| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906723
Identifier: 71906723
GI number: 71906723
Start: 1187907
End: 1188725
Strand: Reverse
Name: 71906723
Synonym: Daro_1084
Alternate gene names: NA
Gene position: 1188725-1187907 (Counterclockwise)
Preceding gene: 71906724
Following gene: 71906722
Centisome position: 26.41
GC content: 58.24
Gene sequence:
>819_bases ATGAAAAAAATCTCCGTGTCCATCCTGGCTGTTGGTGCCGCCGCCCTGGGTGCCGCCTTTTCCGCTCCGGCTTTTGCAGA AGAAGCCGCTGCATCCGCTGCTGAAGTTCCCGCCCTGACCGGCAACCTTGGCCTGTTCTCCAGCTACCGCTTCCGTGGTA TCGATCAGACTTTCGGCAAGCCGGCCCTGCAAGGTGGTTTTGACTACGCCCACTCCAGCGGTGTCTATGTCGGCAACTGG AACTCCAACGTCAATTCCGGTGCCGGCTACCCGGAAGGCAATCTGGAAATGGACTTCTACGGTGGTTACAAGCAAGCCAT CGGCGATTTCGGCATTGACGTCGGCGGTCTGTATTACTACTACCCGGGCTCCACCTACCTGAACAAGACTGTCAAGAACG GCGAGTTCTACGTCGGCGCCAGTTGGAAGTTCGTCACCCTGAAGTACTCCTACGCGGTGACCGATTACTTCGGCGCCAAG ACCAGCACCGGTGGTGACACCAAGGGTTCCAGCTACATCGACCTCAGCGCCAACTACGATCTGGGCGGGGGCTGGGGCAT CAACGGCCATGTTGGCCACCTCGACTTTGCCAAGATCAGCAACGGTTCTTACACCGACTGGAAGATCGGCGTGACCAAGG ATCTGAGCGGCTGGGTTGTCGGTCTTGCCTATATCGGCACCGATGCCAAGGGCGACTGTGCTGCCGCTGAGTTCTATTGC TTCTCCAGCGACCTGAGCCCCGCAGGAGTTCAGACGGGTACGAAAACCAGAGATGCCGGTCGTGGCACCGCCGTTCTCTC CGTAACCAAGAGTTTCTAA
Upstream 100 bases:
>100_bases AAGGTCGCCAATGGGGTGTCTTCGGCGAACCCCGGGTCAATGTGCTGCAACTCAACATTGCGCTTGATTCCGTTAGCAAA TAAACCATAGAAAGACTCTT
Downstream 100 bases:
>100_bases GTCAAGGCAGATGCCAGCGCTTAAAACAGTGCGATGGGGAGCGGGCCGTTCCGCTCCCTTTTACCGCCAGTGGATCGAGC GATGGCGGGTACATCACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MKKISVSILAVGAAALGAAFSAPAFAEEAAASAAEVPALTGNLGLFSSYRFRGIDQTFGKPALQGGFDYAHSSGVYVGNW NSNVNSGAGYPEGNLEMDFYGGYKQAIGDFGIDVGGLYYYYPGSTYLNKTVKNGEFYVGASWKFVTLKYSYAVTDYFGAK TSTGGDTKGSSYIDLSANYDLGGGWGINGHVGHLDFAKISNGSYTDWKIGVTKDLSGWVVGLAYIGTDAKGDCAAAEFYC FSSDLSPAGVQTGTKTRDAGRGTAVLSVTKSF
Sequences:
>Translated_272_residues MKKISVSILAVGAAALGAAFSAPAFAEEAAASAAEVPALTGNLGLFSSYRFRGIDQTFGKPALQGGFDYAHSSGVYVGNW NSNVNSGAGYPEGNLEMDFYGGYKQAIGDFGIDVGGLYYYYPGSTYLNKTVKNGEFYVGASWKFVTLKYSYAVTDYFGAK TSTGGDTKGSSYIDLSANYDLGGGWGINGHVGHLDFAKISNGSYTDWKIGVTKDLSGWVVGLAYIGTDAKGDCAAAEFYC FSSDLSPAGVQTGTKTRDAGRGTAVLSVTKSF >Mature_272_residues MKKISVSILAVGAAALGAAFSAPAFAEEAAASAAEVPALTGNLGLFSSYRFRGIDQTFGKPALQGGFDYAHSSGVYVGNW NSNVNSGAGYPEGNLEMDFYGGYKQAIGDFGIDVGGLYYYYPGSTYLNKTVKNGEFYVGASWKFVTLKYSYAVTDYFGAK TSTGGDTKGSSYIDLSANYDLGGGWGINGHVGHLDFAKISNGSYTDWKIGVTKDLSGWVVGLAYIGTDAKGDCAAAEFYC FSSDLSPAGVQTGTKTRDAGRGTAVLSVTKSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28478; Mature: 28478
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKISVSILAVGAAALGAAFSAPAFAEEAAASAAEVPALTGNLGLFSSYRFRGIDQTFGK CCEEEEEEEEECHHHHHHHHCCCHHHHHHHCCHHCCCEEECCCCCCCCCEECCCHHHCCC PALQGGFDYAHSSGVYVGNWNSNVNSGAGYPEGNLEMDFYGGYKQAIGDFGIDVGGLYYY CHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCEEEE YPGSTYLNKTVKNGEFYVGASWKFVTLKYSYAVTDYFGAKTSTGGDTKGSSYIDLSANYD ECCCCEEHHEECCCCEEEECCEEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCC LGGGWGINGHVGHLDFAKISNGSYTDWKIGVTKDLSGWVVGLAYIGTDAKGDCAAAEFYC CCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEEE FSSDLSPAGVQTGTKTRDAGRGTAVLSVTKSF EECCCCCCCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MKKISVSILAVGAAALGAAFSAPAFAEEAAASAAEVPALTGNLGLFSSYRFRGIDQTFGK CCEEEEEEEEECHHHHHHHHCCCHHHHHHHCCHHCCCEEECCCCCCCCCEECCCHHHCCC PALQGGFDYAHSSGVYVGNWNSNVNSGAGYPEGNLEMDFYGGYKQAIGDFGIDVGGLYYY CHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCEEEE YPGSTYLNKTVKNGEFYVGASWKFVTLKYSYAVTDYFGAKTSTGGDTKGSSYIDLSANYD ECCCCEEHHEECCCCEEEECCEEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCC LGGGWGINGHVGHLDFAKISNGSYTDWKIGVTKDLSGWVVGLAYIGTDAKGDCAAAEFYC CCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEEE FSSDLSPAGVQTGTKTRDAGRGTAVLSVTKSF EECCCCCCCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA