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The map label for this gene is qseB [H]

Identifier: 71907213

GI number: 71907213

Start: 1699425

End: 1700096

Strand: Reverse

Name: qseB [H]

Synonym: Daro_1581

Alternate gene names: 71907213

Gene position: 1700096-1699425 (Counterclockwise)

Preceding gene: 71907214

Following gene: 71907212

Centisome position: 37.77

GC content: 57.74

Gene sequence:

>672_bases
ATGCGCATCCTGATCGTTGAAGATGACAATCTTGTCGCCCAGGGCCTGAAGCAGGGACTTCAGCAACTGGGCTACACGGT
CGATGTTGCCCGCAGTGCGGAAGAAGCCGAGGCGTTCGCAGTGGGTGAGGATTTTGACATTACACTGGTCGATATCGGGC
TACCCAAAGCCGATGGTCTGCATTTCATCCGGCAACTTAGAACGCGAGGAAATCGCCTGCCGGCATTGATCCTGACGGCC
AGAGACAGCATGGACGACACAATCAAGGGACTGGATGCCGGGGCGGACGATTACATGACCAAGCCCTATCGCCTCCCGGA
AGTTGCCGCCCGGATAAGGGCTCTGATCCGCCGCTCAAACGCCGTTGTCGACGCCTGCCTGCACCACGATGGCATACGCA
TGGACACCCGCAGCCACACGGCAACGCTGAACGGTGAACCGCTCGACCTGACAAATCGCGAATGGGCCATCCTGGAAATG
CTGCTGATGGCGTCCCCCGCCGTCGTCAGCAAAGACAAACTGGTTCAGGGACTGGCCGGCTGGGACAAGGACATCACGCC
AAATGCCATCGAAGTTCATGTCTCCAGGCTACGCCAGAAGCTCACCACTGGCACTATCGTCATCCGAACAGTTCGCGGTA
TTGGATATCGTGTCGATGCAGCCCAAAACTAA

Upstream 100 bases:

>100_bases
TGGCATCGCCCATAAGGAACCCGAAGGGGGAGTTGAGCCTCGTGATGTCGTGGGAAAATAGCGAAGCAACAGATTCACGA
CAACACTGCAGCTAAAACAT

Downstream 100 bases:

>100_bases
CCCTCCGCGACAACGTGAGCCCTTGTCGCTGAGACAGCGCCTGATCCTGGCGCTGTTGACTCCGCTGATCGTGATACTGG
CATCGTCCTCGATCTTCGAT

Product: response regulator receiver:transcriptional regulatory protein, C-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MRILIVEDDNLVAQGLKQGLQQLGYTVDVARSAEEAEAFAVGEDFDITLVDIGLPKADGLHFIRQLRTRGNRLPALILTA
RDSMDDTIKGLDAGADDYMTKPYRLPEVAARIRALIRRSNAVVDACLHHDGIRMDTRSHTATLNGEPLDLTNREWAILEM
LLMASPAVVSKDKLVQGLAGWDKDITPNAIEVHVSRLRQKLTTGTIVIRTVRGIGYRVDAAQN

Sequences:

>Translated_223_residues
MRILIVEDDNLVAQGLKQGLQQLGYTVDVARSAEEAEAFAVGEDFDITLVDIGLPKADGLHFIRQLRTRGNRLPALILTA
RDSMDDTIKGLDAGADDYMTKPYRLPEVAARIRALIRRSNAVVDACLHHDGIRMDTRSHTATLNGEPLDLTNREWAILEM
LLMASPAVVSKDKLVQGLAGWDKDITPNAIEVHVSRLRQKLTTGTIVIRTVRGIGYRVDAAQN
>Mature_223_residues
MRILIVEDDNLVAQGLKQGLQQLGYTVDVARSAEEAEAFAVGEDFDITLVDIGLPKADGLHFIRQLRTRGNRLPALILTA
RDSMDDTIKGLDAGADDYMTKPYRLPEVAARIRALIRRSNAVVDACLHHDGIRMDTRSHTATLNGEPLDLTNREWAILEM
LLMASPAVVSKDKLVQGLAGWDKDITPNAIEVHVSRLRQKLTTGTIVIRTVRGIGYRVDAAQN

Specific function: Member of a two-component regulatory system qseB/qseC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=216, Percent_Identity=43.5185185185185, Blast_Score=185, Evalue=2e-48,
Organism=Escherichia coli, GI1790552, Length=222, Percent_Identity=41.4414414414414, Blast_Score=169, Evalue=1e-43,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=39.9082568807339, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI87082012, Length=225, Percent_Identity=32.8888888888889, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=34.0807174887892, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=32.7354260089686, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=31.5555555555556, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI2367329, Length=233, Percent_Identity=35.1931330472103, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1786911, Length=227, Percent_Identity=32.5991189427313, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787229, Length=223, Percent_Identity=31.8385650224215, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1788394, Length=224, Percent_Identity=31.6964285714286, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1790860, Length=219, Percent_Identity=31.5068493150685, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=29.5652173913043, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI145693140, Length=230, Percent_Identity=27.8260869565217, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788550, Length=209, Percent_Identity=24.8803827751196, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI48994928, Length=118, Percent_Identity=36.4406779661017, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1790299, Length=197, Percent_Identity=24.3654822335025, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787487, Length=103, Percent_Identity=32.0388349514563, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1790437, Length=202, Percent_Identity=27.2277227722772, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24605; Mature: 24605

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILIVEDDNLVAQGLKQGLQQLGYTVDVARSAEEAEAFAVGEDFDITLVDIGLPKADGL
CEEEEEECCCHHHHHHHHHHHHCCCEEEHHCCHHHHHHEECCCCCEEEEEEECCCCCCHH
HFIRQLRTRGNRLPALILTARDSMDDTIKGLDAGADDYMTKPYRLPEVAARIRALIRRSN
HHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHH
AVVDACLHHDGIRMDTRSHTATLNGEPLDLTNREWAILEMLLMASPAVVSKDKLVQGLAG
HHHHHHHHCCCCEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHC
WDKDITPNAIEVHVSRLRQKLTTGTIVIRTVRGIGYRVDAAQN
CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHCCCEEECCCCC
>Mature Secondary Structure
MRILIVEDDNLVAQGLKQGLQQLGYTVDVARSAEEAEAFAVGEDFDITLVDIGLPKADGL
CEEEEEECCCHHHHHHHHHHHHCCCEEEHHCCHHHHHHEECCCCCEEEEEEECCCCCCHH
HFIRQLRTRGNRLPALILTARDSMDDTIKGLDAGADDYMTKPYRLPEVAARIRALIRRSN
HHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHH
AVVDACLHHDGIRMDTRSHTATLNGEPLDLTNREWAILEMLLMASPAVVSKDKLVQGLAG
HHHHHHHHCCCCEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHC
WDKDITPNAIEVHVSRLRQKLTTGTIVIRTVRGIGYRVDAAQN
CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]