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The map label for this gene is qseC [H]

Identifier: 71907212

GI number: 71907212

Start: 1698053

End: 1699441

Strand: Reverse

Name: qseC [H]

Synonym: Daro_1580

Alternate gene names: 71907212

Gene position: 1699441-1698053 (Counterclockwise)

Preceding gene: 71907213

Following gene: 71907211

Centisome position: 37.76

GC content: 56.44

Gene sequence:

>1389_bases
ATGCAGCCCAAAACTAACCCTCCGCGACAACGTGAGCCCTTGTCGCTGAGACAGCGCCTGATCCTGGCGCTGTTGACTCC
GCTGATCGTGATACTGGCATCGTCCTCGATCTTCGATTACCAGCTGGCGAAAAAGACAGCGAATCGCGCCCATGACCAGG
CGCTGGCCGACAATGTCTTCGATCTGGAATCGCATATCAAAAGACAAAATCCGTCGCCTACCCTCGACCTGACCGAAGAA
GCCGAAGCCATGCTGCGTAGCAACGCACCCGACATGCTGTATTTTTCGGTCAGCGACTCGAGTGGAAAAGTACTGGCGGG
CGATACCGACCTTCCCAAGACGCACTCCCAAAAAAGCGAACAGGTCGAGTTCCGTGATGGAATCTATCAGGACAAGGCTG
TCAGAATTGCCTCCCATCGGGCCAACATCAGGAACCGGGAGTTTCAGATCGTGGTTCTGGAAACCACTGAAAAACGCCAA
CAGGCCAGCTCAAGGATTCTGACGGCGATGGTCATTCCCAACCTCGCCGTCATCCTGGCCACCATGCTGGCCGTAATCTT
TGGTGTCCGGCAAGGCCTCCTCCCCCTGCGCGAGGTCGAGCACGATATTGCCGTTCGCTCAGCCAATGACCTTCACGAAA
TCGAGCTTTCCGGAACCCCCTCCGAAATCCGCCCGATGCTCCACCGTCTCAATGAGCTTTTTGCGCTCGTGCGCGAATCA
GTCGAAGTTCAGCAGCGCTTCATCGCCGACGCTGCGCATCAGTTACGTACCCCCCTGGCCGGCCTGCAGACACAACTGGA
TTTGGCCACCTCCGAAGGCGCTTTTAGCAACAACGTTGAGCGCCTCCAGTTGATCGAAGAATCGACTGCGCGTATCGGCC
ATTTGCTCACCCAGTTGCTCACCTACGCCAGGGCTGAAACGTCAAACGCCATCAAGGCAAACTTTGAGCCCGTACAACTC
AACCTGCTGGCCGAAAATTCCGCTTCGATCTTCCTTGATGCGGCCTTGGCAAAAAACATCGATCTGGGCTTCGAAATATC
GCCGACGACGACCCTGGGATTCCCCTGGATGCTGCAGGAGGCACTATCCAACCTGATCGACAACGCCATCCGCTATACCC
CGCCCGGCGGCATCATCACGGTTCGCAGCAGTAGCGCAGACAAGCAAGCCTGCATTGAAGTCGAAGATAGCGGCCCCGGC
ATTCCTGACGAGCATCTCAAGCACGTATTTGAACGCTTCTACCGCATCCCCGGCTCCCCGGGTCATGGGTGCGGACTAGG
GCTGGCGATAGTCAGCGAAATTGTCCAGCTTCATGGTGCCAGAATCGATCTCGAAAAAAGCCCGCAGGGTGGCTTGCGAA
TTCGCATCACTTTTCAAGCGCTGGACTAA

Upstream 100 bases:

>100_bases
ACGCCAAATGCCATCGAAGTTCATGTCTCCAGGCTACGCCAGAAGCTCACCACTGGCACTATCGTCATCCGAACAGTTCG
CGGTATTGGATATCGTGTCG

Downstream 100 bases:

>100_bases
TCTCGAATAGCAAATGCCATTACCCGACATACTTCGCTTGGAGATACGCCAAGCACGCGACGAGCTTGGTCGAAAAAGCG
GGTAAAACAGGCAAGCCCAA

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MQPKTNPPRQREPLSLRQRLILALLTPLIVILASSSIFDYQLAKKTANRAHDQALADNVFDLESHIKRQNPSPTLDLTEE
AEAMLRSNAPDMLYFSVSDSSGKVLAGDTDLPKTHSQKSEQVEFRDGIYQDKAVRIASHRANIRNREFQIVVLETTEKRQ
QASSRILTAMVIPNLAVILATMLAVIFGVRQGLLPLREVEHDIAVRSANDLHEIELSGTPSEIRPMLHRLNELFALVRES
VEVQQRFIADAAHQLRTPLAGLQTQLDLATSEGAFSNNVERLQLIEESTARIGHLLTQLLTYARAETSNAIKANFEPVQL
NLLAENSASIFLDAALAKNIDLGFEISPTTTLGFPWMLQEALSNLIDNAIRYTPPGGIITVRSSSADKQACIEVEDSGPG
IPDEHLKHVFERFYRIPGSPGHGCGLGLAIVSEIVQLHGARIDLEKSPQGGLRIRITFQALD

Sequences:

>Translated_462_residues
MQPKTNPPRQREPLSLRQRLILALLTPLIVILASSSIFDYQLAKKTANRAHDQALADNVFDLESHIKRQNPSPTLDLTEE
AEAMLRSNAPDMLYFSVSDSSGKVLAGDTDLPKTHSQKSEQVEFRDGIYQDKAVRIASHRANIRNREFQIVVLETTEKRQ
QASSRILTAMVIPNLAVILATMLAVIFGVRQGLLPLREVEHDIAVRSANDLHEIELSGTPSEIRPMLHRLNELFALVRES
VEVQQRFIADAAHQLRTPLAGLQTQLDLATSEGAFSNNVERLQLIEESTARIGHLLTQLLTYARAETSNAIKANFEPVQL
NLLAENSASIFLDAALAKNIDLGFEISPTTTLGFPWMLQEALSNLIDNAIRYTPPGGIITVRSSSADKQACIEVEDSGPG
IPDEHLKHVFERFYRIPGSPGHGCGLGLAIVSEIVQLHGARIDLEKSPQGGLRIRITFQALD
>Mature_462_residues
MQPKTNPPRQREPLSLRQRLILALLTPLIVILASSSIFDYQLAKKTANRAHDQALADNVFDLESHIKRQNPSPTLDLTEE
AEAMLRSNAPDMLYFSVSDSSGKVLAGDTDLPKTHSQKSEQVEFRDGIYQDKAVRIASHRANIRNREFQIVVLETTEKRQ
QASSRILTAMVIPNLAVILATMLAVIFGVRQGLLPLREVEHDIAVRSANDLHEIELSGTPSEIRPMLHRLNELFALVRES
VEVQQRFIADAAHQLRTPLAGLQTQLDLATSEGAFSNNVERLQLIEESTARIGHLLTQLLTYARAETSNAIKANFEPVQL
NLLAENSASIFLDAALAKNIDLGFEISPTTTLGFPWMLQEALSNLIDNAIRYTPPGGIITVRSSSADKQACIEVEDSGPG
IPDEHLKHVFERFYRIPGSPGHGCGLGLAIVSEIVQLHGARIDLEKSPQGGLRIRITFQALD

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. May activate qseB by phosphorylation [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=459, Percent_Identity=28.7581699346405, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1786783, Length=303, Percent_Identity=33.3333333333333, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1790551, Length=285, Percent_Identity=31.2280701754386, Blast_Score=111, Evalue=8e-26,
Organism=Escherichia coli, GI1788393, Length=271, Percent_Identity=29.1512915129151, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1786600, Length=254, Percent_Identity=32.2834645669291, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI1790346, Length=249, Percent_Identity=31.7269076305221, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1787374, Length=490, Percent_Identity=25.3061224489796, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1790861, Length=241, Percent_Identity=30.2904564315353, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1788279, Length=287, Percent_Identity=28.5714285714286, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI87081816, Length=209, Percent_Identity=30.1435406698565, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI87082128, Length=278, Percent_Identity=27.6978417266187, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1789808, Length=244, Percent_Identity=31.1475409836066, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI145693157, Length=237, Percent_Identity=27.4261603375527, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1789149, Length=224, Percent_Identity=26.3392857142857, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787894, Length=232, Percent_Identity=29.7413793103448, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI48994928, Length=224, Percent_Identity=26.7857142857143, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1786912, Length=258, Percent_Identity=28.6821705426357, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1788713, Length=225, Percent_Identity=26.2222222222222, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1788549, Length=210, Percent_Identity=26.1904761904762, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1790436, Length=199, Percent_Identity=28.643216080402, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 51079; Mature: 51079

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPKTNPPRQREPLSLRQRLILALLTPLIVILASSSIFDYQLAKKTANRAHDQALADNVF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
DLESHIKRQNPSPTLDLTEEAEAMLRSNAPDMLYFSVSDSSGKVLAGDTDLPKTHSQKSE
HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCHH
QVEFRDGIYQDKAVRIASHRANIRNREFQIVVLETTEKRQQASSRILTAMVIPNLAVILA
CCHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
TMLAVIFGVRQGLLPLREVEHDIAVRSANDLHEIELSGTPSEIRPMLHRLNELFALVRES
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
VEVQQRFIADAAHQLRTPLAGLQTQLDLATSEGAFSNNVERLQLIEESTARIGHLLTQLL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TYARAETSNAIKANFEPVQLNLLAENSASIFLDAALAKNIDLGFEISPTTTLGFPWMLQE
HHHHHCCCCCEECCCCEEEEEEEECCCCCEEEEHHHHCCCCCCEEECCCCCCCCHHHHHH
ALSNLIDNAIRYTPPGGIITVRSSSADKQACIEVEDSGPGIPDEHLKHVFERFYRIPGSP
HHHHHHHHHEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCC
GHGCGLGLAIVSEIVQLHGARIDLEKSPQGGLRIRITFQALD
CCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MQPKTNPPRQREPLSLRQRLILALLTPLIVILASSSIFDYQLAKKTANRAHDQALADNVF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
DLESHIKRQNPSPTLDLTEEAEAMLRSNAPDMLYFSVSDSSGKVLAGDTDLPKTHSQKSE
HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCHH
QVEFRDGIYQDKAVRIASHRANIRNREFQIVVLETTEKRQQASSRILTAMVIPNLAVILA
CCHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
TMLAVIFGVRQGLLPLREVEHDIAVRSANDLHEIELSGTPSEIRPMLHRLNELFALVRES
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
VEVQQRFIADAAHQLRTPLAGLQTQLDLATSEGAFSNNVERLQLIEESTARIGHLLTQLL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TYARAETSNAIKANFEPVQLNLLAENSASIFLDAALAKNIDLGFEISPTTTLGFPWMLQE
HHHHHCCCCCEECCCCEEEEEEEECCCCCEEEEHHHHCCCCCCEEECCCCCCCCHHHHHH
ALSNLIDNAIRYTPPGGIITVRSSSADKQACIEVEDSGPGIPDEHLKHVFERFYRIPGSP
HHHHHHHHHEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCC
GHGCGLGLAIVSEIVQLHGARIDLEKSPQGGLRIRITFQALD
CCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]