| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906746
Identifier: 71906746
GI number: 71906746
Start: 1208939
End: 1210714
Strand: Reverse
Name: 71906746
Synonym: Daro_1107
Alternate gene names: NA
Gene position: 1210714-1208939 (Counterclockwise)
Preceding gene: 71906747
Following gene: 71906744
Centisome position: 26.9
GC content: 41.78
Gene sequence:
>1776_bases ATGGCTGTCCTTCGTATAACCAGTGTTCGATTTAGTAGATATAAGGCTTTCGATGATTTTCAAATAGCCCTGCAGGATTT TAATGTCTTGGTTGGGCCAAATAACGCAGGGAAGTCCACGATTATCAGTGCATTTCGTATTTTGGCAGAGGGGATGCGGC GTGCAAGAGCAAGAAGTCCGGAGCGAATTGATGTACCCACCTTTTCCGGCTTGGGTTACAGGATAAACATAAATGAACTC CCGATTGCTTCGGAAAACATCTTCTTTGATTATGACGATAGCACCCCAGCTCAGATCAAGTTCCGACTTTCAAATGGAAA CCATCTAAGGCTTTTATTTCCAGAGCAGCGGTCATGTATTTTGATTGCTGAGTCCAATGGAAAACTTCCTCGCACCCCTT CTCAATTTAAGGCTGATTTTGACTTTGAGATTGGTTTTGTCCCAATTCTAGGCCCTGTGGATCAGAAAGAGTCGCTATAT GCGAAAGAAGCTGCCCGTTTGGCGCTATTAACATCAGGTGCCTCCAGAAATTTCAGAAACATTTGGTATCATTACCCTGA AGGTTTTGACTCATTTCGCCAACTGATAAAAACAACTTGGCCAGGGATGGATATTGAACCTCCTGAGCTATCTCCAAATC ATCGTGATCTTGCTATGTTTTGCCCAGAAGATCGCCACCCTCGTGAAATATGTTGGGCAGGCTACGGATTTCAAGTTTGG TGTCAGATGCTGACTCACGTCGTAAAAGCGTCAAAAGCATCTTTACTAGTTATCGATGAACCAGATATTTACCTTCACTC TGACCTCCAGCGTCAATTGGTTTCACTGCTGCGTGAATTAGGGCCAGATATTCTAATTGCCACTCATTCAACAGAAATAA TTGTTGAATGCGAACCAAACAATCTCGTTAATATTAGCAAGAAAAACAAGAGCGCTCAGCGCGTAAAGGACATCTCACAG CTTAAGCTTGTATTCTCAGCCCTTGGTTCTAATCTGAATCCAATTCTTACTCAGCTCTCCAAAACAAAACGTGTGGTTTT TGTTGAAGGGCTTGATTTTCAAATTATTAGCGTCTTTGCAAGGGTACTTGGTTATCAAAGAGTGGCCAATCGTTCAGATT TTGCAGTTGTAAAAATTGAAGGATTCAATCCAAAGAGAGCTGTTGACCTTACTTCCGGCATTGAAGCTACTGTAGGTAGT AACATTGCGCGCGCTGTTATTCTTGATCGAGACTATAGACCAGAGTCAGAAATTATTGACGTAACGAAAGAACTGCAAAA ACATGGATTTATGGCTCATATCCACAAACGCAAGGAAATTGAAAATTATCTTCTGGATAAAAATGCATTGGAACGTGCAA TTGATTCCCGTTTGATCGAACGAGCTCGACGATCTGGAACAGCAAAACAAGAATTGCCAGATGTCGAAAAAATTATCGAA GATGCGATGAAAACGTGCAAGCATTCAGTATTTGGACAAATTCAAGCTAGAGCAGTAGAGTTTTCTCGGAAGAAAACACC TCATATTGATCAAGCCACAATTACTGAGGAAATTTCTAGAGAATTTGAAGAACAGTGGTCCTCTAGTGCAGGCCGCTTAG CCTTGGTACCGGGAAAAGAAGTATTAGCATCAATTAATGCTGCGCTTCAGTCATCTGTCGGAATTTCGGTATCTGATGGT CAGATCGTGGGAAGTTTCAAGCCGACTGAGGTACACCAAGACATTAAGAACCTTATCGATGAATTAGGAAAATTCTCAAC ATCCAATAACCAATAG
Upstream 100 bases:
>100_bases TGACTAGGGCGACTAGGGAGTTGGTGGTGGTTGGCGGTGAAACCAGTTAACTCTGGCCCTATTTATATTAACTTGAAAAT TTCATGAATAAGGTTATTAA
Downstream 100 bases:
>100_bases CTAAAGGGGTCAGAACGAATTGGTTTTTCTGACTCCCACGGTCAACCGCAACAATAGGGGTCAGACCCCTGTCGTTTAAC TAGCTCAGCCTTCGATCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 591; Mature: 590
Protein sequence:
>591_residues MAVLRITSVRFSRYKAFDDFQIALQDFNVLVGPNNAGKSTIISAFRILAEGMRRARARSPERIDVPTFSGLGYRININEL PIASENIFFDYDDSTPAQIKFRLSNGNHLRLLFPEQRSCILIAESNGKLPRTPSQFKADFDFEIGFVPILGPVDQKESLY AKEAARLALLTSGASRNFRNIWYHYPEGFDSFRQLIKTTWPGMDIEPPELSPNHRDLAMFCPEDRHPREICWAGYGFQVW CQMLTHVVKASKASLLVIDEPDIYLHSDLQRQLVSLLRELGPDILIATHSTEIIVECEPNNLVNISKKNKSAQRVKDISQ LKLVFSALGSNLNPILTQLSKTKRVVFVEGLDFQIISVFARVLGYQRVANRSDFAVVKIEGFNPKRAVDLTSGIEATVGS NIARAVILDRDYRPESEIIDVTKELQKHGFMAHIHKRKEIENYLLDKNALERAIDSRLIERARRSGTAKQELPDVEKIIE DAMKTCKHSVFGQIQARAVEFSRKKTPHIDQATITEEISREFEEQWSSSAGRLALVPGKEVLASINAALQSSVGISVSDG QIVGSFKPTEVHQDIKNLIDELGKFSTSNNQ
Sequences:
>Translated_591_residues MAVLRITSVRFSRYKAFDDFQIALQDFNVLVGPNNAGKSTIISAFRILAEGMRRARARSPERIDVPTFSGLGYRININEL PIASENIFFDYDDSTPAQIKFRLSNGNHLRLLFPEQRSCILIAESNGKLPRTPSQFKADFDFEIGFVPILGPVDQKESLY AKEAARLALLTSGASRNFRNIWYHYPEGFDSFRQLIKTTWPGMDIEPPELSPNHRDLAMFCPEDRHPREICWAGYGFQVW CQMLTHVVKASKASLLVIDEPDIYLHSDLQRQLVSLLRELGPDILIATHSTEIIVECEPNNLVNISKKNKSAQRVKDISQ LKLVFSALGSNLNPILTQLSKTKRVVFVEGLDFQIISVFARVLGYQRVANRSDFAVVKIEGFNPKRAVDLTSGIEATVGS NIARAVILDRDYRPESEIIDVTKELQKHGFMAHIHKRKEIENYLLDKNALERAIDSRLIERARRSGTAKQELPDVEKIIE DAMKTCKHSVFGQIQARAVEFSRKKTPHIDQATITEEISREFEEQWSSSAGRLALVPGKEVLASINAALQSSVGISVSDG QIVGSFKPTEVHQDIKNLIDELGKFSTSNNQ >Mature_590_residues AVLRITSVRFSRYKAFDDFQIALQDFNVLVGPNNAGKSTIISAFRILAEGMRRARARSPERIDVPTFSGLGYRININELP IASENIFFDYDDSTPAQIKFRLSNGNHLRLLFPEQRSCILIAESNGKLPRTPSQFKADFDFEIGFVPILGPVDQKESLYA KEAARLALLTSGASRNFRNIWYHYPEGFDSFRQLIKTTWPGMDIEPPELSPNHRDLAMFCPEDRHPREICWAGYGFQVWC QMLTHVVKASKASLLVIDEPDIYLHSDLQRQLVSLLRELGPDILIATHSTEIIVECEPNNLVNISKKNKSAQRVKDISQL KLVFSALGSNLNPILTQLSKTKRVVFVEGLDFQIISVFARVLGYQRVANRSDFAVVKIEGFNPKRAVDLTSGIEATVGSN IARAVILDRDYRPESEIIDVTKELQKHGFMAHIHKRKEIENYLLDKNALERAIDSRLIERARRSGTAKQELPDVEKIIED AMKTCKHSVFGQIQARAVEFSRKKTPHIDQATITEEISREFEEQWSSSAGRLALVPGKEVLASINAALQSSVGISVSDGQ IVGSFKPTEVHQDIKNLIDELGKFSTSNNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66610; Mature: 66479
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLRITSVRFSRYKAFDDFQIALQDFNVLVGPNNAGKSTIISAFRILAEGMRRARARSP CEEEEEEHHHHHHHCCCCHHHHEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC ERIDVPTFSGLGYRININELPIASENIFFDYDDSTPAQIKFRLSNGNHLRLLFPEQRSCI CEECCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEE LIAESNGKLPRTPSQFKADFDFEIGFVPILGPVDQKESLYAKEAARLALLTSGASRNFRN EEECCCCCCCCCHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHEEEEECCCCCCCCC IWYHYPEGFDSFRQLIKTTWPGMDIEPPELSPNHRDLAMFCPEDRHPREICWAGYGFQVW EEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHEECCCCHHHH CQMLTHVVKASKASLLVIDEPDIYLHSDLQRQLVSLLRELGPDILIATHSTEIIVECEPN HHHHHHHHHCCCCCEEEEECCCCEECCHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCC NLVNISKKNKSAQRVKDISQLKLVFSALGSNLNPILTQLSKTKRVVFVEGLDFQIISVFA CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCHHHHHHHH RVLGYQRVANRSDFAVVKIEGFNPKRAVDLTSGIEATVGSNIARAVILDRDYRPESEIID HHHHHHHHCCCCCEEEEEEECCCCCCEEECCCCCCHHHCCCCEEEEEECCCCCCHHHHHH VTKELQKHGFMAHIHKRKEIENYLLDKNALERAIDSRLIERARRSGTAKQELPDVEKIIE HHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHH DAMKTCKHSVFGQIQARAVEFSRKKTPHIDQATITEEISREFEEQWSSSAGRLALVPGKE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHH VLASINAALQSSVGISVSDGQIVGSFKPTEVHQDIKNLIDELGKFSTSNNQ HHHHHHHHHHHCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AVLRITSVRFSRYKAFDDFQIALQDFNVLVGPNNAGKSTIISAFRILAEGMRRARARSP EEEEEEHHHHHHHCCCCHHHHEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC ERIDVPTFSGLGYRININELPIASENIFFDYDDSTPAQIKFRLSNGNHLRLLFPEQRSCI CEECCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEE LIAESNGKLPRTPSQFKADFDFEIGFVPILGPVDQKESLYAKEAARLALLTSGASRNFRN EEECCCCCCCCCHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHEEEEECCCCCCCCC IWYHYPEGFDSFRQLIKTTWPGMDIEPPELSPNHRDLAMFCPEDRHPREICWAGYGFQVW EEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHEECCCCHHHH CQMLTHVVKASKASLLVIDEPDIYLHSDLQRQLVSLLRELGPDILIATHSTEIIVECEPN HHHHHHHHHCCCCCEEEEECCCCEECCHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCC NLVNISKKNKSAQRVKDISQLKLVFSALGSNLNPILTQLSKTKRVVFVEGLDFQIISVFA CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCHHHHHHHH RVLGYQRVANRSDFAVVKIEGFNPKRAVDLTSGIEATVGSNIARAVILDRDYRPESEIID HHHHHHHHCCCCCEEEEEEECCCCCCEEECCCCCCHHHCCCCEEEEEECCCCCCHHHHHH VTKELQKHGFMAHIHKRKEIENYLLDKNALERAIDSRLIERARRSGTAKQELPDVEKIIE HHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHH DAMKTCKHSVFGQIQARAVEFSRKKTPHIDQATITEEISREFEEQWSSSAGRLALVPGKE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHH VLASINAALQSSVGISVSDGQIVGSFKPTEVHQDIKNLIDELGKFSTSNNQ HHHHHHHHHHHCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA