGGCTTCGTTTGGCTGGGTCTTTGGACAGCTGCCAGTGCCCCTGCGGCTGTTCCTCGCGGTGTTGCCCTTCGTGAT
GGGACTCGATCTCCTTGGCGTGATCCGGCTGCATCCGGCCTTATACGTTCCCTGGCTGTCCCGCACCTCGCCTCTGAAGC
AATTCGTCCCCCGGATGGGCCACGCCTTCGTGGTCGGCTTCCTCTTCACCCTGGCCATTGCGCCCTGCGCGACCCCCATC
CTCATCGGCATCCTCAGTGCCATCGCCATGAGCGGCAGCCCGCGCTACGGGGCGGCGTTGATGTTCCTTTACGGCCTCGG
TGCCGGATTGCCCTTGCTCGCCGTTGCGCGAGGCGCCCATCTCATGGGTCAACGGCTTATTTCGTCTCGCGCCCGGCGCG
CCGTGAATGCGATCCTAGGTGGCATGCTCGTCGTCCTTGGCCTGTTCCTGCTATGGAAAACGTAA

Upstream 100 bases:

>100_bases
CGGCCGCGAGCGCAAGCGCATCATCGGTGAGAGCGCTGCTGTACAGGCCGCGCTACGGCAATCTCTCGCCAACGCCGAAA
CCCTGCTGCGCGAGTAGGCT

Downstream 100 bases:

>100_bases
TCGGCGTCCCCACAGAATTCGAAAAAATCGTACGATGAGACTTGGCGCTGCTGCGTAGTGGCCGAAACGAAAGTTCGGCG
TTGTATTTTGTCGCTGACGG

Product: cytochrome c biogenesis protein, transmembrane region

Products: DsbDoxidized; DsbGreduced [C]

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MDSFADWLTPWLQSGSPLLIPLVLLGGLATALNPCCLPMYPAALGYLGQTGLHPEAGAKSGRIAFAFIAGMATATTVMGV
ATASFGWVFGQLPVPLRLFLAVLPFVMGLDLLGVIRLHPALYVPWLSRTSPLKQFVPRMGHAFVVGFLFTLAIAPCATPI
LIGILSAIAMSGSPRYGAALMFLYGLGAGLPLLAVARGAHLMGQRLISSRARRAVNAILGGMLVVLGLFLLWKT

Sequences:

>Translated_234_residues
MDSFADWLTPWLQSGSPLLIPLVLLGGLATALNPCCLPMYPAALGYLGQTGLHPEAGAKSGRIAFAFIAGMATATTVMGV
ATASFGWVFGQLPVPLRLFLAVLPFVMGLDLLGVIRLHPALYVPWLSRTSPLKQFVPRMGHAFVVGFLFTLAIAPCATPI
LIGILSAIAMSGSPRYGAALMFLYGLGAGLPLLAVARGAHLMGQRLISSRARRAVNAILGGMLVVLGLFLLWKT
>Mature_234_residues
MDSFADWLTPWLQSGSPLLIPLVLLGGLATALNPCCLPMYPAALGYLGQTGLHPEAGAKSGRIAFAFIAGMATATTVMGV
ATASFGWVFGQLPVPLRLFLAVLPFVMGLDLLGVIRLHPALYVPWLSRTSPLKQFVPRMGHAFVVGFLFTLAIAPCATPI
LIGILSAIAMSGSPRYGAALMFLYGLGAGLPLLAVARGAHLMGQRLISSRARRAVNAILGGMLVVLGLFLLWKT

Specific function: Could be involved in cytochrome c synthesis [H]

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

Organism=Escherichia coli, GI1790578, Length=216, Percent_Identity=31.9444444444444, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: 1.8.1.8 [C]

Molecular weight: Translated: 24640; Mature: 24640

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSFADWLTPWLQSGSPLLIPLVLLGGLATALNPCCLPMYPAALGYLGQTGLHPEAGAKS
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC
GRIAFAFIAGMATATTVMGVATASFGWVFGQLPVPLRLFLAVLPFVMGLDLLGVIRLHPA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYVPWLSRTSPLKQFVPRMGHAFVVGFLFTLAIAPCATPILIGILSAIAMSGSPRYGAAL
HHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
MFLYGLGAGLPLLAVARGAHLMGQRLISSRARRAVNAILGGMLVVLGLFLLWKT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDSFADWLTPWLQSGSPLLIPLVLLGGLATALNPCCLPMYPAALGYLGQTGLHPEAGAKS
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC
GRIAFAFIAGMATATTVMGVATASFGWVFGQLPVPLRLFLAVLPFVMGLDLLGVIRLHPA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYVPWLSRTSPLKQFVPRMGHAFVVGFLFTLAIAPCATPILIGILSAIAMSGSPRYGAAL
HHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
MFLYGLGAGLPLLAVARGAHLMGQRLISSRARRAVNAILGGMLVVLGLFLLWKT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DsbGoxidized; DsbDreduced/thiol:disulfide reductase [C]

Specific reaction: DsbDreduced/thiol:disulfide reductase + DsbCoxidized = DsbDoxidized + DsbCreduced DsbGoxidized + DsbDreduced/thiol:disulfide reductase = DsbGreduced + DsbDoxidized [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]