| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is modC2 [H]
Identifier: 71907111
GI number: 71907111
Start: 1599917
End: 1600483
Strand: Reverse
Name: modC2 [H]
Synonym: Daro_1479
Alternate gene names: 71907111
Gene position: 1600483-1599917 (Counterclockwise)
Preceding gene: 71907112
Following gene: 71907109
Centisome position: 35.56
GC content: 60.67
Gene sequence:
>567_bases ATGGCCGGAAAAAACCACTTCGCTATCGCCGCCGTCGTCCCCAACGAGACAACAAACAGCGATGAAACAGTCGCCGGGTT TGCCATCGCCCAGATCAACCGGGGATGGCGAATCAGAGGACTGATCCAGGAGGTCTACCAGACCCATCGCTCGAAACAAA TCCGGCTGGTCGCCCTGGACGACGGCAGCATCTACCCGATCAGCCAGTTTCTCGGCACCCACTCGGTATCGTGCCGTATC GATCTGTCCGGGATCGCCGAGGCCAGCGCCACCATGCGGCGCATCGCCATCAACGGTGCCGACCTGGCCATCTTCAACCG ATTTTCAACCCTGGAAGCGCACGGCCACGGATTTGCAGCCGAAATGCTCGATCTGATGAGCCGGCAGATTCCAGTACTGA CCATTGTTCCACCGAAACACCTGCCGGCCTGGCGACGATTCACCGGTCACCAGGCGGTTGAACTCCCCCCCGACCAGCGT TCTCTGCTGGCGTGGTTTGCCGACCTTTCAGCCCGCCGCTCCGGTTTCTGCCAGACCTCACCGGCATTTTCCGGAGCACG TGCATGA
Upstream 100 bases:
>100_bases TCCCGACCAGCGCATCGAAATTGTCTTGCCGGACAATAACACCCCACATCCCCCCCATTGACCGGCACCCCAGACAAAAA TCGCTTCTAGCAGACCAATC
Downstream 100 bases:
>100_bases TCCGACCCATCGACCGCTCTCGCGACCGGATTCCATTCGGAGCAGCCACCCGTCACCATCGAGCTACCCGAACAAACTCG TTTCCCAGATCCAGACCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MAGKNHFAIAAVVPNETTNSDETVAGFAIAQINRGWRIRGLIQEVYQTHRSKQIRLVALDDGSIYPISQFLGTHSVSCRI DLSGIAEASATMRRIAINGADLAIFNRFSTLEAHGHGFAAEMLDLMSRQIPVLTIVPPKHLPAWRRFTGHQAVELPPDQR SLLAWFADLSARRSGFCQTSPAFSGARA
Sequences:
>Translated_188_residues MAGKNHFAIAAVVPNETTNSDETVAGFAIAQINRGWRIRGLIQEVYQTHRSKQIRLVALDDGSIYPISQFLGTHSVSCRI DLSGIAEASATMRRIAINGADLAIFNRFSTLEAHGHGFAAEMLDLMSRQIPVLTIVPPKHLPAWRRFTGHQAVELPPDQR SLLAWFADLSARRSGFCQTSPAFSGARA >Mature_187_residues AGKNHFAIAAVVPNETTNSDETVAGFAIAQINRGWRIRGLIQEVYQTHRSKQIRLVALDDGSIYPISQFLGTHSVSCRID LSGIAEASATMRRIAINGADLAIFNRFSTLEAHGHGFAAEMLDLMSRQIPVLTIVPPKHLPAWRRFTGHQAVELPPDQRS LLAWFADLSARRSGFCQTSPAFSGARA
Specific function: Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015852 - InterPro: IPR003593 - InterPro: IPR018912 - InterPro: IPR008995 - InterPro: IPR011868 - InterPro: IPR005116 [H]
Pfam domain/function: PF00005 ABC_tran; PF10649 DUF2478; PF03459 TOBE [H]
EC number: =3.6.3.29 [H]
Molecular weight: Translated: 20609; Mature: 20478
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKNHFAIAAVVPNETTNSDETVAGFAIAQINRGWRIRGLIQEVYQTHRSKQIRLVALD CCCCCEEEEEEECCCCCCCCCCHHHHEEEEECCCCEEHHHHHHHHHHHCCCCEEEEEEEC DGSIYPISQFLGTHSVSCRIDLSGIAEASATMRRIAINGADLAIFNRFSTLEAHGHGFAA CCCEEEHHHHHCCCCEEEEEECCHHHHHHHHHHHEEECCCCEEEEEHHHHEECCCCCHHH EMLDLMSRQIPVLTIVPPKHLPAWRRFTGHQAVELPPDQRSLLAWFADLSARRSGFCQTS HHHHHHHCCCCEEEEECCCCCCHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCC PAFSGARA CCCCCCCC >Mature Secondary Structure AGKNHFAIAAVVPNETTNSDETVAGFAIAQINRGWRIRGLIQEVYQTHRSKQIRLVALD CCCCEEEEEEECCCCCCCCCCHHHHEEEEECCCCEEHHHHHHHHHHHCCCCEEEEEEEC DGSIYPISQFLGTHSVSCRIDLSGIAEASATMRRIAINGADLAIFNRFSTLEAHGHGFAA CCCEEEHHHHHCCCCEEEEEECCHHHHHHHHHHHEEECCCCEEEEEHHHHEECCCCCHHH EMLDLMSRQIPVLTIVPPKHLPAWRRFTGHQAVELPPDQRSLLAWFADLSARRSGFCQTS HHHHHHHCCCCEEEEECCCCCCHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCC PAFSGARA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]