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The map label for this gene is frdC [H]

Identifier: 71907408

GI number: 71907408

Start: 1917458

End: 1918276

Strand: Reverse

Name: frdC [H]

Synonym: Daro_1778

Alternate gene names: 71907408

Gene position: 1918276-1917458 (Counterclockwise)

Preceding gene: 71907419

Following gene: 71907407

Centisome position: 42.62

GC content: 59.46

Gene sequence:

>819_bases
ATGAGCAGCCTGATCAAAAGCAATGCCAGCGGCGAACTGGGCCTTCAAGCAATGCCCCATCCCCAGACGCATGGCACGGC
ACAAACCAAACCACGCAAAAGCCGCTGGCCAGCCCGTCTTGATGTGCTGCAGAGCGCCACCGGCTGCATCCTCGCTGTCT
TCCTGATGGCGCACATGTTCTTTGTGTCCACCATTCTGATCAGCCAGCAGGCTTTTTACACCGTGGCCCGTTTCTTCGAA
GGGGCTTACTTCTTCGCCAGGCCCTACCCGGCGCTTGTCTCGTGCGTGGTTGCTGTTGTTATTGCCCTCTTTATTGGCCA
CGCCGGGCTGGCGATGCGTAAATTCCCGGCCGGGTTTCGCCAGTTCAATGCCTTCCGCCGGCACAAAAACCGGTTTCAAC
ACAGCGATACCTCGCTGTGGTGGATACAAGCATGGACCGGGTTTGCCCTGTTCTTCATGGCCACCATCCACCTCTACGAC
ATGTTGACCCAGCCGGCGCTGATTGGCCCCTTCGAATCGGCCGACCGGGTATGGAGCGGCAACATGTGGCCGCTCTATCT
GGCACTGTTGTTCGCGGTCGAACTGCATGGCGGCATCGGACTGTATAGGCTGGCGATCAAATGGGGCTGGCTGGAAGGCA
GCGATCCGCAGCGCAGCCGACGGCGCCTGGCTATCGTTCGCTATTCGTTCAGTGCTTTCTTTGTCACCCTCGGGCTTGTC
ACGCTGCTCACCTACATCGATCTCGGCCGGGTCCATGCCGACCATGCCGGAGAGCGCTACATCCCGCCCCAGAGCATTTC
TTCCGTGGACAGGCACTGA

Upstream 100 bases:

>100_bases
GACGGTCGGCATGTCGCATCGGGCTTCCGCCACGGTCGCGTCATTTCGGCTTCCGGCATCCGCCTTCGCCACTTGAAGGT
TATTGCAAGGAAACATAGCC

Downstream 100 bases:

>100_bases
CATGGAAACCATCCACACTGACGTGCTGGTCATCGGCGGCGGATTGGCCGGCCTGCGCGCCGCGCTGGCGGCCCGCAAGC
GTGGCAATAGCGTGCTGATT

Product: fumarate reductase cytochrome b-556 subunit

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSSLIKSNASGELGLQAMPHPQTHGTAQTKPRKSRWPARLDVLQSATGCILAVFLMAHMFFVSTILISQQAFYTVARFFE
GAYFFARPYPALVSCVVAVVIALFIGHAGLAMRKFPAGFRQFNAFRRHKNRFQHSDTSLWWIQAWTGFALFFMATIHLYD
MLTQPALIGPFESADRVWSGNMWPLYLALLFAVELHGGIGLYRLAIKWGWLEGSDPQRSRRRLAIVRYSFSAFFVTLGLV
TLLTYIDLGRVHADHAGERYIPPQSISSVDRH

Sequences:

>Translated_272_residues
MSSLIKSNASGELGLQAMPHPQTHGTAQTKPRKSRWPARLDVLQSATGCILAVFLMAHMFFVSTILISQQAFYTVARFFE
GAYFFARPYPALVSCVVAVVIALFIGHAGLAMRKFPAGFRQFNAFRRHKNRFQHSDTSLWWIQAWTGFALFFMATIHLYD
MLTQPALIGPFESADRVWSGNMWPLYLALLFAVELHGGIGLYRLAIKWGWLEGSDPQRSRRRLAIVRYSFSAFFVTLGLV
TLLTYIDLGRVHADHAGERYIPPQSISSVDRH
>Mature_271_residues
SSLIKSNASGELGLQAMPHPQTHGTAQTKPRKSRWPARLDVLQSATGCILAVFLMAHMFFVSTILISQQAFYTVARFFEG
AYFFARPYPALVSCVVAVVIALFIGHAGLAMRKFPAGFRQFNAFRRHKNRFQHSDTSLWWIQAWTGFALFFMATIHLYDM
LTQPALIGPFESADRVWSGNMWPLYLALLFAVELHGGIGLYRLAIKWGWLEGSDPQRSRRRLAIVRYSFSAFFVTLGLVT
LLTYIDLGRVHADHAGERYIPPQSISSVDRH

Specific function: Di-heme cytochrome of the fumarate reductase complex [H]

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004224
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 30774; Mature: 30643

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLIKSNASGELGLQAMPHPQTHGTAQTKPRKSRWPARLDVLQSATGCILAVFLMAHMF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FVSTILISQQAFYTVARFFEGAYFFARPYPALVSCVVAVVIALFIGHAGLAMRKFPAGFR
HHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHH
QFNAFRRHKNRFQHSDTSLWWIQAWTGFALFFMATIHLYDMLTQPALIGPFESADRVWSG
HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
NMWPLYLALLFAVELHGGIGLYRLAIKWGWLEGSDPQRSRRRLAIVRYSFSAFFVTLGLV
CCHHHHHHHHHHHHHCCCCCEEEHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TLLTYIDLGRVHADHAGERYIPPQSISSVDRH
HHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
SSLIKSNASGELGLQAMPHPQTHGTAQTKPRKSRWPARLDVLQSATGCILAVFLMAHMF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FVSTILISQQAFYTVARFFEGAYFFARPYPALVSCVVAVVIALFIGHAGLAMRKFPAGFR
HHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHH
QFNAFRRHKNRFQHSDTSLWWIQAWTGFALFFMATIHLYDMLTQPALIGPFESADRVWSG
HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
NMWPLYLALLFAVELHGGIGLYRLAIKWGWLEGSDPQRSRRRLAIVRYSFSAFFVTLGLV
CCHHHHHHHHHHHHHCCCCCEEEHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TLLTYIDLGRVHADHAGERYIPPQSISSVDRH
HHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]