| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907337
Identifier: 71907337
GI number: 71907337
Start: 1833571
End: 1835670
Strand: Reverse
Name: 71907337
Synonym: Daro_1707
Alternate gene names: NA
Gene position: 1835670-1833571 (Counterclockwise)
Preceding gene: 71907338
Following gene: 71907336
Centisome position: 40.78
GC content: 43.52
Gene sequence:
>2100_bases ATGTTGCCTAATGGCAAGCGAAATTATTTAATTTTTTTCTTTGTAGCAGCTGCCTTATTTTGGGTGCTAGCCATTGCGGG TGCATTCCGATCATATTCGCCTATTCCATTAGGGGACATGTGGGATGGCTATCTTGACTTTTACATTAAAGCGAGTGCGG GCGACTGGGGTGTCTGGTGGAAAACTCACAACGAGCACCGCATTGTCCTTTCACGCCTCTTTTTCTGGATGGATCTCTCA TGGTTTAACGGGTCCGTCTGGTTTCTATTGGCTTTAAATTATGCTCTTCTTGTATTTTCGTGTTTTATTTTCTGGATTGC GCTAAAAGAAAGATTGCCGGAACAGTATCAAATTCCTGGAATTTTTATCGCCATTTGGTTGAGCTCATGGTCACAGAACG AAAATCTCACCTGGGGTTTTCAGAGCCAATTCATTCTAGCTCAATTGCTGCCCTTGGTAGCCTTCGGCATGCTGCACAGA GCTGCTTCTAATAACTCTATTTACAATAATTACTTCATTGGATCATGTTTGATAGGGGTCTTATCGCTTGGAACCATGGC TAATGGTGTAATCGTTTTGCCGTTAATGGCCGCATATGCAATTATTACTCGCATCGGCTTATGGAGAGTTCTTACCCTTG CGACTTTATCCTGCATCGGATTGCTGGCTTACTTTTACGATTACACGTCACCCGCTTACCATGGGTCTCTTTCCAGCTCT TTAAAAGAAAACCCATTCGGCCTTATTCTCTACGTAATAACGTATATCGGCGGACCATTTTACCATATTGCCGGGGGAAA GTTAGGGGGAGTTATTCTGGCCCAAGTTGCAGGCGGCGCCCTAATTTTAATTTCAACTTATATCTCTTGGACGTCATTAT TAAAATCAAAGAGGGACACGTTAGAATTAGCTTTGCTGTTTTTTATATTATACATTGGTGGAACTGCACTCGGGACCGGC GGAGGAAGGCTTATTTTTGGTGTTGACCAAGCACTTTCATCACGCTACTCGACGCCATCACTAATGGCTTGGGCTGCATT ATTGGTAATAATCGCGCCAAAGCTCGCCACATCATCTGAGAAAATAAAGTGGCAATTATGGCTGCCTTTATCAGCCCTTA TCCTTGCAATGCTTCCGTTGCAATTCAAGGCTTGGCGTTCAGGCGATCAGAGTGTGTTTGAACGAGGTATTGCCGGGCTT GCTGTTGCAATTGGCGTCAACGATCAACTACAAATTAGCCGTATCTATCCTTCTGCTGAGCGAGCGATATCGATTGGCAA GGCCGCCTCTGAACAAGAGTTGTCGTATTTCTCTCGAACAGAATACAAAAACATTAAAAATGCCATTGGAAAACAAATTA ATGGGCCTTCCGAAATATCAAAGGTTTGTCAAGGGCACATTGACTTTATAGAACCGATTGAGAACGAAAATAATTACATG CGAGCGGGTGGTTGGATATTTAATCAATCAGAAAATGTCTCTCCGAGGGCTATTTGGTTAATCGATCAAAAGGGAGTCGT TGTCGGCTATGGGTTAGTAGGCCAGCCTAGACCTGATGTCGCAGAGGCTGTTGACAAAAAAGCTTCCAAATCCGGATTTA AAGGCTATTTTTTGAGTGAGGCGCAAGGTGCTTCGGTAATAGTATTTGACCCAATTAGCAGGTGTGGTTTTTCTTCGGTA CTGCCTGAGATATTTTTTACCTTAACAACTAACGGGAATAAAACCCAAGTAACTGTTGATGCGAACCAAGTTCTGCAAAA CAACCAGTGGATTGGAACTGACTACCAAAAATCCAGAATTGACGGGTTGGTCGTATTTGGCTCCTTCATTCAAGCCGATA GAGACAAAGGCGAAATATCGCTACAACTTAAGCGTGGAGATCGAATCCTCTATCGATCAGGGCCAACTTTTGGCAAGCAA TACTTATCGTTGAGTTTTTCAAATACAGAAATCGCGCTCCCTGTTTCACTAGAGTGGCGAGTACTTGATTTTTCGAGTAA GGCTCTGCCAGATAGTTTTATCGCGACTTTCCGAGATAATGGCGAAAACCGGGGCGAATGGTCTGCCATAGCTGTTTTAG CGTCTGAGGTTGTAAAATGA
Upstream 100 bases:
>100_bases ATGGGCAGATGGTTGTGTACGTACCCAAAATTTGGAACGTAATTATGATGGTCATTCGTCATCTGCCACATTTTGTGTTC AGAAGAATGGATATTTGAAT
Downstream 100 bases:
>100_bases AAATCGTTCTCCCTGGCGGAGCTGGTTTAGTCGGTCAAAATTTAGTGGCTCGGCTAAAATCGAAAGGCTACTCAAACATC GTTGTGCTCGATAAACATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 699; Mature: 699
Protein sequence:
>699_residues MLPNGKRNYLIFFFVAAALFWVLAIAGAFRSYSPIPLGDMWDGYLDFYIKASAGDWGVWWKTHNEHRIVLSRLFFWMDLS WFNGSVWFLLALNYALLVFSCFIFWIALKERLPEQYQIPGIFIAIWLSSWSQNENLTWGFQSQFILAQLLPLVAFGMLHR AASNNSIYNNYFIGSCLIGVLSLGTMANGVIVLPLMAAYAIITRIGLWRVLTLATLSCIGLLAYFYDYTSPAYHGSLSSS LKENPFGLILYVITYIGGPFYHIAGGKLGGVILAQVAGGALILISTYISWTSLLKSKRDTLELALLFFILYIGGTALGTG GGRLIFGVDQALSSRYSTPSLMAWAALLVIIAPKLATSSEKIKWQLWLPLSALILAMLPLQFKAWRSGDQSVFERGIAGL AVAIGVNDQLQISRIYPSAERAISIGKAASEQELSYFSRTEYKNIKNAIGKQINGPSEISKVCQGHIDFIEPIENENNYM RAGGWIFNQSENVSPRAIWLIDQKGVVVGYGLVGQPRPDVAEAVDKKASKSGFKGYFLSEAQGASVIVFDPISRCGFSSV LPEIFFTLTTNGNKTQVTVDANQVLQNNQWIGTDYQKSRIDGLVVFGSFIQADRDKGEISLQLKRGDRILYRSGPTFGKQ YLSLSFSNTEIALPVSLEWRVLDFSSKALPDSFIATFRDNGENRGEWSAIAVLASEVVK
Sequences:
>Translated_699_residues MLPNGKRNYLIFFFVAAALFWVLAIAGAFRSYSPIPLGDMWDGYLDFYIKASAGDWGVWWKTHNEHRIVLSRLFFWMDLS WFNGSVWFLLALNYALLVFSCFIFWIALKERLPEQYQIPGIFIAIWLSSWSQNENLTWGFQSQFILAQLLPLVAFGMLHR AASNNSIYNNYFIGSCLIGVLSLGTMANGVIVLPLMAAYAIITRIGLWRVLTLATLSCIGLLAYFYDYTSPAYHGSLSSS LKENPFGLILYVITYIGGPFYHIAGGKLGGVILAQVAGGALILISTYISWTSLLKSKRDTLELALLFFILYIGGTALGTG GGRLIFGVDQALSSRYSTPSLMAWAALLVIIAPKLATSSEKIKWQLWLPLSALILAMLPLQFKAWRSGDQSVFERGIAGL AVAIGVNDQLQISRIYPSAERAISIGKAASEQELSYFSRTEYKNIKNAIGKQINGPSEISKVCQGHIDFIEPIENENNYM RAGGWIFNQSENVSPRAIWLIDQKGVVVGYGLVGQPRPDVAEAVDKKASKSGFKGYFLSEAQGASVIVFDPISRCGFSSV LPEIFFTLTTNGNKTQVTVDANQVLQNNQWIGTDYQKSRIDGLVVFGSFIQADRDKGEISLQLKRGDRILYRSGPTFGKQ YLSLSFSNTEIALPVSLEWRVLDFSSKALPDSFIATFRDNGENRGEWSAIAVLASEVVK >Mature_699_residues MLPNGKRNYLIFFFVAAALFWVLAIAGAFRSYSPIPLGDMWDGYLDFYIKASAGDWGVWWKTHNEHRIVLSRLFFWMDLS WFNGSVWFLLALNYALLVFSCFIFWIALKERLPEQYQIPGIFIAIWLSSWSQNENLTWGFQSQFILAQLLPLVAFGMLHR AASNNSIYNNYFIGSCLIGVLSLGTMANGVIVLPLMAAYAIITRIGLWRVLTLATLSCIGLLAYFYDYTSPAYHGSLSSS LKENPFGLILYVITYIGGPFYHIAGGKLGGVILAQVAGGALILISTYISWTSLLKSKRDTLELALLFFILYIGGTALGTG GGRLIFGVDQALSSRYSTPSLMAWAALLVIIAPKLATSSEKIKWQLWLPLSALILAMLPLQFKAWRSGDQSVFERGIAGL AVAIGVNDQLQISRIYPSAERAISIGKAASEQELSYFSRTEYKNIKNAIGKQINGPSEISKVCQGHIDFIEPIENENNYM RAGGWIFNQSENVSPRAIWLIDQKGVVVGYGLVGQPRPDVAEAVDKKASKSGFKGYFLSEAQGASVIVFDPISRCGFSSV LPEIFFTLTTNGNKTQVTVDANQVLQNNQWIGTDYQKSRIDGLVVFGSFIQADRDKGEISLQLKRGDRILYRSGPTFGKQ YLSLSFSNTEIALPVSLEWRVLDFSSKALPDSFIATFRDNGENRGEWSAIAVLASEVVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77509; Mature: 77509
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPNGKRNYLIFFFVAAALFWVLAIAGAFRSYSPIPLGDMWDGYLDFYIKASAGDWGVWW CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEE KTHNEHRIVLSRLFFWMDLSWFNGSVWFLLALNYALLVFSCFIFWIALKERLPEQYQIPG EECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCE IFIAIWLSSWSQNENLTWGFQSQFILAQLLPLVAFGMLHRAASNNSIYNNYFIGSCLIGV EEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH LSLGTMANGVIVLPLMAAYAIITRIGLWRVLTLATLSCIGLLAYFYDYTSPAYHGSLSSS HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LKENPFGLILYVITYIGGPFYHIAGGKLGGVILAQVAGGALILISTYISWTSLLKSKRDT HCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHH LELALLFFILYIGGTALGTGGGRLIFGVDQALSSRYSTPSLMAWAALLVIIAPKLATSSE HHHHHHHHHHHHCCCEEECCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC KIKWQLWLPLSALILAMLPLQFKAWRSGDQSVFERGIAGLAVAIGVNDQLQISRIYPSAE CEEEEEECCHHHHHHHHHCHHHHHHCCCCHHHHHCCCCCEEEEEECCCCEEEEEECCCHH RAISIGKAASEQELSYFSRTEYKNIKNAIGKQINGPSEISKVCQGHIDFIEPIENENNYM HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHCCCCCCCCEE RAGGWIFNQSENVSPRAIWLIDQKGVVVGYGLVGQPRPDVAEAVDKKASKSGFKGYFLSE EECCEEECCCCCCCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEC AQGASVIVFDPISRCGFSSVLPEIFFTLTTNGNKTQVTVDANQVLQNNQWIGTDYQKSRI CCCCEEEEECCHHHCCHHHHHHHHEEEEECCCCEEEEEEEHHHHHCCCCCCCCCCHHHCC DGLVVFGSFIQADRDKGEISLQLKRGDRILYRSGPTFGKQYLSLSFSNTEIALPVSLEWR CEEEEEEHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCHHEEEEECCCEEEEEEEEEEE VLDFSSKALPDSFIATFRDNGENRGEWSAIAVLASEVVK EEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MLPNGKRNYLIFFFVAAALFWVLAIAGAFRSYSPIPLGDMWDGYLDFYIKASAGDWGVWW CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEE KTHNEHRIVLSRLFFWMDLSWFNGSVWFLLALNYALLVFSCFIFWIALKERLPEQYQIPG EECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCE IFIAIWLSSWSQNENLTWGFQSQFILAQLLPLVAFGMLHRAASNNSIYNNYFIGSCLIGV EEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH LSLGTMANGVIVLPLMAAYAIITRIGLWRVLTLATLSCIGLLAYFYDYTSPAYHGSLSSS HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LKENPFGLILYVITYIGGPFYHIAGGKLGGVILAQVAGGALILISTYISWTSLLKSKRDT HCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHH LELALLFFILYIGGTALGTGGGRLIFGVDQALSSRYSTPSLMAWAALLVIIAPKLATSSE HHHHHHHHHHHHCCCEEECCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC KIKWQLWLPLSALILAMLPLQFKAWRSGDQSVFERGIAGLAVAIGVNDQLQISRIYPSAE CEEEEEECCHHHHHHHHHCHHHHHHCCCCHHHHHCCCCCEEEEEECCCCEEEEEECCCHH RAISIGKAASEQELSYFSRTEYKNIKNAIGKQINGPSEISKVCQGHIDFIEPIENENNYM HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHCCCCCCCCEE RAGGWIFNQSENVSPRAIWLIDQKGVVVGYGLVGQPRPDVAEAVDKKASKSGFKGYFLSE EECCEEECCCCCCCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEC AQGASVIVFDPISRCGFSSVLPEIFFTLTTNGNKTQVTVDANQVLQNNQWIGTDYQKSRI CCCCEEEEECCHHHCCHHHHHHHHEEEEECCCCEEEEEEEHHHHHCCCCCCCCCCHHHCC DGLVVFGSFIQADRDKGEISLQLKRGDRILYRSGPTFGKQYLSLSFSNTEIALPVSLEWR CEEEEEEHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCHHEEEEECCCEEEEEEEEEEE VLDFSSKALPDSFIATFRDNGENRGEWSAIAVLASEVVK EEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA