| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906979
Identifier: 71906979
GI number: 71906979
Start: 1463473
End: 1464003
Strand: Reverse
Name: 71906979
Synonym: Daro_1347
Alternate gene names: NA
Gene position: 1464003-1463473 (Counterclockwise)
Preceding gene: 71906980
Following gene: 71906975
Centisome position: 32.53
GC content: 54.24
Gene sequence:
>531_bases ATGACACGACGTATCGTTACCGGAGAGAAGAATGGCCGTTCCGTTTTTCTGTCCGATGGACCTATTCCCAATTCCCATGA CTATCAATCAGTCCCGGGCTTCCACACCGCCTTGGCTTGGGCTACGCCGGCAGAACCTAGGCTTCCCTACGATGGGAATG ATCCGACCATCGCAATCAAGTCGGTTGTCCCCGCGCCAGATGGAACACGCATGATCATCGTCCAGTTTCCACCGGACAGC GTATTCGAATCGGAAGCATTTAACCCGGAAGGCGCTGGTCAGGAATATGCGACGTACCTGCCGGGCCTGGCTGAAAGCTT CGACAGCGACGGTTCTGGCATGCACCAGACCAAGTCCGTCGATTACGACATTATCGTTAGCGGTGAGCTTTGGCTAGAAC TCGATGACGGCGAGGTTCGGCACCTTAAGGCCGGGGATATTGTTATACAAAACGGCACACGACACGCTTGGCGCAACAAA AGCGATAAACCAGCAAACATGATTGCTGTTCTGATCGGCGCCAAACGCTGA
Upstream 100 bases:
>100_bases TGATCACCCAAGAATAAGGCCCCTGCCTTCATCAATCGCAGCCTTGCTCCTGAGCACACAGCACCACATTGCAATTTATC GATAATCCAATGAGAAAACT
Downstream 100 bases:
>100_bases TCACTCCGCACCTGTGAAAAAATGGCCGTACTACGTTGCGTAGACGGCCATTTTCACACTTGAATCGAGAAAAGGCAGCC GAGAAAGATTCTTCCTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin Superfamily Protein; Cupin 2 Barrel; Transcriptional Regulator Protein; Cupin Domain-Containing Protein
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTRRIVTGEKNGRSVFLSDGPIPNSHDYQSVPGFHTALAWATPAEPRLPYDGNDPTIAIKSVVPAPDGTRMIIVQFPPDS VFESEAFNPEGAGQEYATYLPGLAESFDSDGSGMHQTKSVDYDIIVSGELWLELDDGEVRHLKAGDIVIQNGTRHAWRNK SDKPANMIAVLIGAKR
Sequences:
>Translated_176_residues MTRRIVTGEKNGRSVFLSDGPIPNSHDYQSVPGFHTALAWATPAEPRLPYDGNDPTIAIKSVVPAPDGTRMIIVQFPPDS VFESEAFNPEGAGQEYATYLPGLAESFDSDGSGMHQTKSVDYDIIVSGELWLELDDGEVRHLKAGDIVIQNGTRHAWRNK SDKPANMIAVLIGAKR >Mature_175_residues TRRIVTGEKNGRSVFLSDGPIPNSHDYQSVPGFHTALAWATPAEPRLPYDGNDPTIAIKSVVPAPDGTRMIIVQFPPDSV FESEAFNPEGAGQEYATYLPGLAESFDSDGSGMHQTKSVDYDIIVSGELWLELDDGEVRHLKAGDIVIQNGTRHAWRNKS DKPANMIAVLIGAKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19191; Mature: 19059
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRIVTGEKNGRSVFLSDGPIPNSHDYQSVPGFHTALAWATPAEPRLPYDGNDPTIAIK CCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCCCCEEEEE SVVPAPDGTRMIIVQFPPDSVFESEAFNPEGAGQEYATYLPGLAESFDSDGSGMHQTKSV EEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHCCCCCCCCCCCCCC DYDIIVSGELWLELDDGEVRHLKAGDIVIQNGTRHAWRNKSDKPANMIAVLIGAKR CEEEEECCEEEEEECCCCEEEEECCCEEEECCCCHHHCCCCCCCCEEEEEEEECCC >Mature Secondary Structure TRRIVTGEKNGRSVFLSDGPIPNSHDYQSVPGFHTALAWATPAEPRLPYDGNDPTIAIK CCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCCCCEEEEE SVVPAPDGTRMIIVQFPPDSVFESEAFNPEGAGQEYATYLPGLAESFDSDGSGMHQTKSV EEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHCCCCCCCCCCCCCC DYDIIVSGELWLELDDGEVRHLKAGDIVIQNGTRHAWRNKSDKPANMIAVLIGAKR CEEEEECCEEEEEECCCCEEEEECCCEEEECCCCHHHCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA