| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is nifQ [H]
Identifier: 71907080
GI number: 71907080
Start: 1577955
End: 1578527
Strand: Reverse
Name: nifQ [H]
Synonym: Daro_1448
Alternate gene names: 71907080
Gene position: 1578527-1577955 (Counterclockwise)
Preceding gene: 71907081
Following gene: 71907079
Centisome position: 35.07
GC content: 62.65
Gene sequence:
>573_bases ATGAACGGTCCGGATCGTCTGCCCCTGCGGCCATTGCTGCTGGCCGACCTACTGGCTTCGCCGGCAATCGGGCCGGCGGC GTTCGATCCGAACCGTCCCTTGCTGGCCAGCCTGATTGCCGGCCAGACCAGTGGAGGCGGCTGCCTGCCGCCGCACCTTG GCCTCGGCCCGGCTGCCTATCGCTATCTGCGCGAAGCCTATTTTCCCGGCTGCACGGCAACGCCGACCGCCCGGGAAATC GAATCAATCCCCGAATGGGACGATCTGCAAAAGCTGCTGCTCGACCACCGCGCCCGCAAATCGCCCAGCGAACTGCTGAT GGCCAATATCGTCGCCACCGCCTGTATCGGCCGCGACCATCTCTGGCAGGACCTTGGCCTCGCCAGTCGTGACGAACTCA GCCAGCTGATGTGGGTGAATTTTCCCGAACTTGCCCGCGCCAACACCGGCGACATGAAGTGGAAGAAATTCCTCTACCGT CAGTTCTGCTCGCGTGAAGGCATTTATGTCTGCCCCGCCCCGTCCTGCGGGGTTTGCAAGGATTACGCCAAATGTTTTGG TCCGGAGAACTGA
Upstream 100 bases:
>100_bases GTCGACGACATCCCGCCGACCCAGTGGCGCCTCGCCTGCCAGATGATCGTCCGCGACGAGGACATCCTGGTCGAATATCC GAGCAAATAAGGCAAAAGAC
Downstream 100 bases:
>100_bases TCGCCAGAACCGCGCCGGTACGCCGCCGCGCCGCCCCCTATCCGGCGCGCTCGGCGCTGCTCGACCGGGGCGTTGCCGCC TATAGCGGACTGGCGATTGG
Product: NifQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MNGPDRLPLRPLLLADLLASPAIGPAAFDPNRPLLASLIAGQTSGGGCLPPHLGLGPAAYRYLREAYFPGCTATPTAREI ESIPEWDDLQKLLLDHRARKSPSELLMANIVATACIGRDHLWQDLGLASRDELSQLMWVNFPELARANTGDMKWKKFLYR QFCSREGIYVCPAPSCGVCKDYAKCFGPEN
Sequences:
>Translated_190_residues MNGPDRLPLRPLLLADLLASPAIGPAAFDPNRPLLASLIAGQTSGGGCLPPHLGLGPAAYRYLREAYFPGCTATPTAREI ESIPEWDDLQKLLLDHRARKSPSELLMANIVATACIGRDHLWQDLGLASRDELSQLMWVNFPELARANTGDMKWKKFLYR QFCSREGIYVCPAPSCGVCKDYAKCFGPEN >Mature_190_residues MNGPDRLPLRPLLLADLLASPAIGPAAFDPNRPLLASLIAGQTSGGGCLPPHLGLGPAAYRYLREAYFPGCTATPTAREI ESIPEWDDLQKLLLDHRARKSPSELLMANIVATACIGRDHLWQDLGLASRDELSQLMWVNFPELARANTGDMKWKKFLYR QFCSREGIYVCPAPSCGVCKDYAKCFGPEN
Specific function: Probably involved in molybdenum processing [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nifQ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006975 [H]
Pfam domain/function: PF04891 NifQ [H]
EC number: NA
Molecular weight: Translated: 20885; Mature: 20885
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGPDRLPLRPLLLADLLASPAIGPAAFDPNRPLLASLIAGQTSGGGCLPPHLGLGPAAY CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHH RYLREAYFPGCTATPTAREIESIPEWDDLQKLLLDHRARKSPSELLMANIVATACIGRDH HHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHH LWQDLGLASRDELSQLMWVNFPELARANTGDMKWKKFLYRQFCSREGIYVCPAPSCGVCK HHHHHCCCCHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHH DYAKCFGPEN HHHHHCCCCC >Mature Secondary Structure MNGPDRLPLRPLLLADLLASPAIGPAAFDPNRPLLASLIAGQTSGGGCLPPHLGLGPAAY CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHH RYLREAYFPGCTATPTAREIESIPEWDDLQKLLLDHRARKSPSELLMANIVATACIGRDH HHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHH LWQDLGLASRDELSQLMWVNFPELARANTGDMKWKKFLYRQFCSREGIYVCPAPSCGVCK HHHHHCCCCHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHH DYAKCFGPEN HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2450865 [H]