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The map label for this gene is 71906945

Identifier: 71906945

GI number: 71906945

Start: 1425720

End: 1426541

Strand: Reverse

Name: 71906945

Synonym: Daro_1311

Alternate gene names: NA

Gene position: 1426541-1425720 (Counterclockwise)

Preceding gene: 71906946

Following gene: 71906944

Centisome position: 31.69

GC content: 52.68

Gene sequence:

>822_bases
ATGAAAAATCGGGTTCAACAGTTTCGAAAGGCGCTCAAGCTATCGCAGCGGCAACTTGCTGAGGCAGTGGGAACAAGCCA
GCAGCAGATTCAACGGATCGAATCCGGCCAAATCGCAGCCAAACTAGAAATGGCGGCGAAGCTCTGCGCTGCCTTGCAGA
AGCCAATGGAGGTCGTATTTCCGGGGGCAACCAAAGCACTGAAGTCTGCTGAAAGGGAAATGAACGCCTCGCATACGTTT
CCTGATGAGGCATGGCAGAAGCTACGAGAATCGGGAATCGAAGGTGATCCGCGTGAATGGACCTTCAAGGTTCTGCTCAA
AGGCCATAACGCACCCATGTTGTTCAGAATATCGTCTACTGAGCAGTCGCGGCTGTATGGTCTGATTCAAGAGGAAAACA
GCGATTCCGAGTCTGCATCATTCGTGGTCTTCGACACGGAAGATCGTCGCTGGGCACTGAACCTAGCCGAGTTGGACTTC
TGTCACTTCTTGTTCGACGTCTCTCCTGCTGGTGCGGTCAGGGATGAGTCGGACTCCAAAGAAACTGAAGAGGAGGCATG
TAGCGTCCTTCTCCATTTCATCGGGGGCGGATCTCCTATGGCTCTAGAGGTTGATGTAGACGAGCCAGACGACATGGACG
ACACAGGGCAATGTGGACACGTCCTCTACATGCTCGAAATGGCGCCACAGCAATCCGACCGTTATCGAATTATCGATAGC
GATGGAGAGCACGCGTTTATCCGCGCCGGATCGATTGCTCTTTTGTCCGTTCCACTTGCTGTATTGGAGCCACTAGATCG
CGATGAGGATGAGGATGAGTAA

Upstream 100 bases:

>100_bases
CAATCGACTAGCTGCTCCTTTCATTCAAGAAAATGTGTATTGACACGGTTTTGCGTTTAGCGCAAAGTGTTGTTACACGG
TTAAGTGTTTTTGAGGCGAG

Downstream 100 bases:

>100_bases
TCGAAGCTGGATTGACGAGCATTCCAAGGGCTGGCCGAAATGGTCCGATGTGTATGAGTTGTGGGAAAAGGCCAATGTCC
CTGAAGTAAAGGAAGTCCCA

Product: helix-hairpin-helix DNA-binding motif-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKNRVQQFRKALKLSQRQLAEAVGTSQQQIQRIESGQIAAKLEMAAKLCAALQKPMEVVFPGATKALKSAEREMNASHTF
PDEAWQKLRESGIEGDPREWTFKVLLKGHNAPMLFRISSTEQSRLYGLIQEENSDSESASFVVFDTEDRRWALNLAELDF
CHFLFDVSPAGAVRDESDSKETEEEACSVLLHFIGGGSPMALEVDVDEPDDMDDTGQCGHVLYMLEMAPQQSDRYRIIDS
DGEHAFIRAGSIALLSVPLAVLEPLDRDEDEDE

Sequences:

>Translated_273_residues
MKNRVQQFRKALKLSQRQLAEAVGTSQQQIQRIESGQIAAKLEMAAKLCAALQKPMEVVFPGATKALKSAEREMNASHTF
PDEAWQKLRESGIEGDPREWTFKVLLKGHNAPMLFRISSTEQSRLYGLIQEENSDSESASFVVFDTEDRRWALNLAELDF
CHFLFDVSPAGAVRDESDSKETEEEACSVLLHFIGGGSPMALEVDVDEPDDMDDTGQCGHVLYMLEMAPQQSDRYRIIDS
DGEHAFIRAGSIALLSVPLAVLEPLDRDEDEDE
>Mature_273_residues
MKNRVQQFRKALKLSQRQLAEAVGTSQQQIQRIESGQIAAKLEMAAKLCAALQKPMEVVFPGATKALKSAEREMNASHTF
PDEAWQKLRESGIEGDPREWTFKVLLKGHNAPMLFRISSTEQSRLYGLIQEENSDSESASFVVFDTEDRRWALNLAELDF
CHFLFDVSPAGAVRDESDSKETEEEACSVLLHFIGGGSPMALEVDVDEPDDMDDTGQCGHVLYMLEMAPQQSDRYRIIDS
DGEHAFIRAGSIALLSVPLAVLEPLDRDEDEDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30538; Mature: 30538

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRVQQFRKALKLSQRQLAEAVGTSQQQIQRIESGQIAAKLEMAAKLCAALQKPMEVVF
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEC
PGATKALKSAEREMNASHTFPDEAWQKLRESGIEGDPREWTFKVLLKGHNAPMLFRISST
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEECCC
EQSRLYGLIQEENSDSESASFVVFDTEDRRWALNLAELDFCHFLFDVSPAGAVRDESDSK
CCCHHEEEEECCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCH
ETEEEACSVLLHFIGGGSPMALEVDVDEPDDMDDTGQCGHVLYMLEMAPQQSDRYRIIDS
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEC
DGEHAFIRAGSIALLSVPLAVLEPLDRDEDEDE
CCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKNRVQQFRKALKLSQRQLAEAVGTSQQQIQRIESGQIAAKLEMAAKLCAALQKPMEVVF
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEC
PGATKALKSAEREMNASHTFPDEAWQKLRESGIEGDPREWTFKVLLKGHNAPMLFRISST
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEECCC
EQSRLYGLIQEENSDSESASFVVFDTEDRRWALNLAELDFCHFLFDVSPAGAVRDESDSK
CCCHHEEEEECCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCH
ETEEEACSVLLHFIGGGSPMALEVDVDEPDDMDDTGQCGHVLYMLEMAPQQSDRYRIIDS
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEC
DGEHAFIRAGSIALLSVPLAVLEPLDRDEDEDE
CCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA