| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907430
Identifier: 71907430
GI number: 71907430
Start: 1937383
End: 1938024
Strand: Reverse
Name: 71907430
Synonym: Daro_1800
Alternate gene names: NA
Gene position: 1938024-1937383 (Counterclockwise)
Preceding gene: 71907431
Following gene: 71907429
Centisome position: 43.06
GC content: 60.44
Gene sequence:
>642_bases ATGCAATCCATGCATCATGTAGCACCACCTAAATCCACACCCCCGAAAGGCCACTTCGGCGCCCATTTGTTGCCGGACGT TAGTGACCTTGAAATAGGCACGGGCATTGATTCCGGTTCGCCGGAATTGATGATTGCCCCGGCCGTCACATATCAGCAAA ATCGGGCGTGCGGTGCGCTGGTTCGACGCATGTACTCCTGGCGCGGTTACCGCCTCTCTCCGCCCCGCCAGCAGCTTGGC GATCCCAACCACGTCACGCTCGGCGCCTGGCAAGACCGTGATCTGGTGGCAACGCTGACCGCTTCGCGTGATTCCAGCGA GGGTTTGCTGGCCGATACGCTTTACGGCCAGGAGATGGCCGGGCTACGCAAACCGGCCAGGGTGATCTGCGAAGTTACTC GCCTGGCGGTCGATCTCGATTGCCATGACCCGGAATTGCTGCACTCGCTCTTTCGAGCCGCCTACCAGTACGCCAGAGCG GTTTTTGGCGGCACCGATGTCGTCATCGAAGTCAATCCCCGGCACGCCGGCTATTACCGGCGGCAGCTTGGCTTTACACA AGTCGGATCGCTCCGTACCTGCCCGCGGGTAGAAGCACCAGCCATCCTGCTGCATCGTACGCTCGGCAACCTCCACTTTT AG
Upstream 100 bases:
>100_bases CAATATCCGCCGAAAAATCGGGCCAGTTCCACCATCGTGAGGAACCGGCAATCTCCCTCAGCGCCGTCGCTGGTTGATTA CATTTTAGGCAGACCATAGA
Downstream 100 bases:
>100_bases CTTCCTCCTCAACTCAAACCAACAATGACCAGCCCCCGACATTCGGGAGGCTGGTCATTTGCATTGAAGCCCCGTAGACT TCGCAGATCAAAAAATCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MQSMHHVAPPKSTPPKGHFGAHLLPDVSDLEIGTGIDSGSPELMIAPAVTYQQNRACGALVRRMYSWRGYRLSPPRQQLG DPNHVTLGAWQDRDLVATLTASRDSSEGLLADTLYGQEMAGLRKPARVICEVTRLAVDLDCHDPELLHSLFRAAYQYARA VFGGTDVVIEVNPRHAGYYRRQLGFTQVGSLRTCPRVEAPAILLHRTLGNLHF
Sequences:
>Translated_213_residues MQSMHHVAPPKSTPPKGHFGAHLLPDVSDLEIGTGIDSGSPELMIAPAVTYQQNRACGALVRRMYSWRGYRLSPPRQQLG DPNHVTLGAWQDRDLVATLTASRDSSEGLLADTLYGQEMAGLRKPARVICEVTRLAVDLDCHDPELLHSLFRAAYQYARA VFGGTDVVIEVNPRHAGYYRRQLGFTQVGSLRTCPRVEAPAILLHRTLGNLHF >Mature_213_residues MQSMHHVAPPKSTPPKGHFGAHLLPDVSDLEIGTGIDSGSPELMIAPAVTYQQNRACGALVRRMYSWRGYRLSPPRQQLG DPNHVTLGAWQDRDLVATLTASRDSSEGLLADTLYGQEMAGLRKPARVICEVTRLAVDLDCHDPELLHSLFRAAYQYARA VFGGTDVVIEVNPRHAGYYRRQLGFTQVGSLRTCPRVEAPAILLHRTLGNLHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23534; Mature: 23534
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSMHHVAPPKSTPPKGHFGAHLLPDVSDLEIGTGIDSGSPELMIAPAVTYQQNRACGAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCCHHHHH VRRMYSWRGYRLSPPRQQLGDPNHVTLGAWQDRDLVATLTASRDSSEGLLADTLYGQEMA HHHHHHCCCCCCCCCHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH GLRKPARVICEVTRLAVDLDCHDPELLHSLFRAAYQYARAVFGGTDVVIEVNPRHAGYYR HHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHH RQLGFTQVGSLRTCPRVEAPAILLHRTLGNLHF HHCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MQSMHHVAPPKSTPPKGHFGAHLLPDVSDLEIGTGIDSGSPELMIAPAVTYQQNRACGAL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCCHHHHH VRRMYSWRGYRLSPPRQQLGDPNHVTLGAWQDRDLVATLTASRDSSEGLLADTLYGQEMA HHHHHHCCCCCCCCCHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH GLRKPARVICEVTRLAVDLDCHDPELLHSLFRAAYQYARAVFGGTDVVIEVNPRHAGYYR HHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHH RQLGFTQVGSLRTCPRVEAPAILLHRTLGNLHF HHCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA