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The map label for this gene is phnC

Identifier: 71907454

GI number: 71907454

Start: 1963112

End: 1963939

Strand: Reverse

Name: phnC

Synonym: Daro_1825

Alternate gene names: 71907454

Gene position: 1963939-1963112 (Counterclockwise)

Preceding gene: 71907455

Following gene: 71907453

Centisome position: 43.63

GC content: 64.49

Gene sequence:

>828_bases
ATGAGTTTCAGGCTGAACGGCGTGGGCTTGACCCACGCCAACGGTTTTGCCGCGCTGAAAGGCATCACGCTGCTGGCGGA
GAAAGGCGAGCGCATCGCCCTGATCGGCCCGTCCGGCGCTGGCAAGACCTCACTACTATCGGTGCTCGGTACAGCGCTGG
AGCCGACTAATGGCCTGGCGGAAGTTTTCGATTGTGATCAGAATTTCTGGGGCCCCTCAGCAATCAAGGCATTACGCGCC
CGTATCGGCACCGTCCACCAATCACCACCGATTCCCGGCCGGCAACGCGTCGTGACGGCCGTTCTGGCTGGCAAGCTTGG
CCAGTGGCCAGCCTGGAAATCCTTGGCCTCGCTGGTTTATCCGCTCGATATCCCCGGCGCCCGTGCCGCGCTCGAACGTG
TCGATCTGGCCGACAAACTCTTCGCCCGCTGCGACGAACTCTCCGGCGGACAGTTGCAGCGTGTCGGCATCGCCCGCGTG
CTTTACCAGCAGCCGGAACTGATCCTTGCCGACGAACCGGTTTCCGCCCTCGACCCGGCGCTGGCGCTGGCCACCATCCG
CCTGCTGACGGCCGATGCCGAGGCCCGTGGCGCGACGCTGGTCGCCAGTCTGCACGCCGTCGACCTGGCGCTCGGCAACT
TCCCGCGCATCGTCGGCGTCAAGGCCGGCCGTATCGCCTTTGATCTGCCCAGCGAGCGAGTTACCGTGCCAATGCTGCAT
GAGCTGTACGCCAGCGAAGGCGAGCAACTGCCCATCCAGGCGCACGAACCGCATTTCCTGTCGCAAGTACCTGCCAATGA
TGCAGCGACGCGGGCGAAATGCTGCTGA

Upstream 100 bases:

>100_bases
GCCCTGCAACGTGCTGCCAAGTTCATTCCGACCAAGAAGGAAAACTACGACGGTATCGAAAAGGCCGCCCATTCGGCCGG
CTTGCTGAAGTAAATCGGGC

Downstream 100 bases:

>100_bases
ATCCAGCCGACCGCGACCCTGCTGCTCGTGGCCGCCTGATCGGCGCACTGGCAACGCTCGTCATCCTCTGTCCATTATTC
CAGGCCGCCGAGGTCAAGCC

Product: ABC transporter related

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MSFRLNGVGLTHANGFAALKGITLLAEKGERIALIGPSGAGKTSLLSVLGTALEPTNGLAEVFDCDQNFWGPSAIKALRA
RIGTVHQSPPIPGRQRVVTAVLAGKLGQWPAWKSLASLVYPLDIPGARAALERVDLADKLFARCDELSGGQLQRVGIARV
LYQQPELILADEPVSALDPALALATIRLLTADAEARGATLVASLHAVDLALGNFPRIVGVKAGRIAFDLPSERVTVPMLH
ELYASEGEQLPIQAHEPHFLSQVPANDAATRAKCC

Sequences:

>Translated_275_residues
MSFRLNGVGLTHANGFAALKGITLLAEKGERIALIGPSGAGKTSLLSVLGTALEPTNGLAEVFDCDQNFWGPSAIKALRA
RIGTVHQSPPIPGRQRVVTAVLAGKLGQWPAWKSLASLVYPLDIPGARAALERVDLADKLFARCDELSGGQLQRVGIARV
LYQQPELILADEPVSALDPALALATIRLLTADAEARGATLVASLHAVDLALGNFPRIVGVKAGRIAFDLPSERVTVPMLH
ELYASEGEQLPIQAHEPHFLSQVPANDAATRAKCC
>Mature_274_residues
SFRLNGVGLTHANGFAALKGITLLAEKGERIALIGPSGAGKTSLLSVLGTALEPTNGLAEVFDCDQNFWGPSAIKALRAR
IGTVHQSPPIPGRQRVVTAVLAGKLGQWPAWKSLASLVYPLDIPGARAALERVDLADKLFARCDELSGGQLQRVGIARVL
YQQPELILADEPVSALDPALALATIRLLTADAEARGATLVASLHAVDLALGNFPRIVGVKAGRIAFDLPSERVTVPMLHE
LYASEGEQLPIQAHEPHFLSQVPANDAATRAKCC

Specific function: Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system

COG id: COG3638

COG function: function code P; ABC-type phosphate/phosphonate transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain

Homologues:

Organism=Homo sapiens, GI4505771, Length=172, Percent_Identity=30.2325581395349, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI9961252, Length=172, Percent_Identity=30.2325581395349, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI9961250, Length=196, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1790544, Length=237, Percent_Identity=36.2869198312236, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1788225, Length=220, Percent_Identity=35.4545454545455, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787089, Length=238, Percent_Identity=34.0336134453782, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787029, Length=211, Percent_Identity=35.0710900473934, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1786253, Length=208, Percent_Identity=34.1346153846154, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1786803, Length=242, Percent_Identity=29.7520661157025, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1789672, Length=212, Percent_Identity=31.1320754716981, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789873, Length=215, Percent_Identity=31.1627906976744, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787105, Length=220, Percent_Identity=31.8181818181818, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786319, Length=213, Percent_Identity=29.5774647887324, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790739, Length=252, Percent_Identity=27.3809523809524, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI87081834, Length=217, Percent_Identity=31.7972350230415, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1790162, Length=172, Percent_Identity=36.6279069767442, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786345, Length=244, Percent_Identity=29.5081967213115, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786703, Length=200, Percent_Identity=30.5, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787500, Length=198, Percent_Identity=29.7979797979798, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787370, Length=216, Percent_Identity=31.0185185185185, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789032, Length=217, Percent_Identity=27.6497695852535, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1786398, Length=194, Percent_Identity=30.4123711340206, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1789962, Length=193, Percent_Identity=31.0880829015544, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789891, Length=233, Percent_Identity=31.3304721030043, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787712, Length=217, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1789864, Length=223, Percent_Identity=27.8026905829596, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786872, Length=197, Percent_Identity=28.9340101522843, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1790467, Length=217, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787112, Length=208, Percent_Identity=32.2115384615385, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788450, Length=204, Percent_Identity=30.3921568627451, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1788761, Length=207, Percent_Identity=29.951690821256, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1787759, Length=209, Percent_Identity=30.1435406698565, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786563, Length=175, Percent_Identity=30.2857142857143, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788506, Length=198, Percent_Identity=31.3131313131313, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87081791, Length=245, Percent_Identity=26.9387755102041, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1788002, Length=243, Percent_Identity=29.6296296296296, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1787164, Length=225, Percent_Identity=28.8888888888889, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71984940, Length=196, Percent_Identity=31.1224489795918, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI85724864, Length=197, Percent_Identity=29.9492385786802, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580555, Length=197, Percent_Identity=29.9492385786802, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI85816269, Length=197, Percent_Identity=29.9492385786802, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580553, Length=197, Percent_Identity=29.9492385786802, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281363262, Length=169, Percent_Identity=28.9940828402367, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24653245, Length=164, Percent_Identity=29.2682926829268, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PHNC_DECAR (Q47F10)

Other databases:

- EMBL:   CP000089
- RefSeq:   YP_285041.1
- ProteinModelPortal:   Q47F10
- SMR:   Q47F10
- STRING:   Q47F10
- GeneID:   3566079
- GenomeReviews:   CP000089_GR
- KEGG:   dar:Daro_1825
- NMPDR:   fig|159087.4.peg.1836
- eggNOG:   COG3638
- HOGENOM:   HBG758042
- OMA:   IGIREGQ
- BioCyc:   DARO159087:DARO_1825-MONOMER
- HAMAP:   MF_01713
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR012693
- InterPro:   IPR003593
- SMART:   SM00382

Pfam domain/function: PF00005 ABC_tran

EC number: =3.6.3.28

Molecular weight: Translated: 29065; Mature: 28934

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS00211 ABC_TRANSPORTER_1; PS50893 ABC_TRANSPORTER_2; PS51249 PHNC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRLNGVGLTHANGFAALKGITLLAEKGERIALIGPSGAGKTSLLSVLGTALEPTNGLA
CCEEECCEEEECCCCHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHH
EVFDCDQNFWGPSAIKALRARIGTVHQSPPIPGRQRVVTAVLAGKLGQWPAWKSLASLVY
HHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCC
PLDIPGARAALERVDLADKLFARCDELSGGQLQRVGIARVLYQQPELILADEPVSALDPA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHH
LALATIRLLTADAEARGATLVASLHAVDLALGNFPRIVGVKAGRIAFDLPSERVTVPMLH
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCEEHHHHH
ELYASEGEQLPIQAHEPHFLSQVPANDAATRAKCC
HHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHCCCC
>Mature Secondary Structure 
SFRLNGVGLTHANGFAALKGITLLAEKGERIALIGPSGAGKTSLLSVLGTALEPTNGLA
CEEECCEEEECCCCHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHH
EVFDCDQNFWGPSAIKALRARIGTVHQSPPIPGRQRVVTAVLAGKLGQWPAWKSLASLVY
HHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCC
PLDIPGARAALERVDLADKLFARCDELSGGQLQRVGIARVLYQQPELILADEPVSALDPA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHH
LALATIRLLTADAEARGATLVASLHAVDLALGNFPRIVGVKAGRIAFDLPSERVTVPMLH
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCEEHHHHH
ELYASEGEQLPIQAHEPHFLSQVPANDAATRAKCC
HHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA