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The map label for this gene is nosD [H]

Identifier: 71907199

GI number: 71907199

Start: 1679670

End: 1681028

Strand: Reverse

Name: nosD [H]

Synonym: Daro_1567

Alternate gene names: 71907199

Gene position: 1681028-1679670 (Counterclockwise)

Preceding gene: 71907200

Following gene: 71907198

Centisome position: 37.35

GC content: 56.22

Gene sequence:

>1359_bases
GTGAGTTCCCTGCACAATCTGGCCAGGCTCGGCCTGGCCACCGCACTCCTACTGGTTCTGAGCACTGGCAACACTGAACA
GCAATCTGAACTGCCTGCCGGCATGGGCGCCCGTGCCGATGTCGATCGCCCCAAGCCGACGTTCATGCTGCACGAACGTG
ATAAACGTGTACATGGCTTAAAGCCATTTCAAGATCTGGTTGACCGCGCCGAACCAGGCTCGGTACTCAAGCCCCCGCCG
GGCAACTATGCCGGCCCGGTCACCATCAACAAGCCGCTGACCATCGACGGTGGCGGCAAGGTGACGATCGATGCCGGTGA
CCGTGGCACGGTGATGATGCTCAACGCCAGCAACACGGTGGTGCGAGGCCTGCACCTGACGGGTTCCGGCGACTCGCATG
ACACCGATGACTCCTGTCTTGATGTTCGCGGTGACCACAACACCATCGAGAATATCGAGATGGACAACTGTTTGTTCGGC
CTCGACCTCAAACAGTCAAACAACAACCTGATTCGCGGCAACTCTATCCGCTCCAAGGACCGCGAACTTGGCGTCCGCGG
CGATGGCCTGCGTCTTTGGTACAGCAATGACAACACCATCGAGAAGAACCAGATCATCGACTCACGCGACATGGTGGCCT
GGTACTCGAACAAGAATGTTTTCCGCGACAACCTGGGAAAACGTAGCCGTTACTCCATCCATTTCATGTTCGCCAACGAC
AACGTCGTCGAGCGCAACGAGTTTTATGACAACGCAGTCGGTGTTTACTTCATGTACACCGAAGGCGGTGTTGTCCGCAA
TAATGTCATTTCCCACGCCACCGGCGCCACCGGCATGGGTATCGGCTTCAAGGAAGCCTCCGGCACGATCATCGAAAACA
ACGAGATCATCTATTGCGGCGTCGGCATCGGCTCCGACCTGTCCCCCTTCCAACCCGACAGCACCATCGAAATCCGTGGC
AATCGCTTCGCCTACAACGGTACCGGCATCCTGTTCAACAGCGAAACTGGCGGCAACAACATGGTCGACAATATCTTTGA
AGGCAACCTGACCCAGGTCGCCTACGGAGGTCATGGCGACAACAACAATAGCCCCAAGAACGTCTGGATCGGCAACTACT
GGGACGATTATCAAGGCTTCGATCGCAACGGAGACGGCTTCGGCGACAAAACCCATGAGCTGTATGCCTATGCTGATCAA
ATCTGGATGGAACTGCCGGTTGCTCGCTTTTTCCGCAGTTCGCCAGTCATGGAACTCCTCGATTTTCTTGAACGCCTGGC
CCCCTTCTCCACACCGGACCTGATCCTGCGCGATGAAAAACCGCGCTTTATCAAACCTGAAAGAACGGCACGATCATGA

Upstream 100 bases:

>100_bases
ACTGGGGCTATGGCCTGCTGGTGGCAATATTTGCTTGTATGATGCTAGCCCTGCTGATGCGCCGCAAACAACTGCGCGAA
GGCACTGCTGAGTAATCAGT

Downstream 100 bases:

>100_bases
GCGAGAACGAGAACAGCGGCGATGCGCCTCGGAAATCAGTATCCGATGCAACGCCAGCAGTGTCCATTGCCAAACGTCAA
ACCAACCGGCGCCGCGTGTT

Product: periplasmic copper-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MSSLHNLARLGLATALLLVLSTGNTEQQSELPAGMGARADVDRPKPTFMLHERDKRVHGLKPFQDLVDRAEPGSVLKPPP
GNYAGPVTINKPLTIDGGGKVTIDAGDRGTVMMLNASNTVVRGLHLTGSGDSHDTDDSCLDVRGDHNTIENIEMDNCLFG
LDLKQSNNNLIRGNSIRSKDRELGVRGDGLRLWYSNDNTIEKNQIIDSRDMVAWYSNKNVFRDNLGKRSRYSIHFMFAND
NVVERNEFYDNAVGVYFMYTEGGVVRNNVISHATGATGMGIGFKEASGTIIENNEIIYCGVGIGSDLSPFQPDSTIEIRG
NRFAYNGTGILFNSETGGNNMVDNIFEGNLTQVAYGGHGDNNNSPKNVWIGNYWDDYQGFDRNGDGFGDKTHELYAYADQ
IWMELPVARFFRSSPVMELLDFLERLAPFSTPDLILRDEKPRFIKPERTARS

Sequences:

>Translated_452_residues
MSSLHNLARLGLATALLLVLSTGNTEQQSELPAGMGARADVDRPKPTFMLHERDKRVHGLKPFQDLVDRAEPGSVLKPPP
GNYAGPVTINKPLTIDGGGKVTIDAGDRGTVMMLNASNTVVRGLHLTGSGDSHDTDDSCLDVRGDHNTIENIEMDNCLFG
LDLKQSNNNLIRGNSIRSKDRELGVRGDGLRLWYSNDNTIEKNQIIDSRDMVAWYSNKNVFRDNLGKRSRYSIHFMFAND
NVVERNEFYDNAVGVYFMYTEGGVVRNNVISHATGATGMGIGFKEASGTIIENNEIIYCGVGIGSDLSPFQPDSTIEIRG
NRFAYNGTGILFNSETGGNNMVDNIFEGNLTQVAYGGHGDNNNSPKNVWIGNYWDDYQGFDRNGDGFGDKTHELYAYADQ
IWMELPVARFFRSSPVMELLDFLERLAPFSTPDLILRDEKPRFIKPERTARS
>Mature_451_residues
SSLHNLARLGLATALLLVLSTGNTEQQSELPAGMGARADVDRPKPTFMLHERDKRVHGLKPFQDLVDRAEPGSVLKPPPG
NYAGPVTINKPLTIDGGGKVTIDAGDRGTVMMLNASNTVVRGLHLTGSGDSHDTDDSCLDVRGDHNTIENIEMDNCLFGL
DLKQSNNNLIRGNSIRSKDRELGVRGDGLRLWYSNDNTIEKNQIIDSRDMVAWYSNKNVFRDNLGKRSRYSIHFMFANDN
VVERNEFYDNAVGVYFMYTEGGVVRNNVISHATGATGMGIGFKEASGTIIENNEIIYCGVGIGSDLSPFQPDSTIEIRGN
RFAYNGTGILFNSETGGNNMVDNIFEGNLTQVAYGGHGDNNNSPKNVWIGNYWDDYQGFDRNGDGFGDKTHELYAYADQI
WMELPVARFFRSSPVMELLDFLERLAPFSTPDLILRDEKPRFIKPERTARS

Specific function: Involved in copper processing and transport; in the assembly of the copper chromophores of nitrous oxide reductase [H]

COG id: COG3420

COG function: function code P; Nitrous oxidase accessory protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006633
- InterPro:   IPR007742
- InterPro:   IPR022441
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF05048 NosD [H]

EC number: NA

Molecular weight: Translated: 50135; Mature: 50003

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLHNLARLGLATALLLVLSTGNTEQQSELPAGMGARADVDRPKPTFMLHERDKRVHGL
CCHHHHHHHHHHHHHHHHHEECCCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
KPFQDLVDRAEPGSVLKPPPGNYAGPVTINKPLTIDGGGKVTIDAGDRGTVMMLNASNTV
CHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCEEECCCCEEEEECCCCCEEEEEECCCEE
VRGLHLTGSGDSHDTDDSCLDVRGDHNTIENIEMDNCLFGLDLKQSNNNLIRGNSIRSKD
EEEEEEECCCCCCCCCCCEEEECCCCCCCCCEECCCEEEEEEEECCCCCEEECCCCCCHH
RELGVRGDGLRLWYSNDNTIEKNQIIDSRDMVAWYSNKNVFRDNLGKRSRYSIHFMFAND
HHCCCCCCCEEEEECCCCEECHHHCCCCCCEEEEECCCCCHHHCCCCCCEEEEEEEEECC
NVVERNEFYDNAVGVYFMYTEGGVVRNNVISHATGATGMGIGFKEASGTIIENNEIIYCG
CEEECCHHCCCCEEEEEEEECCCEEECCHHHCCCCCCCCCCEEECCCCEEEECCCEEEEE
VGIGSDLSPFQPDSTIEIRGNRFAYNGTGILFNSETGGNNMVDNIFEGNLTQVAYGGHGD
CCCCCCCCCCCCCCEEEECCCEEEECCCEEEEECCCCCCCHHHHHHCCCEEEEEECCCCC
NNNSPKNVWIGNYWDDYQGFDRNGDGFGDKTHELYAYADQIWMELPVARFFRSSPVMELL
CCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DFLERLAPFSTPDLILRDEKPRFIKPERTARS
HHHHHHCCCCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSLHNLARLGLATALLLVLSTGNTEQQSELPAGMGARADVDRPKPTFMLHERDKRVHGL
CHHHHHHHHHHHHHHHHHEECCCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
KPFQDLVDRAEPGSVLKPPPGNYAGPVTINKPLTIDGGGKVTIDAGDRGTVMMLNASNTV
CHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCEEECCCCEEEEECCCCCEEEEEECCCEE
VRGLHLTGSGDSHDTDDSCLDVRGDHNTIENIEMDNCLFGLDLKQSNNNLIRGNSIRSKD
EEEEEEECCCCCCCCCCCEEEECCCCCCCCCEECCCEEEEEEEECCCCCEEECCCCCCHH
RELGVRGDGLRLWYSNDNTIEKNQIIDSRDMVAWYSNKNVFRDNLGKRSRYSIHFMFAND
HHCCCCCCCEEEEECCCCEECHHHCCCCCCEEEEECCCCCHHHCCCCCCEEEEEEEEECC
NVVERNEFYDNAVGVYFMYTEGGVVRNNVISHATGATGMGIGFKEASGTIIENNEIIYCG
CEEECCHHCCCCEEEEEEEECCCEEECCHHHCCCCCCCCCCEEECCCCEEEECCCEEEEE
VGIGSDLSPFQPDSTIEIRGNRFAYNGTGILFNSETGGNNMVDNIFEGNLTQVAYGGHGD
CCCCCCCCCCCCCCEEEECCCEEEECCCEEEEECCCCCCCHHHHHHCCCEEEEEECCCCC
NNNSPKNVWIGNYWDDYQGFDRNGDGFGDKTHELYAYADQIWMELPVARFFRSSPVMELL
CCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DFLERLAPFSTPDLILRDEKPRFIKPERTARS
HHHHHHCCCCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]