Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is ate

Identifier: 71906834

GI number: 71906834

Start: 1299163

End: 1299906

Strand: Reverse

Name: ate

Synonym: Daro_1195

Alternate gene names: 71906834

Gene position: 1299906-1299163 (Counterclockwise)

Preceding gene: 71906835

Following gene: 71906833

Centisome position: 28.88

GC content: 59.41

Gene sequence:

>744_bases
ATGGCCCAACCCGACGACGCCGCCCTCCCCTTTTCGCTGCTGCAGTTCTACGCCACTTCGCCCTATCCGTGCAGCTATCT
GCCCGACCGCGAGGCCCGTTCGCAAGTGGCAACCCCGGCTCACCTGATCGACAGCGAAATCTACAGTTCGCTGATCCGTA
CTGGTTTTCGGCGCAGCGGCATCTTTACCTATCGCCCTCACTGTGACGGCTGCAAGGCCTGCGTTCCGGTTCGCCTGCCG
GTGACCGAGTTGCGCCCCAATCGCAGCCAGCGCCGCGCCATGAAGCACCATGCCAAGCTGCGCGTCCGCGAATTGCCCTT
GGTCTATATCGACGAGCATTACGCGCTGTACAACCGCTACCAGCAAGCTCGGCATCCCGGTGGCGGCATGGACGAAGACA
GTCATGAGCAATATGCCCAGTTCCTGCTGCAAAGTCGTGTAGACACCCGGCTGATCGAGTTCTCCGACGATGAAGGCATC
CGTATGGTCAGCCTGATCGATGTCCTCGACGACGGTCTCTCCTCGGTCTATACCTTCTACGACCCGGACATTCCAGACGC
CAGCTTTGGCACCTACAACATCCTGTGGCAAGCTGCCCAATGTCAGGCCCTCGGCCTGCCCTACCTTTACCTCGGCTACT
GGATCGCCAATAGTCGCAAGATGGCCTACAAGGCGATGTTTCAGCCCATTGAAGGCCTGATCGATGGCCACTGGCTCGCG
CTACCCAAACTCGAAAAAACATGA

Upstream 100 bases:

>100_bases
TTCCGCGAGATGCGTTTCAGGCCCGCTTGTCAGCCTTGACCGCATCCGGCAGTCCACGCACAGTCTGGTCGACCGACCCG
CTTGACCCGGCGAGATAGAC

Downstream 100 bases:

>100_bases
AACTCAGTTACCTCTTGGCACTACTCCTCCCGCTGTGCGCAATAGCCAGCGAAGAACGCACTCCCTACGCCTGCGACAAC
GGCAGCCGCCTCGACATTTC

Product: arginyl-tRNA-protein transferase

Products: NA

Alternate protein names: Arginyltransferase; R-transferase

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MAQPDDAALPFSLLQFYATSPYPCSYLPDREARSQVATPAHLIDSEIYSSLIRTGFRRSGIFTYRPHCDGCKACVPVRLP
VTELRPNRSQRRAMKHHAKLRVRELPLVYIDEHYALYNRYQQARHPGGGMDEDSHEQYAQFLLQSRVDTRLIEFSDDEGI
RMVSLIDVLDDGLSSVYTFYDPDIPDASFGTYNILWQAAQCQALGLPYLYLGYWIANSRKMAYKAMFQPIEGLIDGHWLA
LPKLEKT

Sequences:

>Translated_247_residues
MAQPDDAALPFSLLQFYATSPYPCSYLPDREARSQVATPAHLIDSEIYSSLIRTGFRRSGIFTYRPHCDGCKACVPVRLP
VTELRPNRSQRRAMKHHAKLRVRELPLVYIDEHYALYNRYQQARHPGGGMDEDSHEQYAQFLLQSRVDTRLIEFSDDEGI
RMVSLIDVLDDGLSSVYTFYDPDIPDASFGTYNILWQAAQCQALGLPYLYLGYWIANSRKMAYKAMFQPIEGLIDGHWLA
LPKLEKT
>Mature_246_residues
AQPDDAALPFSLLQFYATSPYPCSYLPDREARSQVATPAHLIDSEIYSSLIRTGFRRSGIFTYRPHCDGCKACVPVRLPV
TELRPNRSQRRAMKHHAKLRVRELPLVYIDEHYALYNRYQQARHPGGGMDEDSHEQYAQFLLQSRVDTRLIEFSDDEGIR
MVSLIDVLDDGLSSVYTFYDPDIPDASFGTYNILWQAAQCQALGLPYLYLGYWIANSRKMAYKAMFQPIEGLIDGHWLAL
PKLEKT

Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential)

COG id: COG2935

COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the R-transferase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATE_DECAR (Q47GT0)

Other databases:

- EMBL:   CP000089
- RefSeq:   YP_284421.1
- STRING:   Q47GT0
- GeneID:   3570136
- GenomeReviews:   CP000089_GR
- KEGG:   dar:Daro_1195
- NMPDR:   fig|159087.4.peg.825
- eggNOG:   COG2935
- HOGENOM:   HBG651116
- OMA:   PQFYLTA
- ProtClustDB:   PRK01305
- BioCyc:   DARO159087:DARO_1195-MONOMER
- GO:   GO:0005737
- GO:   GO:0006412
- HAMAP:   MF_00689
- InterPro:   IPR016181
- InterPro:   IPR007472
- InterPro:   IPR017138
- InterPro:   IPR007471
- PIRSF:   PIRSF037208

Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N; SSF55729 Acyl_CoA_acyltransferase

EC number: =2.3.2.8

Molecular weight: Translated: 28348; Mature: 28216

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQPDDAALPFSLLQFYATSPYPCSYLPDREARSQVATPAHLIDSEIYSSLIRTGFRRSG
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCHHHCC
IFTYRPHCDGCKACVPVRLPVTELRPNRSQRRAMKHHAKLRVRELPLVYIDEHYALYNRY
EEEECCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHH
QQARHPGGGMDEDSHEQYAQFLLQSRVDTRLIEFSDDEGIRMVSLIDVLDDGLSSVYTFY
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHEEEEE
DPDIPDASFGTYNILWQAAQCQALGLPYLYLGYWIANSRKMAYKAMFQPIEGLIDGHWLA
CCCCCCCCCCHHHHEEEHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEE
LPKLEKT
CCCCCCC
>Mature Secondary Structure 
AQPDDAALPFSLLQFYATSPYPCSYLPDREARSQVATPAHLIDSEIYSSLIRTGFRRSG
CCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCHHHCC
IFTYRPHCDGCKACVPVRLPVTELRPNRSQRRAMKHHAKLRVRELPLVYIDEHYALYNRY
EEEECCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHH
QQARHPGGGMDEDSHEQYAQFLLQSRVDTRLIEFSDDEGIRMVSLIDVLDDGLSSVYTFY
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHEEEEE
DPDIPDASFGTYNILWQAAQCQALGLPYLYLGYWIANSRKMAYKAMFQPIEGLIDGHWLA
CCCCCCCCCCHHHHEEEHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEE
LPKLEKT
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA