| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907431
Identifier: 71907431
GI number: 71907431
Start: 1938048
End: 1938605
Strand: Reverse
Name: 71907431
Synonym: Daro_1801
Alternate gene names: NA
Gene position: 1938605-1938048 (Counterclockwise)
Preceding gene: 71907437
Following gene: 71907430
Centisome position: 43.07
GC content: 58.42
Gene sequence:
>558_bases ATGTTCAGCAAACCCACCATCACCAATCGCAATGACACCATCACCCGCAAGGAGGTCAATAGCATCCTGGGCTCCAACGC TGCTAACCTGAAACCAGTCGCCGAACCAGTGGCAGTGGCGCCAACGCCGGCGCCCCCTGAAAAACCGGAGGCCACCAACA CCTCCGAAAACGTGATGGGCGCCCGCTTGATCGTCGGTCCTGACGTCAAACTCAAGGGGGCCGAAATTCTTGATTGCGAC ACGCTGGTCGTCGAAGGTCGCGTCGAAGCCACCATGGATAGCCGGGTTATTCGCATCGCCGACAAAGGCGCTTTTTCCGG CAAGGTCAGCATCGACATTGCCGAAATTCACGGCAGCTTTGACGGCGAACTGACCGCACGCTCCCAGTTGATCATTCACG CCACCGGCCGGGTCAGCGGCAAGATTCGTTACGGCAAGCTGGTGATCGATGAAGGCGGAGAATTGTGCGGCGACATCAAC GCAATATCCGCCGAAAAATCGGGCCAGTTCCACCATCGTGAGGAACCGGCAATCTCCCTCAGCGCCGTCGCTGGTTGA
Upstream 100 bases:
>100_bases AACCAATACATTGTTTTTAATTGTTTTTTTATACATGGCACGCTTATCGCAATGGACTCCCAGACAGTTAATCGTCGCAA ACCTCAAAACGGGAGTTTCC
Downstream 100 bases:
>100_bases TTACATTTTAGGCAGACCATAGAATGCAATCCATGCATCATGTAGCACCACCTAAATCCACACCCCCGAAAGGCCACTTC GGCGCCCATTTGTTGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MFSKPTITNRNDTITRKEVNSILGSNAANLKPVAEPVAVAPTPAPPEKPEATNTSENVMGARLIVGPDVKLKGAEILDCD TLVVEGRVEATMDSRVIRIADKGAFSGKVSIDIAEIHGSFDGELTARSQLIIHATGRVSGKIRYGKLVIDEGGELCGDIN AISAEKSGQFHHREEPAISLSAVAG
Sequences:
>Translated_185_residues MFSKPTITNRNDTITRKEVNSILGSNAANLKPVAEPVAVAPTPAPPEKPEATNTSENVMGARLIVGPDVKLKGAEILDCD TLVVEGRVEATMDSRVIRIADKGAFSGKVSIDIAEIHGSFDGELTARSQLIIHATGRVSGKIRYGKLVIDEGGELCGDIN AISAEKSGQFHHREEPAISLSAVAG >Mature_185_residues MFSKPTITNRNDTITRKEVNSILGSNAANLKPVAEPVAVAPTPAPPEKPEATNTSENVMGARLIVGPDVKLKGAEILDCD TLVVEGRVEATMDSRVIRIADKGAFSGKVSIDIAEIHGSFDGELTARSQLIIHATGRVSGKIRYGKLVIDEGGELCGDIN AISAEKSGQFHHREEPAISLSAVAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19496; Mature: 19496
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSKPTITNRNDTITRKEVNSILGSNAANLKPVAEPVAVAPTPAPPEKPEATNTSENVMG CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCE ARLIVGPDVKLKGAEILDCDTLVVEGRVEATMDSRVIRIADKGAFSGKVSIDIAEIHGSF EEEEECCCCEECCCEEECCCEEEECCEEEECCCCEEEEEECCCCCCCEEEEEEEEECCCC DGELTARSQLIIHATGRVSGKIRYGKLVIDEGGELCGDINAISAEKSGQFHHREEPAISL CCCEEECEEEEEEECCCCCCEEEEEEEEEECCCCEECCCEEECCCCCCCCCCCCCCCEEE SAVAG EEECC >Mature Secondary Structure MFSKPTITNRNDTITRKEVNSILGSNAANLKPVAEPVAVAPTPAPPEKPEATNTSENVMG CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCE ARLIVGPDVKLKGAEILDCDTLVVEGRVEATMDSRVIRIADKGAFSGKVSIDIAEIHGSF EEEEECCCCEECCCEEECCCEEEECCEEEECCCCEEEEEECCCCCCCEEEEEEEEECCCC DGELTARSQLIIHATGRVSGKIRYGKLVIDEGGELCGDINAISAEKSGQFHHREEPAISL CCCEEECEEEEEEECCCCCCEEEEEEEEEECCCCEECCCEEECCCCCCCCCCCCCCCEEE SAVAG EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA