| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907833
Identifier: 71907833
GI number: 71907833
Start: 2387253
End: 2389205
Strand: Reverse
Name: 71907833
Synonym: Daro_2211
Alternate gene names: NA
Gene position: 2389205-2387253 (Counterclockwise)
Preceding gene: 71907834
Following gene: 71907832
Centisome position: 53.08
GC content: 58.99
Gene sequence:
>1953_bases ATGATCCTGACTGACAACGAAACCAAGATCGATCTGCTGAACAATGAGGCGATCGCGACGACGATTATCGGGTTGTTGCG TGAGAAGCCAGACCGCCCCGTGACGATCGGCGTCCATGGCGACTGGGGCGCTGGGAAGTCCAGCGTGCTGGAGATGATCG AGGCCGGGTTCGCGGGCAACAAGGACGTCCTGTGCCTCAAGTTCAACGGTTGGCGGTTCCAGGGCTTCGAGGATGCAAAG ATCGCCCTGATCGAAGGCATCGTTACAGGGCTTGTCGAAAAGAGACCCGCGCTGAGCAAGGCCGCGGGTGCAGTCAAAGA CGTTTTCAAGCGGATCGACTGGCTGAAGGTCGCAAAGAACGCGGGTGGCTTGGCATTGACAGCCTTTACGGGCATCCCGA CGCTTGATCAGGTCGGCGCGATTGTGGGCAGCCTCGAAGGGATGCTGTCGAACCCTGGCCAGCTCGCGACCAAGGAGAAC CTCAGTTCCGCGATCGAGGGCGTGAAGGCTGTATTGAAGCCGTCAGAATCCAAAAACGTCCCCGAGGAGGTCGAGGCATT TCGCAAGGCTTTCGACAACCTGTTGAAGGAAGCGGGCGTTGATCAGCTTGTCGTGCTTATCGATGACCTCGATCGGTGCT TGCCAGATACGGCGATCGAGACGCTCGAAGCGATACGGCTGTTCGTCTTCACGGCCCGTACCGCATTTGTGGTGGCCGCT GACGAGGCCATGATCGAGTATGCGGTGCGCAAGCACTTTCCGGACTTGCCGGACACCACGGGTCCGCGTGACTATGCCCG CAACTATCTTGAGAAGCTAATCCAGATTCCTTTTCGCATTCCGGCGTTGGGCGAGACGGAGACTCGCATCTACGTCACCC TTCTTCTGGCAGGGGCAGAGTTGGGTGAAGAAGATCCCGGATACGGTGAACTGATCAAGGCGGCGCGAACACGACTGAAG CGACCGTGGGAGAGCGCACCGCTGGACGCCGCCGCCGTAAGTGCGGCGCTTGGTCAGAATGCCAACAAGGCACACAACGC GCTGATCCTGAGTGATCAGATCGGTCCGATTCTGGCCAGCGGCGCCAAAGGCAACCCGCGGCAGATCAAGCGATTCCTCA ACACGCTGTTGTTGCGGCAGAAGATGGCTGAGGCTCGTGGTTTTGGCGAGGAAATCAAGCTGCCGGTGCTGGCGAAGTTG ATGCTCGCTGAGCGGTTTCTACCCAGTCTGTTCGATCAGATTGCTACTGTTGCGGTGACAGATTCGAAGGGGCACTGCGC GGATCTGGTGATGTTGGAAAAGGTCGACACGCCCGAGAGCTCCAGATCACCCACGAAGACCAAGCCGGCGGATGCGACTG AGGCCAAAAGTGGCGCGGTGCAGGCCAAATCAGAAAGCGCGTTACTCGCGGAATGGAAGTCGTCAGAGGCCATCCTTGCT TGGGCTCGGGTGCTGCCTCCCGTGGCGGACATCGATCTACGGCCGTACCTGTTCGCGACCAAGGACAAGAAGGACTACTT CGGGCCAGCTTCGGTGCTTGGCCATTTGGCGGCGGTCGCGGAGAAATTGCTTGGTCCCAAGATCTCCGTCCAGGCATTGG AGTCCGAGCTGAAGCAACTTGCTCAACCGGAAGCGGCGAAGCTGTTTGAAGCTGTTCGGGCCAAGATCGTGAGCGGGGAC AGCTTTGACACGCAACCTGCCGGTGTAGACGGCATGATTGTGCTGGTGAGGGCGCAACCGAGTCTGCAGGGAAGCCTGGT TAATTTTCTGCAAGCGCTGCCAACCGGTCGATGTGGTCCTTGGGTGGTCAGTGGCTGGCAAGGGGCACTCAAGGACACTG ATGCGCAGGCACGAATGGCTCAGTTGGTCGTCGGGTGGGCAACGCAGTCCGACAACAAGATGCTAAGGGCCGCTGCCGAG GCTGCGAATAAGACACAAAAGGGAGGCAGATAA
Upstream 100 bases:
>100_bases GATGACTGGTTGCGCAAGAGCGTCGGGGCGGAGACAGCCGCGCGGTTGAGGCCGAAGACAAAGGGGACGGTGTGATGTTC CAGAAGAATGAGGGAGACCA
Downstream 100 bases:
>100_bases TGGGAACCTCAACAGCATACGGCGGACCAGGAGGGGGCACGCCGCTCGTGCCGTCATGGCTCGGTTCGGACGATGATGCG GGCGGGCCGGCCCCACCAGC
Product: KAP P-loop
Products: NA
Alternate protein names: KAP P-Loop Domain Protein; KAP P-Loop; KAP Family P-Loop Domain Protein; P-Loop ATPase; Kap P-Loop; ATPase
Number of amino acids: Translated: 650; Mature: 650
Protein sequence:
>650_residues MILTDNETKIDLLNNEAIATTIIGLLREKPDRPVTIGVHGDWGAGKSSVLEMIEAGFAGNKDVLCLKFNGWRFQGFEDAK IALIEGIVTGLVEKRPALSKAAGAVKDVFKRIDWLKVAKNAGGLALTAFTGIPTLDQVGAIVGSLEGMLSNPGQLATKEN LSSAIEGVKAVLKPSESKNVPEEVEAFRKAFDNLLKEAGVDQLVVLIDDLDRCLPDTAIETLEAIRLFVFTARTAFVVAA DEAMIEYAVRKHFPDLPDTTGPRDYARNYLEKLIQIPFRIPALGETETRIYVTLLLAGAELGEEDPGYGELIKAARTRLK RPWESAPLDAAAVSAALGQNANKAHNALILSDQIGPILASGAKGNPRQIKRFLNTLLLRQKMAEARGFGEEIKLPVLAKL MLAERFLPSLFDQIATVAVTDSKGHCADLVMLEKVDTPESSRSPTKTKPADATEAKSGAVQAKSESALLAEWKSSEAILA WARVLPPVADIDLRPYLFATKDKKDYFGPASVLGHLAAVAEKLLGPKISVQALESELKQLAQPEAAKLFEAVRAKIVSGD SFDTQPAGVDGMIVLVRAQPSLQGSLVNFLQALPTGRCGPWVVSGWQGALKDTDAQARMAQLVVGWATQSDNKMLRAAAE AANKTQKGGR
Sequences:
>Translated_650_residues MILTDNETKIDLLNNEAIATTIIGLLREKPDRPVTIGVHGDWGAGKSSVLEMIEAGFAGNKDVLCLKFNGWRFQGFEDAK IALIEGIVTGLVEKRPALSKAAGAVKDVFKRIDWLKVAKNAGGLALTAFTGIPTLDQVGAIVGSLEGMLSNPGQLATKEN LSSAIEGVKAVLKPSESKNVPEEVEAFRKAFDNLLKEAGVDQLVVLIDDLDRCLPDTAIETLEAIRLFVFTARTAFVVAA DEAMIEYAVRKHFPDLPDTTGPRDYARNYLEKLIQIPFRIPALGETETRIYVTLLLAGAELGEEDPGYGELIKAARTRLK RPWESAPLDAAAVSAALGQNANKAHNALILSDQIGPILASGAKGNPRQIKRFLNTLLLRQKMAEARGFGEEIKLPVLAKL MLAERFLPSLFDQIATVAVTDSKGHCADLVMLEKVDTPESSRSPTKTKPADATEAKSGAVQAKSESALLAEWKSSEAILA WARVLPPVADIDLRPYLFATKDKKDYFGPASVLGHLAAVAEKLLGPKISVQALESELKQLAQPEAAKLFEAVRAKIVSGD SFDTQPAGVDGMIVLVRAQPSLQGSLVNFLQALPTGRCGPWVVSGWQGALKDTDAQARMAQLVVGWATQSDNKMLRAAAE AANKTQKGGR >Mature_650_residues MILTDNETKIDLLNNEAIATTIIGLLREKPDRPVTIGVHGDWGAGKSSVLEMIEAGFAGNKDVLCLKFNGWRFQGFEDAK IALIEGIVTGLVEKRPALSKAAGAVKDVFKRIDWLKVAKNAGGLALTAFTGIPTLDQVGAIVGSLEGMLSNPGQLATKEN LSSAIEGVKAVLKPSESKNVPEEVEAFRKAFDNLLKEAGVDQLVVLIDDLDRCLPDTAIETLEAIRLFVFTARTAFVVAA DEAMIEYAVRKHFPDLPDTTGPRDYARNYLEKLIQIPFRIPALGETETRIYVTLLLAGAELGEEDPGYGELIKAARTRLK RPWESAPLDAAAVSAALGQNANKAHNALILSDQIGPILASGAKGNPRQIKRFLNTLLLRQKMAEARGFGEEIKLPVLAKL MLAERFLPSLFDQIATVAVTDSKGHCADLVMLEKVDTPESSRSPTKTKPADATEAKSGAVQAKSESALLAEWKSSEAILA WARVLPPVADIDLRPYLFATKDKKDYFGPASVLGHLAAVAEKLLGPKISVQALESELKQLAQPEAAKLFEAVRAKIVSGD SFDTQPAGVDGMIVLVRAQPSLQGSLVNFLQALPTGRCGPWVVSGWQGALKDTDAQARMAQLVVGWATQSDNKMLRAAAE AANKTQKGGR
Specific function: Unknown
COG id: COG4928
COG function: function code R; Predicted P-loop ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69876; Mature: 69876
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTDNETKIDLLNNEAIATTIIGLLREKPDRPVTIGVHGDWGAGKSSVLEMIEAGFAGN CEECCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCC KDVLCLKFNGWRFQGFEDAKIALIEGIVTGLVEKRPALSKAAGAVKDVFKRIDWLKVAKN CCEEEEEECCEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC AGGLALTAFTGIPTLDQVGAIVGSLEGMLSNPGQLATKENLSSAIEGVKAVLKPSESKNV CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC PEEVEAFRKAFDNLLKEAGVDQLVVLIDDLDRCLPDTAIETLEAIRLFVFTARTAFVVAA CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEC DEAMIEYAVRKHFPDLPDTTGPRDYARNYLEKLIQIPFRIPALGETETRIYVTLLLAGAE HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEHHHH LGEEDPGYGELIKAARTRLKRPWESAPLDAAAVSAALGQNANKAHNALILSDQIGPILAS CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHC GAKGNPRQIKRFLNTLLLRQKMAEARGFGEEIKLPVLAKLMLAERFLPSLFDQIATVAVT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEE DSKGHCADLVMLEKVDTPESSRSPTKTKPADATEAKSGAVQAKSESALLAEWKSSEAILA CCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHCCCHHHHH WARVLPPVADIDLRPYLFATKDKKDYFGPASVLGHLAAVAEKLLGPKISVQALESELKQL HHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AQPEAAKLFEAVRAKIVSGDSFDTQPAGVDGMIVLVRAQPSLQGSLVNFLQALPTGRCGP HCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCC WVVSGWQGALKDTDAQARMAQLVVGWATQSDNKMLRAAAEAANKTQKGGR CEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MILTDNETKIDLLNNEAIATTIIGLLREKPDRPVTIGVHGDWGAGKSSVLEMIEAGFAGN CEECCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCC KDVLCLKFNGWRFQGFEDAKIALIEGIVTGLVEKRPALSKAAGAVKDVFKRIDWLKVAKN CCEEEEEECCEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC AGGLALTAFTGIPTLDQVGAIVGSLEGMLSNPGQLATKENLSSAIEGVKAVLKPSESKNV CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC PEEVEAFRKAFDNLLKEAGVDQLVVLIDDLDRCLPDTAIETLEAIRLFVFTARTAFVVAA CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEC DEAMIEYAVRKHFPDLPDTTGPRDYARNYLEKLIQIPFRIPALGETETRIYVTLLLAGAE HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEHHHH LGEEDPGYGELIKAARTRLKRPWESAPLDAAAVSAALGQNANKAHNALILSDQIGPILAS CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHC GAKGNPRQIKRFLNTLLLRQKMAEARGFGEEIKLPVLAKLMLAERFLPSLFDQIATVAVT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEE DSKGHCADLVMLEKVDTPESSRSPTKTKPADATEAKSGAVQAKSESALLAEWKSSEAILA CCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHCCCHHHHH WARVLPPVADIDLRPYLFATKDKKDYFGPASVLGHLAAVAEKLLGPKISVQALESELKQL HHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AQPEAAKLFEAVRAKIVSGDSFDTQPAGVDGMIVLVRAQPSLQGSLVNFLQALPTGRCGP HCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCC WVVSGWQGALKDTDAQARMAQLVVGWATQSDNKMLRAAAEAANKTQKGGR CEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA