Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71907094

Identifier: 71907094

GI number: 71907094

Start: 1587233

End: 1588279

Strand: Reverse

Name: 71907094

Synonym: Daro_1462

Alternate gene names: NA

Gene position: 1588279-1587233 (Counterclockwise)

Preceding gene: 71907095

Following gene: 71907093

Centisome position: 35.29

GC content: 69.15

Gene sequence:

>1047_bases
ATGCGCCTCTACCGCGCCCTGCTGATCGCTGCCGCCCTGCTCGCCCTGATCGTCATCGGCTTGGGCGCCTACGTCCGGCT
GTCCGATGCCGGCCTCGGCTGCCCCGACTGGCCGGGTTGTTACGGCCACTGGCTGGGCGTTCCCGAAAGCGGGCATGAAC
ATCTGGCCGCCCAGGCCAATTTCCCGCATCAACCGGTGGATACGGGCAAGGCCTGGAAGGAAATGGTCCATCGCTATTTC
GCCGGCACGCTGGGCCTGCTCATCCTGGCCATCTGCTGGCTCGCCTGGCGCCCCGCCCTGCGCTGCCGGCGGTCGCCCCT
CCTGCCTACCATCCTGCTCGGTCTCGTCGGCCTGCAGGCCGCCCTCGGCATGTGGACCGTCACGCTGCTGCTCAAGCCGG
TGATCGTCACCCTGCACCTGCTCGGCGGCATGAGCACGCTGGCCCTGCTGGTCGTCCTCAATTGGCGTGAGCGACAGGCC
TCCCTGCCGCGCGCTGCCGGCCCGACGCTGCGCCTGGCAGCCCGCCTCGCGCTGCTTGCCGTGATCGGCCAGATTGCATT
GGGCGGCTGGGTCAGCAGCAACTACGCCGGTCTCGCCTGCCCCGACTTGCCGCGCTGCCAGGGCCTATGGCAACCGTCCA
TGGACTTCGGCCATGCCTTCACCGTCGTCCGCGACCTGGGTTACAACGCCCACGGCCAGCTCCTGAGCACCGAGGCGCTG
ACCACCATCCACTGGGTTCATCGCCTGGGTGCCATCCTTGTCGCCGGAACCGTCCTTGCCCTGGCCATCGCCCTCGGCAC
CGGCAGCGACCGGGAACAACGACGCTGGGCCGGCGCACTGCTCGCCATGCTCGGCCTGCAAATCGCCCTTGGCATCGGCA
ATGTGCTGCTCTCGCTCCCGCTGCCCATGGCCGTGGCCCACACGCTCGGTGCGGCCGGCTTGTTCAGCGTACTGCTGACC
ATCAACCTGCGACTTCCGGCCATCGATCCCGTCGCCGAGCGCTCCCGGCACGCCTGCCCGGAACCTGGTCTGCACACCCC
CGCCTAA

Upstream 100 bases:

>100_bases
CGATGCCTTGGCCCGGCGTACCTTCCGCTATTCCATCCTCTACCTGACCCTGCTCTTCGCGGCGCTGTTCGCCGACCGGC
TGATCGTCCTCTAGGCCGCC

Downstream 100 bases:

>100_bases
TGCGTGGTCTGCCAATTCAGGGCGCTATACTGGAAGACATGAACGGCATCGCATGGACCGGTATGCGCCGGGTGCCAAAC
GTGACTGAAGGACGATGCCT

Product: cytochrome oxidase assembly

Products: NA

Alternate protein names: Cytochrome Oxidase Assembly Protein; Cytochrome C Oxidase Assembly Protein; Cytochrome Oxidase Assembly Family Protein/ Protein FtsY; Protein Required For Cytochrome Oxidase Assembly; Cytochrome Aa3 Oxidase Assembly Protein; Cytochrome Aa3 Oxidase Assembly Protein Related CtaA; Heme O Oxygenase Transmembrane Protein; Heme A Synthase Cytochrome Oxidase Biogenesis -CtaA; Cytochrome Oxidase Assembly Family Protein; Cytochrome C Oxidase Subunit XV Assembly Protein; Heme O Monooxygenase; Heme O Oxygenase; HemeA Synthase

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MRLYRALLIAAALLALIVIGLGAYVRLSDAGLGCPDWPGCYGHWLGVPESGHEHLAAQANFPHQPVDTGKAWKEMVHRYF
AGTLGLLILAICWLAWRPALRCRRSPLLPTILLGLVGLQAALGMWTVTLLLKPVIVTLHLLGGMSTLALLVVLNWRERQA
SLPRAAGPTLRLAARLALLAVIGQIALGGWVSSNYAGLACPDLPRCQGLWQPSMDFGHAFTVVRDLGYNAHGQLLSTEAL
TTIHWVHRLGAILVAGTVLALAIALGTGSDREQRRWAGALLAMLGLQIALGIGNVLLSLPLPMAVAHTLGAAGLFSVLLT
INLRLPAIDPVAERSRHACPEPGLHTPA

Sequences:

>Translated_348_residues
MRLYRALLIAAALLALIVIGLGAYVRLSDAGLGCPDWPGCYGHWLGVPESGHEHLAAQANFPHQPVDTGKAWKEMVHRYF
AGTLGLLILAICWLAWRPALRCRRSPLLPTILLGLVGLQAALGMWTVTLLLKPVIVTLHLLGGMSTLALLVVLNWRERQA
SLPRAAGPTLRLAARLALLAVIGQIALGGWVSSNYAGLACPDLPRCQGLWQPSMDFGHAFTVVRDLGYNAHGQLLSTEAL
TTIHWVHRLGAILVAGTVLALAIALGTGSDREQRRWAGALLAMLGLQIALGIGNVLLSLPLPMAVAHTLGAAGLFSVLLT
INLRLPAIDPVAERSRHACPEPGLHTPA
>Mature_348_residues
MRLYRALLIAAALLALIVIGLGAYVRLSDAGLGCPDWPGCYGHWLGVPESGHEHLAAQANFPHQPVDTGKAWKEMVHRYF
AGTLGLLILAICWLAWRPALRCRRSPLLPTILLGLVGLQAALGMWTVTLLLKPVIVTLHLLGGMSTLALLVVLNWRERQA
SLPRAAGPTLRLAARLALLAVIGQIALGGWVSSNYAGLACPDLPRCQGLWQPSMDFGHAFTVVRDLGYNAHGQLLSTEAL
TTIHWVHRLGAILVAGTVLALAIALGTGSDREQRRWAGALLAMLGLQIALGIGNVLLSLPLPMAVAHTLGAAGLFSVLLT
INLRLPAIDPVAERSRHACPEPGLHTPA

Specific function: Unknown

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37101; Mature: 37101

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLYRALLIAAALLALIVIGLGAYVRLSDAGLGCPDWPGCYGHWLGVPESGHEHLAAQAN
CHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCC
FPHQPVDTGKAWKEMVHRYFAGTLGLLILAICWLAWRPALRCRRSPLLPTILLGLVGLQA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ALGMWTVTLLLKPVIVTLHLLGGMSTLALLVVLNWRERQASLPRAAGPTLRLAARLALLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHH
VIGQIALGGWVSSNYAGLACPDLPRCQGLWQPSMDFGHAFTVVRDLGYNAHGQLLSTEAL
HHHHHHHCCHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH
TTIHWVHRLGAILVAGTVLALAIALGTGSDREQRRWAGALLAMLGLQIALGIGNVLLSLP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPMAVAHTLGAAGLFSVLLTINLRLPAIDPVAERSRHACPEPGLHTPA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRLYRALLIAAALLALIVIGLGAYVRLSDAGLGCPDWPGCYGHWLGVPESGHEHLAAQAN
CHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCC
FPHQPVDTGKAWKEMVHRYFAGTLGLLILAICWLAWRPALRCRRSPLLPTILLGLVGLQA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ALGMWTVTLLLKPVIVTLHLLGGMSTLALLVVLNWRERQASLPRAAGPTLRLAARLALLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHH
VIGQIALGGWVSSNYAGLACPDLPRCQGLWQPSMDFGHAFTVVRDLGYNAHGQLLSTEAL
HHHHHHHCCHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH
TTIHWVHRLGAILVAGTVLALAIALGTGSDREQRRWAGALLAMLGLQIALGIGNVLLSLP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPMAVAHTLGAAGLFSVLLTINLRLPAIDPVAERSRHACPEPGLHTPA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA