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The map label for this gene is yrkC [H]

Identifier: 71907702

GI number: 71907702

Start: 2233835

End: 2234242

Strand: Reverse

Name: yrkC [H]

Synonym: Daro_2075

Alternate gene names: 71907702

Gene position: 2234242-2233835 (Counterclockwise)

Preceding gene: 71907703

Following gene: 71907699

Centisome position: 49.64

GC content: 53.92

Gene sequence:

>408_bases
ATGAACGGTTTTGTTCAGGATATTCAAAAACTCGCCCTTGAAAATGACGACTTTCGCCAGGTGTTGTACACGGCAAAGAA
TTCCCAACTGGTCCTGATGTCGCTGAAACCGCAGGAGGACATCGGCGCGGAAATTCACAAGGTGGATCAGTTCTTCCGCG
TTGAGGAAGGCACTGGCGAGGCAGTTCTGAACGGGGCCCGAACGCCGATTCAAGCCGGCTTCGCAGTGCTCGTCCCGGCC
GGGGTGAATCACAACATCATCAATACCGGCACGGTGCCGCTCAAACTTTATACGCTCTATGCCCCGCCCAACCATCGCGA
TGGGGTCATCCACAAAAGCCGTTCAGATGCCGAGGGTGATGCCGAGCATTTCAACGGCAAAACGACTGAACAACGGAGTA
TCAAATGA

Upstream 100 bases:

>100_bases
AGATCAAGGTCGTGGCGGACAAGTAACCCATTTTTTTCCGTGATCAAGCGCACGTTTCGGGCTGCGATGCGGTCCCGGGA
CGTGCGAAATAGGAGTTGTA

Downstream 100 bases:

>100_bases
ATGACGTGGCGATCAATAGCCATGTAGTGAGTTCAGGCTAGGGTACGCCTTGCTGATCTTTATGGGCCACCACAAGCACA
GTTTGACGTGATGCCTGATC

Product: cupin region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MNGFVQDIQKLALENDDFRQVLYTAKNSQLVLMSLKPQEDIGAEIHKVDQFFRVEEGTGEAVLNGARTPIQAGFAVLVPA
GVNHNIINTGTVPLKLYTLYAPPNHRDGVIHKSRSDAEGDAEHFNGKTTEQRSIK

Sequences:

>Translated_135_residues
MNGFVQDIQKLALENDDFRQVLYTAKNSQLVLMSLKPQEDIGAEIHKVDQFFRVEEGTGEAVLNGARTPIQAGFAVLVPA
GVNHNIINTGTVPLKLYTLYAPPNHRDGVIHKSRSDAEGDAEHFNGKTTEQRSIK
>Mature_135_residues
MNGFVQDIQKLALENDDFRQVLYTAKNSQLVLMSLKPQEDIGAEIHKVDQFFRVEEGTGEAVLNGARTPIQAGFAVLVPA
GVNHNIINTGTVPLKLYTLYAPPNHRDGVIHKSRSDAEGDAEHFNGKTTEQRSIK

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 14913; Mature: 14913

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGFVQDIQKLALENDDFRQVLYTAKNSQLVLMSLKPQEDIGAEIHKVDQFFRVEEGTGE
CCHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCC
AVLNGARTPIQAGFAVLVPAGVNHNIINTGTVPLKLYTLYAPPNHRDGVIHKSRSDAEGD
EEECCCCCCCCCCEEEEEECCCCCCEEECCCCEEEEEEEECCCCCCCCCEECCCCCCCCC
AEHFNGKTTEQRSIK
HHHCCCCCCCCCCCC
>Mature Secondary Structure
MNGFVQDIQKLALENDDFRQVLYTAKNSQLVLMSLKPQEDIGAEIHKVDQFFRVEEGTGE
CCHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCC
AVLNGARTPIQAGFAVLVPAGVNHNIINTGTVPLKLYTLYAPPNHRDGVIHKSRSDAEGD
EEECCCCCCCCCCEEEEEECCCCCCEEECCCCEEEEEEEECCCCCCCCCEECCCCCCCCC
AEHFNGKTTEQRSIK
HHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]