Click here to switch to the map view.

The map label for this gene is 71907112

Identifier: 71907112

GI number: 71907112

Start: 1600523

End: 1600801

Strand: Reverse

Name: 71907112

Synonym: Daro_1480

Alternate gene names: NA

Gene position: 1600801-1600523 (Counterclockwise)

Preceding gene: 71907113

Following gene: 71907111

Centisome position: 35.56

GC content: 66.67

Gene sequence:

>279_bases
ATGCCGTCAGCCCTGACATGCCTCGCTAGGAACGCCTCGCACAGCAGTCTGAGCGGACTGCGTCGCCTGCTCGGCCTGTC
CCAGGCGGCGCTGGCCGGTCGGCTGGGCGTCTCCCAGCCGCACGTGGCCCAGCTCGAAAGCCAGGCAGACATGCACCTGG
GCACCCTGCGCCGCCACATTGCCGCCCTCGGCGGAGAACTCGAACTGGTCGTCCGCTTTCCCGACCAGCGCATCGAAATT
GTCTTGCCGGACAATAACACCCCACATCCCCCCCATTGA

Upstream 100 bases:

>100_bases
ACCTACGCCGAAGAAATGTCTGCCTGGCGCCTGCGCGACGAACGCTGGCTAATCTTCCGCACCATCACGACATCGACCTG
CAACGCCCCTCGAGGTTTCT

Downstream 100 bases:

>100_bases
CCGGCACCCCAGACAAAAATCGCTTCTAGCAGACCAATCATGGCCGGAAAAAACCACTTCGCTATCGCCGCCGTCGTCCC
CAACGAGACAACAAACAGCG

Product: helix-hairpin-helix DNA-binding motif-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MPSALTCLARNASHSSLSGLRRLLGLSQAALAGRLGVSQPHVAQLESQADMHLGTLRRHIAALGGELELVVRFPDQRIEI
VLPDNNTPHPPH

Sequences:

>Translated_92_residues
MPSALTCLARNASHSSLSGLRRLLGLSQAALAGRLGVSQPHVAQLESQADMHLGTLRRHIAALGGELELVVRFPDQRIEI
VLPDNNTPHPPH
>Mature_91_residues
PSALTCLARNASHSSLSGLRRLLGLSQAALAGRLGVSQPHVAQLESQADMHLGTLRRHIAALGGELELVVRFPDQRIEIV
LPDNNTPHPPH

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9884; Mature: 9752

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSALTCLARNASHSSLSGLRRLLGLSQAALAGRLGVSQPHVAQLESQADMHLGTLRRHI
CCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
AALGGELELVVRFPDQRIEIVLPDNNTPHPPH
HHCCCCEEEEEECCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure 
PSALTCLARNASHSSLSGLRRLLGLSQAALAGRLGVSQPHVAQLESQADMHLGTLRRHI
CCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
AALGGELELVVRFPDQRIEIVLPDNNTPHPPH
HHCCCCEEEEEECCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA