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The map label for this gene is czcC [H]

Identifier: 71907506

GI number: 71907506

Start: 2019051

End: 2020292

Strand: Reverse

Name: czcC [H]

Synonym: Daro_1877

Alternate gene names: 71907506

Gene position: 2020292-2019051 (Counterclockwise)

Preceding gene: 71907509

Following gene: 71907505

Centisome position: 44.88

GC content: 64.01

Gene sequence:

>1242_bases
ATGCGACGCCTACTGATTCCGATCTTGCTTGCCCCGTTGCTGGCCATCGCACAAGGGCAAACTGCATTAACCCTGAGCCA
GGCAGAGGCACTCTGGCAGGAACATAGCCGCGAACTCCAGCTGGCCAAGGCCGCCGTAAGCGGCGCCGAGGCCGACGTCA
AGGCGGCCCGGCAGATGCCGAACCCCGATGTCTCACTGAACGCCCTGTCGATCAGCCCGCAATCCGGGTTTGGTGGTGGC
CCGCTGAAAGACAAGCGGATGGACACCCAGTTGCGCATCGATCAGCTGATCGAGCGCGGTGGCAAACGGACCTTACGCGC
CAAGGGGGCAGAAGCCCGCCTCGAAGCCAGCCGTTTCGACCTGGACGATGCCACGCGTCAACAACTGGGCGATCTGCGCC
AGACCTATTACCAGCTCCGTCTGGCCCAGGAAAAACAGGCCCTGGCCCGCGATACCGCCGCGTTGTATGGCAAGAGCACC
GAGGCTGGTCGACTGCGCCAGAAAGCTGGCGATATCGCCCCGGTCGACGTGTCGCGACTGCAGATCGACCAGGCTCGCGC
CGATGCCGACGCCCGCCAGGCCCAGGCTGATCTGGCCCAGGCCCAGCAGATGCTCGCCTATCTGATTGGCCGCGAAGCTG
AAGCAGCGCAATTGGTGGCCGCTGACAACTGGCCGGCGCTTGAAGAAAAAGCACTCAGCGCCGCTCCGCTTGACGAGCGC
CCCGATCTGGCTGCCGCCCAGAAGCGCATTGCCGCGGCCGAAGCCGACCGCGATCTGGCCCGTGCCAAGAAGAGCCGCGA
CGTGACGGTCGGCTTCCAGTTCGAACGCAATCTGCAGAATGCCCCGACCAACAGCTACGGGGTCGGCATCAGCGTACCGC
TGTTCATCTGGCACGAATATGAGGGTGAAATCGCCCGCGCCGAATCTGATCTCAATATTGCCCGTCTGCAATACGAGCAG
CAGCATGCCCAGGCCTTTGGCCAGGTTGCCCAGGCGCGCAACGCCCTGCTTGCCGTGCGAGACCGGGTGCAACGGCTCGA
GGGCGGCCTGCTGGGTGATGCCGAGCGCGTCGCCAAAGCGGCGGAACTGGCTTATAACAAGGGGGCGATGGGTCTGATGG
ACCTGCTCGACGCCCGCCGCACGCTGCGCCAGATTCAGATTGAAGCAGCCAGCGCCCGTGCTGACTACGCCAAAGCATTG
TCGGACTGGCAGACCCAGGCCGAATTCAGGAAATCCCCATGA

Upstream 100 bases:

>100_bases
GCCAGCAGGGCGTCATCTTCGACGAGCAGGATGTGCATGTATGTCAGTAATTGGTCAGGGTCGCTTACTACGATAACACT
CCCTAAAGAATCCTTCACTG

Downstream 100 bases:

>100_bases
AGCTGACCTCCCCTCTCCTTATCCTGTTGCTGGCCCTGGCCGGCTGCTCGGCCGAACCGGAAGCGCAGAAAGCCGCCGCG
ATCAAGGTGGATGGCGACCG

Product: Outer membrane efflux protein

Products: NA

Alternate protein names: Cation efflux system protein CzcC [H]

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MRRLLIPILLAPLLAIAQGQTALTLSQAEALWQEHSRELQLAKAAVSGAEADVKAARQMPNPDVSLNALSISPQSGFGGG
PLKDKRMDTQLRIDQLIERGGKRTLRAKGAEARLEASRFDLDDATRQQLGDLRQTYYQLRLAQEKQALARDTAALYGKST
EAGRLRQKAGDIAPVDVSRLQIDQARADADARQAQADLAQAQQMLAYLIGREAEAAQLVAADNWPALEEKALSAAPLDER
PDLAAAQKRIAAAEADRDLARAKKSRDVTVGFQFERNLQNAPTNSYGVGISVPLFIWHEYEGEIARAESDLNIARLQYEQ
QHAQAFGQVAQARNALLAVRDRVQRLEGGLLGDAERVAKAAELAYNKGAMGLMDLLDARRTLRQIQIEAASARADYAKAL
SDWQTQAEFRKSP

Sequences:

>Translated_413_residues
MRRLLIPILLAPLLAIAQGQTALTLSQAEALWQEHSRELQLAKAAVSGAEADVKAARQMPNPDVSLNALSISPQSGFGGG
PLKDKRMDTQLRIDQLIERGGKRTLRAKGAEARLEASRFDLDDATRQQLGDLRQTYYQLRLAQEKQALARDTAALYGKST
EAGRLRQKAGDIAPVDVSRLQIDQARADADARQAQADLAQAQQMLAYLIGREAEAAQLVAADNWPALEEKALSAAPLDER
PDLAAAQKRIAAAEADRDLARAKKSRDVTVGFQFERNLQNAPTNSYGVGISVPLFIWHEYEGEIARAESDLNIARLQYEQ
QHAQAFGQVAQARNALLAVRDRVQRLEGGLLGDAERVAKAAELAYNKGAMGLMDLLDARRTLRQIQIEAASARADYAKAL
SDWQTQAEFRKSP
>Mature_413_residues
MRRLLIPILLAPLLAIAQGQTALTLSQAEALWQEHSRELQLAKAAVSGAEADVKAARQMPNPDVSLNALSISPQSGFGGG
PLKDKRMDTQLRIDQLIERGGKRTLRAKGAEARLEASRFDLDDATRQQLGDLRQTYYQLRLAQEKQALARDTAALYGKST
EAGRLRQKAGDIAPVDVSRLQIDQARADADARQAQADLAQAQQMLAYLIGREAEAAQLVAADNWPALEEKALSAAPLDER
PDLAAAQKRIAAAEADRDLARAKKSRDVTVGFQFERNLQNAPTNSYGVGISVPLFIWHEYEGEIARAESDLNIARLQYEQ
QHAQAFGQVAQARNALLAVRDRVQRLEGGLLGDAERVAKAAELAYNKGAMGLMDLLDARRTLRQIQIEAASARADYAKAL
SDWQTQAEFRKSP

Specific function: CzcC protein appears to modify the specificity of the system, perhaps by acting on the CzcB protein. When the CzcC protein is added to CzcA and CzcB, the efflux system gains specificity for cadmium and cobalt [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 45248; Mature: 45248

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLLIPILLAPLLAIAQGQTALTLSQAEALWQEHSRELQLAKAAVSGAEADVKAARQMP
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
NPDVSLNALSISPQSGFGGGPLKDKRMDTQLRIDQLIERGGKRTLRAKGAEARLEASRFD
CCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHCC
LDDATRQQLGDLRQTYYQLRLAQEKQALARDTAALYGKSTEAGRLRQKAGDIAPVDVSRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHH
QIDQARADADARQAQADLAQAQQMLAYLIGREAEAAQLVAADNWPALEEKALSAAPLDER
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCHHHHHHHCCCCCCCC
PDLAAAQKRIAAAEADRDLARAKKSRDVTVGFQFERNLQNAPTNSYGVGISVPLFIWHEY
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECC
EGEIARAESDLNIARLQYEQQHAQAFGQVAQARNALLAVRDRVQRLEGGLLGDAERVAKA
CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AELAYNKGAMGLMDLLDARRTLRQIQIEAASARADYAKALSDWQTQAEFRKSP
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRRLLIPILLAPLLAIAQGQTALTLSQAEALWQEHSRELQLAKAAVSGAEADVKAARQMP
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
NPDVSLNALSISPQSGFGGGPLKDKRMDTQLRIDQLIERGGKRTLRAKGAEARLEASRFD
CCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHCC
LDDATRQQLGDLRQTYYQLRLAQEKQALARDTAALYGKSTEAGRLRQKAGDIAPVDVSRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHH
QIDQARADADARQAQADLAQAQQMLAYLIGREAEAAQLVAADNWPALEEKALSAAPLDER
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCHHHHHHHCCCCCCCC
PDLAAAQKRIAAAEADRDLARAKKSRDVTVGFQFERNLQNAPTNSYGVGISVPLFIWHEY
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECC
EGEIARAESDLNIARLQYEQQHAQAFGQVAQARNALLAVRDRVQRLEGGLLGDAERVAKA
CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AELAYNKGAMGLMDLLDARRTLRQIQIEAASARADYAKALSDWQTQAEFRKSP
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2678100; 7766206 [H]