| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is lon [H]
Identifier: 71907346
GI number: 71907346
Start: 1842675
End: 1845089
Strand: Reverse
Name: lon [H]
Synonym: Daro_1716
Alternate gene names: 71907346
Gene position: 1845089-1842675 (Counterclockwise)
Preceding gene: 71907347
Following gene: 71907345
Centisome position: 40.99
GC content: 60.0
Gene sequence:
>2415_bases ATGTCGAACCCCAACACGCTCCCGGAAACCGTCGAACTGCCGCTGCTGCCGCTGCGCGACGTCGTCGTTTTCCCGCACAT GGTCATCCCGCTGTTCGTCGGCCGCCCAAAATCCATCAAGGCGCTCGAAATGGCCATGGAATCCGGCAAGAACATCCTGC TGGTCGCCCAGAAATCGGCCGCCAAGGATGAACCGGAACCGGAAGACCTGTATCGTATCGGCTGCCTGGCCAACATCCTG CAAATGCTCAAGCTGCCGGACGGCACCGTCAAGGTGCTGGTCGAAGGGACGCAGCGCGCCCGCGTCGAAGCCATCGAGGT GCAATCCTCGGTCTTCATGGCCACTGCCGTTCCGCTGGTTCAGCCGGGTATTGAAGATCACGAAATCGAGGCGATGCGCC GCGCCGTGGTTGCCCAGTTTGACCAATTCGTCAAACTGAACAAGAAGATTCCGCCGGAAGTGTTGTCCTCCATCGCCGGC ATCGAGGATGCCGGTCGCCTGGCCGACACCATCGCCGCTCACCTGCCACTCAAGCTTGAGCAGAAGCAGGAAGTGCTGGA AATGGAAAGCATTCGCGAGCGTATCGACCGCCTGCTCTCCCAACTCGAAGCCGAAATCGACATCCTGCAGGTCGAAAAGC GCATCCGTGGACGCGTCAAGCGCCAGATGGAAAAGAGCCAGCGCGAGTACTACCTGAACGAACAGGTTAAAGCGATCCAG AAGGAACTCGGCGAAGGCGAAGAAGGTGCCGACCTCGAAGAGCTGGACAAGAAGATCAAAGCCGCCGGCATGAGCAAGGA AGGCCTGGCCAAGGCCGAGGGCGAGTTGAAGAAGCTGCGCCTGATGTCGCCGATGTCGGCTGAAGCCACTGTCGTCCGCA ACTTCATTGAGACGCTGATCGGCTTGCCGTGGCGCAAGAAAACGCGCATCAGCAAGGATCTGCGTGAAGCCGAGAAGGTG CTCGATCAGGATCATTACGGCCTGGACAAGGTCAAGGAACGCATTGTCGAGTACCTTGCAGTGCAGCAACGTGTCGACAA GGTCAAGGCGCCGATTCTCTGCCTCGTAGGCCCCCCTGGCGTCGGCAAGACCTCGCTCGGCCAGTCCATCGCCAAGGCGA CGAACCGCAAGTTCGTGCGCATGGCTTTGGGTGGCGTGCGCGATGAAGCCGAGATTCGCGGCCACCGTCGTACTTACATC GGCTCGATGCCGGGCAAGATCCTGAGCAGCCTGACCAAGGTCGGCGTGCGCAATCCACTGTTCCTGCTCGACGAAGTGGA CAAGCTCGGCCAGGATTTCCGCGGCGACCCCTCCTCCGCCCTGCTCGAAGTGCTCGACCCGGAACAGAACCACACCTTCC AGGACCATTATGTCGAGGTCGACTTCGACCTTTCCGACGTGATGTTCGTGGCCACGGCGAACACGCTGAACATTCCCGCC CCGCTGCTTGACCGGATGGAAGTGATTCGCCTGTCGGGTTACACGGAGGACGAGAAGGTCAATATCGCCATGCGCTATCT GCTGCCCAAGCAGATCAAGAACAATGGCCTGAAGAAGACCGAAATTGCCGTCGCCGACAGCGCCGTTCGTGACATCGTCC GTTACTACACCCGTGAAGCCGGCGTTCGCGCCCTGGAACGCGAGATCTCGAAGATTTGCCGCAAGGTGGTCAAGACCCTG GTGCTGAAGAAGCGTGATTCGAAGATCCTGGTCAACGCCAAGAACCTCGACAAATTCCTCGGCGTCCAGCGCTACAGCTA TGGCATGGCGGAAAAGGAAAACCAGGTCGGCCAGGTGACCGGTCTGGCCTGGACCGAAGTCGGCGGCGAACTGCTGACCA TCGAATGCGCCAACATGCCGGGCAAGGGCAATATCCTGCGCACCGGCTCGCTGGGTGACGTGATGAAGGAATCGGTCGAA GCGGCCCGTTCCGTTGTCCGCGCCCGCTCGCGTCGCCTGGGCATCAAGGATGAGGCCTTCGAGAAGACCGATATCCACAT CCACGTTCCGGAAGGCGCCACGCCCAAGGACGGCCCGTCCGCGGGCATCGCCATGACGACGGCACTGGTTTCTTCTTACA CCGGCATTCCGGTTCGTTGCGACGTCTGCATGACTGGCGAAATCACCCTGCGTGGTGAGGTGCTGGCCATCGGTGGTCTG AAGGAAAAACTCCTGGCCGCCGTGCGTGGCGGACTGAAGATTGCCTTGATCCCGGAAGAGAACGTCAAGGACCTCACCGA GATCCCTGACAACATCAAAAACAAGATCGAAATCATCCCGGTCAAGTGGATCGATCAGGTGCTGGAACGTGCACTGGAAC GCAAGCCAGAGGCGCTTCCGGAGCTGGCGGATGCCAATTCCGGGACACCAGCGTCAGCCGAGGCCGCTGCAGCAACAACC CTGCTTACTCATTGA
Upstream 100 bases:
>100_bases GCTGACCAGCCCAAGGTTTCCGGCTCGAACTGAGCCGGGACTTGAATTGCGGTTCCCCGCCCCCACGTAGGGGGCACATA CCTATTTCAAAGGCATCGTA
Downstream 100 bases:
>100_bases TTTTGAAGGAAAGGATGCCGACGTATTAAGTCCGGCAGCCTTTCCTCCAGATCAAAGCCCGGCGATTCCCCGAAAATCCG CTTGACACAAGGATTTCGGC
Product: Lon-A peptidase
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 804; Mature: 803
Protein sequence:
>804_residues MSNPNTLPETVELPLLPLRDVVVFPHMVIPLFVGRPKSIKALEMAMESGKNILLVAQKSAAKDEPEPEDLYRIGCLANIL QMLKLPDGTVKVLVEGTQRARVEAIEVQSSVFMATAVPLVQPGIEDHEIEAMRRAVVAQFDQFVKLNKKIPPEVLSSIAG IEDAGRLADTIAAHLPLKLEQKQEVLEMESIRERIDRLLSQLEAEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAIQ KELGEGEEGADLEELDKKIKAAGMSKEGLAKAEGELKKLRLMSPMSAEATVVRNFIETLIGLPWRKKTRISKDLREAEKV LDQDHYGLDKVKERIVEYLAVQQRVDKVKAPILCLVGPPGVGKTSLGQSIAKATNRKFVRMALGGVRDEAEIRGHRRTYI GSMPGKILSSLTKVGVRNPLFLLDEVDKLGQDFRGDPSSALLEVLDPEQNHTFQDHYVEVDFDLSDVMFVATANTLNIPA PLLDRMEVIRLSGYTEDEKVNIAMRYLLPKQIKNNGLKKTEIAVADSAVRDIVRYYTREAGVRALEREISKICRKVVKTL VLKKRDSKILVNAKNLDKFLGVQRYSYGMAEKENQVGQVTGLAWTEVGGELLTIECANMPGKGNILRTGSLGDVMKESVE AARSVVRARSRRLGIKDEAFEKTDIHIHVPEGATPKDGPSAGIAMTTALVSSYTGIPVRCDVCMTGEITLRGEVLAIGGL KEKLLAAVRGGLKIALIPEENVKDLTEIPDNIKNKIEIIPVKWIDQVLERALERKPEALPELADANSGTPASAEAAAATT LLTH
Sequences:
>Translated_804_residues MSNPNTLPETVELPLLPLRDVVVFPHMVIPLFVGRPKSIKALEMAMESGKNILLVAQKSAAKDEPEPEDLYRIGCLANIL QMLKLPDGTVKVLVEGTQRARVEAIEVQSSVFMATAVPLVQPGIEDHEIEAMRRAVVAQFDQFVKLNKKIPPEVLSSIAG IEDAGRLADTIAAHLPLKLEQKQEVLEMESIRERIDRLLSQLEAEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAIQ KELGEGEEGADLEELDKKIKAAGMSKEGLAKAEGELKKLRLMSPMSAEATVVRNFIETLIGLPWRKKTRISKDLREAEKV LDQDHYGLDKVKERIVEYLAVQQRVDKVKAPILCLVGPPGVGKTSLGQSIAKATNRKFVRMALGGVRDEAEIRGHRRTYI GSMPGKILSSLTKVGVRNPLFLLDEVDKLGQDFRGDPSSALLEVLDPEQNHTFQDHYVEVDFDLSDVMFVATANTLNIPA PLLDRMEVIRLSGYTEDEKVNIAMRYLLPKQIKNNGLKKTEIAVADSAVRDIVRYYTREAGVRALEREISKICRKVVKTL VLKKRDSKILVNAKNLDKFLGVQRYSYGMAEKENQVGQVTGLAWTEVGGELLTIECANMPGKGNILRTGSLGDVMKESVE AARSVVRARSRRLGIKDEAFEKTDIHIHVPEGATPKDGPSAGIAMTTALVSSYTGIPVRCDVCMTGEITLRGEVLAIGGL KEKLLAAVRGGLKIALIPEENVKDLTEIPDNIKNKIEIIPVKWIDQVLERALERKPEALPELADANSGTPASAEAAAATT LLTH >Mature_803_residues SNPNTLPETVELPLLPLRDVVVFPHMVIPLFVGRPKSIKALEMAMESGKNILLVAQKSAAKDEPEPEDLYRIGCLANILQ MLKLPDGTVKVLVEGTQRARVEAIEVQSSVFMATAVPLVQPGIEDHEIEAMRRAVVAQFDQFVKLNKKIPPEVLSSIAGI EDAGRLADTIAAHLPLKLEQKQEVLEMESIRERIDRLLSQLEAEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAIQK ELGEGEEGADLEELDKKIKAAGMSKEGLAKAEGELKKLRLMSPMSAEATVVRNFIETLIGLPWRKKTRISKDLREAEKVL DQDHYGLDKVKERIVEYLAVQQRVDKVKAPILCLVGPPGVGKTSLGQSIAKATNRKFVRMALGGVRDEAEIRGHRRTYIG SMPGKILSSLTKVGVRNPLFLLDEVDKLGQDFRGDPSSALLEVLDPEQNHTFQDHYVEVDFDLSDVMFVATANTLNIPAP LLDRMEVIRLSGYTEDEKVNIAMRYLLPKQIKNNGLKKTEIAVADSAVRDIVRYYTREAGVRALEREISKICRKVVKTLV LKKRDSKILVNAKNLDKFLGVQRYSYGMAEKENQVGQVTGLAWTEVGGELLTIECANMPGKGNILRTGSLGDVMKESVEA ARSVVRARSRRLGIKDEAFEKTDIHIHVPEGATPKDGPSAGIAMTTALVSSYTGIPVRCDVCMTGEITLRGEVLAIGGLK EKLLAAVRGGLKIALIPEENVKDLTEIPDNIKNKIEIIPVKWIDQVLERALERKPEALPELADANSGTPASAEAAAATTL LTH
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI31377667, Length=564, Percent_Identity=45.9219858156028, Blast_Score=514, Evalue=1e-146, Organism=Homo sapiens, GI21396489, Length=669, Percent_Identity=39.7608370702541, Blast_Score=471, Evalue=1e-133, Organism=Escherichia coli, GI1786643, Length=772, Percent_Identity=67.4870466321243, Blast_Score=1058, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=706, Percent_Identity=37.9603399433428, Blast_Score=464, Evalue=1e-130, Organism=Caenorhabditis elegans, GI17556486, Length=789, Percent_Identity=33.3333333333333, Blast_Score=424, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6319449, Length=712, Percent_Identity=38.3426966292135, Blast_Score=483, Evalue=1e-137, Organism=Drosophila melanogaster, GI221513036, Length=606, Percent_Identity=43.8943894389439, Blast_Score=489, Evalue=1e-138, Organism=Drosophila melanogaster, GI24666867, Length=606, Percent_Identity=43.8943894389439, Blast_Score=488, Evalue=1e-138,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 88983; Mature: 88851
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPNTLPETVELPLLPLRDVVVFPHMVIPLFVGRPKSIKALEMAMESGKNILLVAQKSA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCC AKDEPEPEDLYRIGCLANILQMLKLPDGTVKVLVEGTQRARVEAIEVQSSVFMATAVPLV CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH QPGIEDHEIEAMRRAVVAQFDQFVKLNKKIPPEVLSSIAGIEDAGRLADTIAAHLPLKLE CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHH QKQEVLEMESIRERIDRLLSQLEAEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KELGEGEEGADLEELDKKIKAAGMSKEGLAKAEGELKKLRLMSPMSAEATVVRNFIETLI HHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GLPWRKKTRISKDLREAEKVLDQDHYGLDKVKERIVEYLAVQQRVDKVKAPILCLVGPPG CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC VGKTSLGQSIAKATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGKILSSLTKVGVRNPL CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCH FLLDEVDKLGQDFRGDPSSALLEVLDPEQNHTFQDHYVEVDFDLSDVMFVATANTLNIPA HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHHEEEEEECCCCCCCH PLLDRMEVIRLSGYTEDEKVNIAMRYLLPKQIKNNGLKKTEIAVADSAVRDIVRYYTREA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH GVRALEREISKICRKVVKTLVLKKRDSKILVNAKNLDKFLGVQRYSYGMAEKENQVGQVT HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHC GLAWTEVGGELLTIECANMPGKGNILRTGSLGDVMKESVEAARSVVRARSRRLGIKDEAF CEEHHHCCCEEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EKTDIHIHVPEGATPKDGPSAGIAMTTALVSSYTGIPVRCDVCMTGEITLRGEVLAIGGL CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCEEECCCEEEECCH KEKLLAAVRGGLKIALIPEENVKDLTEIPDNIKNKIEIIPVKWIDQVLERALERKPEALP HHHHHHHHHCCCEEEEECCCCHHHHHHCCHHHCCCEEEEEHHHHHHHHHHHHHCCCHHHH ELADANSGTPASAEAAAATTLLTH HHHCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SNPNTLPETVELPLLPLRDVVVFPHMVIPLFVGRPKSIKALEMAMESGKNILLVAQKSA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCC AKDEPEPEDLYRIGCLANILQMLKLPDGTVKVLVEGTQRARVEAIEVQSSVFMATAVPLV CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH QPGIEDHEIEAMRRAVVAQFDQFVKLNKKIPPEVLSSIAGIEDAGRLADTIAAHLPLKLE CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHH QKQEVLEMESIRERIDRLLSQLEAEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KELGEGEEGADLEELDKKIKAAGMSKEGLAKAEGELKKLRLMSPMSAEATVVRNFIETLI HHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GLPWRKKTRISKDLREAEKVLDQDHYGLDKVKERIVEYLAVQQRVDKVKAPILCLVGPPG CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC VGKTSLGQSIAKATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGKILSSLTKVGVRNPL CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCH FLLDEVDKLGQDFRGDPSSALLEVLDPEQNHTFQDHYVEVDFDLSDVMFVATANTLNIPA HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHHEEEEEECCCCCCCH PLLDRMEVIRLSGYTEDEKVNIAMRYLLPKQIKNNGLKKTEIAVADSAVRDIVRYYTREA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH GVRALEREISKICRKVVKTLVLKKRDSKILVNAKNLDKFLGVQRYSYGMAEKENQVGQVT HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHC GLAWTEVGGELLTIECANMPGKGNILRTGSLGDVMKESVEAARSVVRARSRRLGIKDEAF CEEHHHCCCEEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EKTDIHIHVPEGATPKDGPSAGIAMTTALVSSYTGIPVRCDVCMTGEITLRGEVLAIGGL CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCEEECCCEEEECCH KEKLLAAVRGGLKIALIPEENVKDLTEIPDNIKNKIEIIPVKWIDQVLERALERKPEALP HHHHHHHHHCCCEEEEECCCCHHHHHHCCHHHCCCEEEEEHHHHHHHHHHHHHCCCHHHH ELADANSGTPASAEAAAATTLLTH HHHCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8981986; 12620739 [H]