| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is 71907839
Identifier: 71907839
GI number: 71907839
Start: 2392825
End: 2393868
Strand: Reverse
Name: 71907839
Synonym: Daro_2217
Alternate gene names: NA
Gene position: 2393868-2392825 (Counterclockwise)
Preceding gene: 71907841
Following gene: 71907838
Centisome position: 53.18
GC content: 62.74
Gene sequence:
>1044_bases ATGGAATTGATAGTCAGAGCGGTGGATGTCGGATCCGGCAACACCAAATTCGTCACGGCCGCAGCCGGTACCGATATCCG CTGCGCCAGTTTCCCGTCCGTCGCCTATCCGTCGAGCGACGACTCGCCGTCGTGGCCGGCGAGCGAGCGCAAGAAAACCG TGTGTATCCCCATCGGCCCGCTGTTCTATGAGGTCGGGCCGGACGTGAGCCTTGCCGCCGATACCTTTCGCGCCAAACAA CTGCATGATGAATACACCGAGACGCCGGAGTACATGGCGTTGCTGCGCGGAGCCCTTTCGATGATGAAGGTGAGCCACAT CGACCTCCTTGTGGTGGGGCTGCCGGTGGCACTCTTCACGGTCAAGAAATCGGCGCTGGAGAAAGCCATGACCGGCCGGC ACGACATCGGGAACAATAAGGTCGTGACCGTGGGCAAGGCGATGGCCGTGCCTCAGCCGCAGGGGGCGCTGGTGCACTAC GCTTCTGAGCACCAGAAGATGGTGGAGATCGGCAACGAGCAGAGCCTGATCATCGACCCGGGGTCCCGCACCTTCGACTG GCTGGTGGCCCGGGGCATGCGTTTCGTCCAGAAGCAGAGCTACTCCTTCAACCGCGGCATGTCGGACGTGCTGCGCTTGC TGGCGGCCGAGATCACCAAGGACATCGGCTCGCCCTACCGCGATTACGACGCCATCGACCTGGCGCTGCGCACGGGCAAG CAGCCGCTGATCTTCCAGAAGCCGTACGACATGAAGCGCCTGCTGCCCCTGGCCGAGACCGTCGCCGAGCAGGCCGTGTC GACGATGAAGGAGTGGATCGAGGCACCACACAGCCTGCAGAACATCATCCTGGTCGGCGGCGGGGCGTTCCTGTTCAGGA AGGCGGTGAAGGCGGCGTTCCCAAAGCACCGCATCCACGAGGTGAAGGAACCGATGTTCGCCAATGTGCGGGGTTTTCAG CTGGCCGGACAGAACTACGCCCGCAGCAAGATGACCGCCACCGATAGGGGGCAAGTTCAGGGTGCATCGGGAGAACTCGA ATGA
Upstream 100 bases:
>100_bases CCGATGCCGAAATCGGCCTTTTTGAGTGGGGATTCCGTGTGGCGGGATCAGATCGCCCTGTCGATGCTGATCGACCTGAA ACCTATCTCGGAGCCTTGCT
Downstream 100 bases:
>100_bases GCACCAATACCGTGAAGGACACCGTGCCCATTCGCCTGGTCTTCGTATTGGCGCGTGCCGACCATCCCCGTCTGTACGAC GATCTGATCCAGTTTCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MELIVRAVDVGSGNTKFVTAAAGTDIRCASFPSVAYPSSDDSPSWPASERKKTVCIPIGPLFYEVGPDVSLAADTFRAKQ LHDEYTETPEYMALLRGALSMMKVSHIDLLVVGLPVALFTVKKSALEKAMTGRHDIGNNKVVTVGKAMAVPQPQGALVHY ASEHQKMVEIGNEQSLIIDPGSRTFDWLVARGMRFVQKQSYSFNRGMSDVLRLLAAEITKDIGSPYRDYDAIDLALRTGK QPLIFQKPYDMKRLLPLAETVAEQAVSTMKEWIEAPHSLQNIILVGGGAFLFRKAVKAAFPKHRIHEVKEPMFANVRGFQ LAGQNYARSKMTATDRGQVQGASGELE
Sequences:
>Translated_347_residues MELIVRAVDVGSGNTKFVTAAAGTDIRCASFPSVAYPSSDDSPSWPASERKKTVCIPIGPLFYEVGPDVSLAADTFRAKQ LHDEYTETPEYMALLRGALSMMKVSHIDLLVVGLPVALFTVKKSALEKAMTGRHDIGNNKVVTVGKAMAVPQPQGALVHY ASEHQKMVEIGNEQSLIIDPGSRTFDWLVARGMRFVQKQSYSFNRGMSDVLRLLAAEITKDIGSPYRDYDAIDLALRTGK QPLIFQKPYDMKRLLPLAETVAEQAVSTMKEWIEAPHSLQNIILVGGGAFLFRKAVKAAFPKHRIHEVKEPMFANVRGFQ LAGQNYARSKMTATDRGQVQGASGELE >Mature_347_residues MELIVRAVDVGSGNTKFVTAAAGTDIRCASFPSVAYPSSDDSPSWPASERKKTVCIPIGPLFYEVGPDVSLAADTFRAKQ LHDEYTETPEYMALLRGALSMMKVSHIDLLVVGLPVALFTVKKSALEKAMTGRHDIGNNKVVTVGKAMAVPQPQGALVHY ASEHQKMVEIGNEQSLIIDPGSRTFDWLVARGMRFVQKQSYSFNRGMSDVLRLLAAEITKDIGSPYRDYDAIDLALRTGK QPLIFQKPYDMKRLLPLAETVAEQAVSTMKEWIEAPHSLQNIILVGGGAFLFRKAVKAAFPKHRIHEVKEPMFANVRGFQ LAGQNYARSKMTATDRGQVQGASGELE
Specific function: Unknown
COG id: COG1077
COG function: function code D; Actin-like ATPase involved in cell morphogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38128; Mature: 38128
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELIVRAVDVGSGNTKFVTAAAGTDIRCASFPSVAYPSSDDSPSWPASERKKTVCIPIGP CCEEEEEEECCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECH LFYEVGPDVSLAADTFRAKQLHDEYTETPEYMALLRGALSMMKVSHIDLLVVGLPVALFT HHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKKSALEKAMTGRHDIGNNKVVTVGKAMAVPQPQGALVHYASEHQKMVEIGNEQSLIIDP HHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCCCEEEECC GSRTFDWLVARGMRFVQKQSYSFNRGMSDVLRLLAAEITKDIGSPYRDYDAIDLALRTGK CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC QPLIFQKPYDMKRLLPLAETVAEQAVSTMKEWIEAPHSLQNIILVGGGAFLFRKAVKAAF CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHC PKHRIHEVKEPMFANVRGFQLAGQNYARSKMTATDRGQVQGASGELE CHHHHHHHHCHHHCCCCCEEECCCCHHHHHCCCCCCCCEECCCCCCC >Mature Secondary Structure MELIVRAVDVGSGNTKFVTAAAGTDIRCASFPSVAYPSSDDSPSWPASERKKTVCIPIGP CCEEEEEEECCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECH LFYEVGPDVSLAADTFRAKQLHDEYTETPEYMALLRGALSMMKVSHIDLLVVGLPVALFT HHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKKSALEKAMTGRHDIGNNKVVTVGKAMAVPQPQGALVHYASEHQKMVEIGNEQSLIIDP HHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCCCEEEECC GSRTFDWLVARGMRFVQKQSYSFNRGMSDVLRLLAAEITKDIGSPYRDYDAIDLALRTGK CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC QPLIFQKPYDMKRLLPLAETVAEQAVSTMKEWIEAPHSLQNIILVGGGAFLFRKAVKAAF CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHC PKHRIHEVKEPMFANVRGFQLAGQNYARSKMTATDRGQVQGASGELE CHHHHHHHHCHHHCCCCCEEECCCCHHHHHCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA