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The map label for this gene is lemA [H]

Identifier: 71906829

GI number: 71906829

Start: 1295743

End: 1296348

Strand: Reverse

Name: lemA [H]

Synonym: Daro_1190

Alternate gene names: 71906829

Gene position: 1296348-1295743 (Counterclockwise)

Preceding gene: 71906830

Following gene: 71906828

Centisome position: 28.8

GC content: 60.56

Gene sequence:

>606_bases
ATGCGCATTCGTCTCTACTCCGTCCTTCTCGTCGTCGCCAGCCTGCTTTCCGGCTGCGGTTACAACCAGATCCAGATCAA
CGACGAAGGTGTCAACGCCGCGTGGTCCGAGGTGCTCAACCAATACAAACGCCGGGCAGATCTGATCCCCAACCTGGTTT
CCGTCGTTCAGGGCTATGCCGCCCATGAAAAGGAAGTGCTGACCCGCGTCACCGAGGCCCGCGCCAACGTCGCCGGCATG
AAGATCACGCCGGAACTGGTCAATGACGAAGCGGCTTTCGCCAAGTTCCAGAAGGCGCAAGGCGAACTCTCCGGCGCGCT
GTCCCGCCTGCTGGTCGTTGCAGAGAACTACCCGAACCTCAAGGCCGACGCCAATTTCCGCGACCTGCAGGCCCAGCTCG
AAGGCACCGAGAACCGCATCACCGTGGCCCGCAACCGCTACATCGATACGGTGCGCGTCTATAACATTTCGGTGCGCACC
TTCCCGAACAACCTGACAGCGATGGTCATGGGCTACAAGCCCAAGGCCAATTTCACGGTCGAGGACGAGAAGGCCATTTC
GACGCCGCCGGTTGTCAAGTTCGACACCCCGGCTACCGCCAAGTAA

Upstream 100 bases:

>100_bases
TGGTGGGCTGTAGAAGTCGTCAGGCCCGACCAAACTTTATCCGACCGGAAATATCACGATGGTATGCTTGGCAGCGAACC
ATTTTTCGGGAGCCACTTTC

Downstream 100 bases:

>100_bases
GTCTTGATGCTCCACTGGCTCGCCGCTCTCTGGCTCGCGCTGCTGCCACTGTCCGGCTGGAGCGCCAACGAGGTGGCGCT
GCCGGTGCTGACCGAGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MRIRLYSVLLVVASLLSGCGYNQIQINDEGVNAAWSEVLNQYKRRADLIPNLVSVVQGYAAHEKEVLTRVTEARANVAGM
KITPELVNDEAAFAKFQKAQGELSGALSRLLVVAENYPNLKADANFRDLQAQLEGTENRITVARNRYIDTVRVYNISVRT
FPNNLTAMVMGYKPKANFTVEDEKAISTPPVVKFDTPATAK

Sequences:

>Translated_201_residues
MRIRLYSVLLVVASLLSGCGYNQIQINDEGVNAAWSEVLNQYKRRADLIPNLVSVVQGYAAHEKEVLTRVTEARANVAGM
KITPELVNDEAAFAKFQKAQGELSGALSRLLVVAENYPNLKADANFRDLQAQLEGTENRITVARNRYIDTVRVYNISVRT
FPNNLTAMVMGYKPKANFTVEDEKAISTPPVVKFDTPATAK
>Mature_201_residues
MRIRLYSVLLVVASLLSGCGYNQIQINDEGVNAAWSEVLNQYKRRADLIPNLVSVVQGYAAHEKEVLTRVTEARANVAGM
KITPELVNDEAAFAKFQKAQGELSGALSRLLVVAENYPNLKADANFRDLQAQLEGTENRITVARNRYIDTVRVYNISVRT
FPNNLTAMVMGYKPKANFTVEDEKAISTPPVVKFDTPATAK

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 22278; Mature: 22278

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRLYSVLLVVASLLSGCGYNQIQINDEGVNAAWSEVLNQYKRRADLIPNLVSVVQGYA
CEEHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHEKEVLTRVTEARANVAGMKITPELVNDEAAFAKFQKAQGELSGALSRLLVVAENYPNL
HHHHHHHHHHHHHHHCCCCCEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KADANFRDLQAQLEGTENRITVARNRYIDTVRVYNISVRTFPNNLTAMVMGYKPKANFTV
CCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEEEEEEEEECCCCEEEEEEECCCCCCEEE
EDEKAISTPPVVKFDTPATAK
CCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MRIRLYSVLLVVASLLSGCGYNQIQINDEGVNAAWSEVLNQYKRRADLIPNLVSVVQGYA
CEEHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHEKEVLTRVTEARANVAGMKITPELVNDEAAFAKFQKAQGELSGALSRLLVVAENYPNL
HHHHHHHHHHHHHHHCCCCCEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KADANFRDLQAQLEGTENRITVARNRYIDTVRVYNISVRTFPNNLTAMVMGYKPKANFTV
CCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEEEEEEEEECCCCEEEEEEECCCCCCEEE
EDEKAISTPPVVKFDTPATAK
CCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]