| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is ptxB [H]
Identifier: 71907455
GI number: 71907455
Start: 1963947
End: 1964828
Strand: Reverse
Name: ptxB [H]
Synonym: Daro_1826
Alternate gene names: 71907455
Gene position: 1964828-1963947 (Counterclockwise)
Preceding gene: 71907458
Following gene: 71907454
Centisome position: 43.65
GC content: 62.13
Gene sequence:
>882_bases ATGAGCTTTTCTTCCCTGCGCCGCGCGGCGCTCAAGGGCGCGGTTGCCTGCGCTTTCGCTGCATCCGTTTCTGCCGCCCT GCCGGCCCTCGCTTCCGACGCAGTCCTGCGCGTCTCGGCCATTCCGGACGAAGCCCCCACCGAACTGCAACGCAAGTTCG CCCCGCTTGGCAAATACCTCGAAGCGCAGACCGGCATGAAGGTCATCTTCACGCCGGTATCCGACTACGCTGCTGTGGTC GAATCGCTGGCCACGAAGAAGATCGACCTCGCCTGGCTCGGCGGCTTCACCTTCGTGCAAGCCAAGATCCGCACCAACGG CACGGCCATCCCCATCGCCCAGCGCGAGGAGGATGCCAAGTTCACGTCCAAGTTCATCACCGCCGACCCGAGCATCAAGT CGCTGGCCGACCTCAAGGGCAAGACCTTCGCTTTCGGCGCCCCGTCATCGACCTCGGGCAGCCTGATGCCTCGCTTCTTC CTGCAGCAAGCCGGCCTGAATCCGGAAAAGGACTTCAAGAACGTCGCCTTCTCCGGCGCCCATGACGCCACCGTTGCCTT CGTCGCGGCAGGCAAGGCTGAAGCCGGCGTATTGAACACCTCGGTCTGGGACAAGATGGTCGAGGCCAAGAAGGTCGATA CCGACAAGGTCCGCGTCTTCGCCACCACCCCACCCTACTTCGACTACAACTGGACGGTCCGCGGCGACCTCGATCCGGTC ATCATCAAGAAACTGACCGACGCCTTCCTGAAGCTCGACCCGGCCAACCCGGAACACAAGGAAATCCTCGCCCTGCAACG TGCTGCCAAGTTCATTCCGACCAAGAAGGAAAACTACGACGGTATCGAAAAGGCCGCCCATTCGGCCGGCTTGCTGAAGT AA
Upstream 100 bases:
>100_bases CTGCGGTCTATGTACCGCATCGAATGGTTGGCGCCTCGGCGCCTTGTAAGCTGCCGTGACATCCGCACGGCGGCGGTTGC TGGAAAAATCGGAGTACAAC
Downstream 100 bases:
>100_bases ATCGGGCATGAGTTTCAGGCTGAACGGCGTGGGCTTGACCCACGCCAACGGTTTTGCCGCGCTGAAAGGCATCACGCTGC TGGCGGAGAAAGGCGAGCGC
Product: phosphonate-binding periplasmic protein
Products: 3-phospho-serine [Cytoplasm]; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSFSSLRRAALKGAVACAFAASVSAALPALASDAVLRVSAIPDEAPTELQRKFAPLGKYLEAQTGMKVIFTPVSDYAAVV ESLATKKIDLAWLGGFTFVQAKIRTNGTAIPIAQREEDAKFTSKFITADPSIKSLADLKGKTFAFGAPSSTSGSLMPRFF LQQAGLNPEKDFKNVAFSGAHDATVAFVAAGKAEAGVLNTSVWDKMVEAKKVDTDKVRVFATTPPYFDYNWTVRGDLDPV IIKKLTDAFLKLDPANPEHKEILALQRAAKFIPTKKENYDGIEKAAHSAGLLK
Sequences:
>Translated_293_residues MSFSSLRRAALKGAVACAFAASVSAALPALASDAVLRVSAIPDEAPTELQRKFAPLGKYLEAQTGMKVIFTPVSDYAAVV ESLATKKIDLAWLGGFTFVQAKIRTNGTAIPIAQREEDAKFTSKFITADPSIKSLADLKGKTFAFGAPSSTSGSLMPRFF LQQAGLNPEKDFKNVAFSGAHDATVAFVAAGKAEAGVLNTSVWDKMVEAKKVDTDKVRVFATTPPYFDYNWTVRGDLDPV IIKKLTDAFLKLDPANPEHKEILALQRAAKFIPTKKENYDGIEKAAHSAGLLK >Mature_292_residues SFSSLRRAALKGAVACAFAASVSAALPALASDAVLRVSAIPDEAPTELQRKFAPLGKYLEAQTGMKVIFTPVSDYAAVVE SLATKKIDLAWLGGFTFVQAKIRTNGTAIPIAQREEDAKFTSKFITADPSIKSLADLKGKTFAFGAPSSTSGSLMPRFFL QQAGLNPEKDFKNVAFSGAHDATVAFVAAGKAEAGVLNTSVWDKMVEAKKVDTDKVRVFATTPPYFDYNWTVRGDLDPVI IKKLTDAFLKLDPANPEHKEILALQRAAKFIPTKKENYDGIEKAAHSAGLLK
Specific function: Probably forms part of a binding-protein-dependent phosphite transporter. Required for oxidation of phosphite to phosphate [H]
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790543, Length=238, Percent_Identity=27.3109243697479, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR005770 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 31490; Mature: 31359
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSSLRRAALKGAVACAFAASVSAALPALASDAVLRVSAIPDEAPTELQRKFAPLGKYL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHH EAQTGMKVIFTPVSDYAAVVESLATKKIDLAWLGGFTFVQAKIRTNGTAIPIAQREEDAK HHCCCCEEEEECHHHHHHHHHHHHHCCEEEEEECCEEEEEEEEECCCCEEECCCCCHHHH FTSKFITADPSIKSLADLKGKTFAFGAPSSTSGSLMPRFFLQQAGLNPEKDFKNVAFSGA HHHHHEECCCCHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCC HDATVAFVAAGKAEAGVLNTSVWDKMVEAKKVDTDKVRVFATTPPYFDYNWTVRGDLDPV CCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCHH IIKKLTDAFLKLDPANPEHKEILALQRAAKFIPTKKENYDGIEKAAHSAGLLK HHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure SFSSLRRAALKGAVACAFAASVSAALPALASDAVLRVSAIPDEAPTELQRKFAPLGKYL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHH EAQTGMKVIFTPVSDYAAVVESLATKKIDLAWLGGFTFVQAKIRTNGTAIPIAQREEDAK HHCCCCEEEEECHHHHHHHHHHHHHCCEEEEEECCEEEEEEEEECCCCEEECCCCCHHHH FTSKFITADPSIKSLADLKGKTFAFGAPSSTSGSLMPRFFLQQAGLNPEKDFKNVAFSGA HHHHHEECCCCHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCC HDATVAFVAAGKAEAGVLNTSVWDKMVEAKKVDTDKVRVFATTPPYFDYNWTVRGDLDPV CCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCHH IIKKLTDAFLKLDPANPEHKEILALQRAAKFIPTKKENYDGIEKAAHSAGLLK HHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9791102 [H]