Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71907546

Identifier: 71907546

GI number: 71907546

Start: 2059158

End: 2059820

Strand: Reverse

Name: 71907546

Synonym: Daro_1917

Alternate gene names: NA

Gene position: 2059820-2059158 (Counterclockwise)

Preceding gene: 71907547

Following gene: 71907545

Centisome position: 45.76

GC content: 46.91

Gene sequence:

>663_bases
ATGAACATTCCTAATTACATTGGAAAGAGCCCAAACGAGATTCTGGCAACGGAGTTCTTCGACTCTGCTAGCTATTTATA
TCGGGGCATGGCTTGGCTCGATTATCACAAAAGAACAAAACAATTTTCCGCACTCATCTATGCCTGTGCTGAAGGTCGGC
ATGGGATCGAGTATTTGTTATTTGAAGAGCTAGTAATTAGCACTGGGGCCAATTTATCGGTCGAGGACTATCAGAAGTGC
GTTAATGAAAGAAACCGATTCAAAAAAACCATCGCACAACTCAGCCCCGACTATGAACGACTACAGGAGTTCACACAGAT
ACTTGCATCTTTGGAAGCATCATTTCCAAAGCTGATTTACTGGGATCATTCTGCGCTCATGAAGGCGTGGGGCTCCCTAT
CGCATTATCTCCATTGGTTTGGCGCCCGGAACCTCACGTCAGAGAGCGCCACTTGGGTAGCGTCTGCACAGGCTGAAATA
TCGAAGGTGCTTGAACCGATCTGGCTAAAGATCACGTCAGGACAAAGCGGGTTAATGCATCCGAAAGACATGAACCCTGT
TGTGCGAGACATATGGGAGCGCTTTCGGTTAGGGGAAATTGATGCTCCAACCGCAAAGTTTCAACTCGACTACCTTAAGC
CCCTAGCGCTCCAAAATGCATAA

Upstream 100 bases:

>100_bases
GGATGTCCAGTAATGGAAACATGTGTCCATATTTGGCTATAGATATCCAAATATGGATTTTTTCAGTGACGTCTACTTCA
CGTTATGCAACTGGCTCTAA

Downstream 100 bases:

>100_bases
CATTTCGGTCAAGCGGGACCGTCTTCCGGCGTGCCGCCTCCAGACGGCACCTTACCTTCAACTCTAGCCCACACCAATTT
TTCAGCGGAGGAAATTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MNIPNYIGKSPNEILATEFFDSASYLYRGMAWLDYHKRTKQFSALIYACAEGRHGIEYLLFEELVISTGANLSVEDYQKC
VNERNRFKKTIAQLSPDYERLQEFTQILASLEASFPKLIYWDHSALMKAWGSLSHYLHWFGARNLTSESATWVASAQAEI
SKVLEPIWLKITSGQSGLMHPKDMNPVVRDIWERFRLGEIDAPTAKFQLDYLKPLALQNA

Sequences:

>Translated_220_residues
MNIPNYIGKSPNEILATEFFDSASYLYRGMAWLDYHKRTKQFSALIYACAEGRHGIEYLLFEELVISTGANLSVEDYQKC
VNERNRFKKTIAQLSPDYERLQEFTQILASLEASFPKLIYWDHSALMKAWGSLSHYLHWFGARNLTSESATWVASAQAEI
SKVLEPIWLKITSGQSGLMHPKDMNPVVRDIWERFRLGEIDAPTAKFQLDYLKPLALQNA
>Mature_220_residues
MNIPNYIGKSPNEILATEFFDSASYLYRGMAWLDYHKRTKQFSALIYACAEGRHGIEYLLFEELVISTGANLSVEDYQKC
VNERNRFKKTIAQLSPDYERLQEFTQILASLEASFPKLIYWDHSALMKAWGSLSHYLHWFGARNLTSESATWVASAQAEI
SKVLEPIWLKITSGQSGLMHPKDMNPVVRDIWERFRLGEIDAPTAKFQLDYLKPLALQNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25305; Mature: 25305

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIPNYIGKSPNEILATEFFDSASYLYRGMAWLDYHKRTKQFSALIYACAEGRHGIEYLL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
FEELVISTGANLSVEDYQKCVNERNRFKKTIAQLSPDYERLQEFTQILASLEASFPKLIY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEE
WDHSALMKAWGSLSHYLHWFGARNLTSESATWVASAQAEISKVLEPIWLKITSGQSGLMH
ECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
PKDMNPVVRDIWERFRLGEIDAPTAKFQLDYLKPLALQNA
CCCCCHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHHCCC
>Mature Secondary Structure
MNIPNYIGKSPNEILATEFFDSASYLYRGMAWLDYHKRTKQFSALIYACAEGRHGIEYLL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
FEELVISTGANLSVEDYQKCVNERNRFKKTIAQLSPDYERLQEFTQILASLEASFPKLIY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEE
WDHSALMKAWGSLSHYLHWFGARNLTSESATWVASAQAEISKVLEPIWLKITSGQSGLMH
ECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
PKDMNPVVRDIWERFRLGEIDAPTAKFQLDYLKPLALQNA
CCCCCHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA