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The map label for this gene is ydfG [C]

Identifier: 71907338

GI number: 71907338

Start: 1835673

End: 1836425

Strand: Reverse

Name: ydfG [C]

Synonym: Daro_1708

Alternate gene names: 71907338

Gene position: 1836425-1835673 (Counterclockwise)

Preceding gene: 71907339

Following gene: 71907337

Centisome position: 40.8

GC content: 49.93

Gene sequence:

>753_bases
ATGAAGCCCAAGAAGAGAATTGTCATCATCGGTGCCACCTCAGCGATCGCTGAACAGTGCGCCCGATTGTGGGCAAAAGA
GAATCCGTCTGAGATGGTTCTGGTCGGTAGAAATCAGGAAAAGATCGAACGGGTTGCGTCAGATCTCAAGGTGCGTGCCC
CGGACACGACAATCACCTGCATCAAGGCAGATTTTCTCGATCCAAACCAAATTCAAACGCTGGTTGAACAGATCTACAAA
GCCGGCAATGTGGATATTGCACTCATTGCGCATGGGTCTCTACCCAACCAAGAAGCGTGTCAGTGCGATCTGAACCTTTG
CCGAGAAGCTATGGATGTAAATGGTATATCGCCCGTGCTGTTTGCCGAGGCTTTTGCCACGCATATGCAAAAGACCAACA
GCGGAACACTTGCTGTCATAGGATCAGTTGCTGGTGATCGGGGCAGAAAATCCAACTATGTCTATGGCGCGGCCAAGGGA
CTAGTTACACGCTACGTACAAGGCTTGCAACACCGCCTGGCAAACACTGACACCAAGGTTGTTTTAATCAAACCCGGGCC
AACCGATACGCCGATGACAGCGCATCTCAAGCAATCCGGTGCCAAACTCGCCGCCGTTGATCGTGTCGCAAGCGAGATTG
TACGTGGCATTGCGAATGGGCAGATGGTTGTGTACGTACCCAAAATTTGGAACGTAATTATGATGGTCATTCGTCATCTG
CCACATTTTGTGTTCAGAAGAATGGATATTTGA

Upstream 100 bases:

>100_bases
AGAACTGTTTGAGGCTGGCTATCCGCGCTTAGCCGAATTTATCCAATATCGAGACCCTGGCATCAGCTCAGGTCTATCAC
GTCGCCTAATGGGAAGTTGA

Downstream 100 bases:

>100_bases
ATATGTTGCCTAATGGCAAGCGAAATTATTTAATTTTTTTCTTTGTAGCAGCTGCCTTATTTTGGGTGCTAGCCATTGCG
GGTGCATTCCGATCATATTC

Product: Short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKPKKRIVIIGATSAIAEQCARLWAKENPSEMVLVGRNQEKIERVASDLKVRAPDTTITCIKADFLDPNQIQTLVEQIYK
AGNVDIALIAHGSLPNQEACQCDLNLCREAMDVNGISPVLFAEAFATHMQKTNSGTLAVIGSVAGDRGRKSNYVYGAAKG
LVTRYVQGLQHRLANTDTKVVLIKPGPTDTPMTAHLKQSGAKLAAVDRVASEIVRGIANGQMVVYVPKIWNVIMMVIRHL
PHFVFRRMDI

Sequences:

>Translated_250_residues
MKPKKRIVIIGATSAIAEQCARLWAKENPSEMVLVGRNQEKIERVASDLKVRAPDTTITCIKADFLDPNQIQTLVEQIYK
AGNVDIALIAHGSLPNQEACQCDLNLCREAMDVNGISPVLFAEAFATHMQKTNSGTLAVIGSVAGDRGRKSNYVYGAAKG
LVTRYVQGLQHRLANTDTKVVLIKPGPTDTPMTAHLKQSGAKLAAVDRVASEIVRGIANGQMVVYVPKIWNVIMMVIRHL
PHFVFRRMDI
>Mature_250_residues
MKPKKRIVIIGATSAIAEQCARLWAKENPSEMVLVGRNQEKIERVASDLKVRAPDTTITCIKADFLDPNQIQTLVEQIYK
AGNVDIALIAHGSLPNQEACQCDLNLCREAMDVNGISPVLFAEAFATHMQKTNSGTLAVIGSVAGDRGRKSNYVYGAAKG
LVTRYVQGLQHRLANTDTKVVLIKPGPTDTPMTAHLKQSGAKLAAVDRVASEIVRGIANGQMVVYVPKIWNVIMMVIRHL
PHFVFRRMDI

Specific function: Involved in the epimerization of decaprenylphosphoryl ribose (DPR) to decaprenylphosphoryl arabinose (DPA) a precursor for arabinan synthesis in mycobacterial cell wall biosynthesis. Probably catalyzes the reduction of at C-2 of decaprenylphosphoryl 2-ket

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323882, Length=257, Percent_Identity=23.7354085603113, Blast_Score=66, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21358495, Length=264, Percent_Identity=26.1363636363636, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27399; Mature: 27399

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKKRIVIIGATSAIAEQCARLWAKENPSEMVLVGRNQEKIERVASDLKVRAPDTTITC
CCCCCEEEEEECHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCEEECCCCEEEE
IKADFLDPNQIQTLVEQIYKAGNVDIALIAHGSLPNQEACQCDLNLCREAMDVNGISPVL
EEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHH
FAEAFATHMQKTNSGTLAVIGSVAGDRGRKSNYVYGAAKGLVTRYVQGLQHRLANTDTKV
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEE
VLIKPGPTDTPMTAHLKQSGAKLAAVDRVASEIVRGIANGQMVVYVPKIWNVIMMVIRHL
EEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH
PHFVFRRMDI
HHHHHHHCCC
>Mature Secondary Structure
MKPKKRIVIIGATSAIAEQCARLWAKENPSEMVLVGRNQEKIERVASDLKVRAPDTTITC
CCCCCEEEEEECHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCEEECCCCEEEE
IKADFLDPNQIQTLVEQIYKAGNVDIALIAHGSLPNQEACQCDLNLCREAMDVNGISPVL
EEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHH
FAEAFATHMQKTNSGTLAVIGSVAGDRGRKSNYVYGAAKGLVTRYVQGLQHRLANTDTKV
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEE
VLIKPGPTDTPMTAHLKQSGAKLAAVDRVASEIVRGIANGQMVVYVPKIWNVIMMVIRHL
EEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH
PHFVFRRMDI
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]