| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is ydeG [H]
Identifier: 71906708
GI number: 71906708
Start: 1171209
End: 1172417
Strand: Reverse
Name: ydeG [H]
Synonym: Daro_1069
Alternate gene names: 71906708
Gene position: 1172417-1171209 (Counterclockwise)
Preceding gene: 71906710
Following gene: 71906707
Centisome position: 26.05
GC content: 65.01
Gene sequence:
>1209_bases ATGTCGATCCAGCCTGAGCCTTCCCCACGCGTTGTCATGCGCCGCAATGTCCTGCTGCTTGCCCTGTCGCAGGCGGCAGT GATGACCAGCATCAGCCTCGTGCTGGCTTCTTCGGTGCTGATCGGCGTGCAACTCGCTTCGCCGGCGCTATCGACCTTGC CGCTGGCGCTGCAGTACCTGAGCACGATGCTGGTGCTCTACCCGGTGGCGCGGTTGATCAGCCGCTACGGGCATCGCCCG GTATTTTTCGGTGGGGCGCTGTTGGGCGCACTGGGTTTGGCGATCGCGGCGGCCGGTATCTGGCTGGGCAATTTTGTGCT GTTCGCCCTGGCTGGTGGGCTGATCGGCATTTTCAACGCGGTCAGCCAGTACTACCGCTTTGCTGCCGCCGACGCGGTGC CGGTTGAGCGACGGAGTTCAGCCATTTCCCTGACCTTGAGTGGCGGCGTGCTGGCGGCGCTGGCCGGCCCGAGCCTGGCC CGGTGGACCAAGGATGCGCTGCAGCCAGCCTTTGCCGCCAGTTTTCTGGCCCTGGTGGGCGTTGCCCTGCTCGCCGCCTG GCTGGCGACCCGTTTGCGCCTGGCGCCACCGGCAGTGACCGATCAGCAGCGCCCGCCGGCACCGTTCGCCCCGCTCCTGC GCCAGCCGGATTTCCTGCTGGCGGTAGTCGTCGGTGTCGTCGGCTATGCCTTGATGAACCTGCTAATGACGGCAACGCCG CTGGCGATGATGTGCAGCCACCTTGGCTTTGCCGAGACGGCGACGGTAATTCAGTGGCACGTCGTCGCGATGTTTGCGCC CTCCTTCTTCACCGGGGCATTGATCCAGCGGATTGGCGTGCTGCCGGTGATGTTGCTGGGTGGCGCTGGCCTGCTCGGTT GCATCGCGGTCGCGGTTAACGGCGACAGCCTGCCGCATTTCGAACTGGCGCTGATCATGCTCGGCATCGGCTGGAATTTC CTTTACGTCGGTGCCACGACGCGTCTGGTCGAAATCTGCCCGCCCGAGCAGAAAGCCCGCGTCCAGGCGTTTAACGACAG CCTGGTCTTTCTCGCCATTGCCGGTGTGACCTTCAGTTCAGGCAGCCTGGTCGACCGCTTCGGCTGGCCGGCACTGAATC TCTACGCCGCAATTCCGGTGCTGCTGATCATGCTGGCGATCCTCGGTCGCTGGCTTGCGACAGGGCGCCGGCAATGGCGG GTCGCATGA
Upstream 100 bases:
>100_bases TTTTTGCATGGCACAAATCGTGGGAAAGTTGTCATTTGAGACATTAATCCTTTTCGGCAAGATGGGAAACACCTAATCAA GCCTGCCAAGGAGAACCCCT
Downstream 100 bases:
>100_bases GTTGCTTCCCGTCGCCCCACCGTTCAGCGCCGGTTTTCCCATTTGCTAACGCGTCGCAATTGCAAAAACTTGGGCCAGAT CATCAAAAGCTGATGTGATC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MSIQPEPSPRVVMRRNVLLLALSQAAVMTSISLVLASSVLIGVQLASPALSTLPLALQYLSTMLVLYPVARLISRYGHRP VFFGGALLGALGLAIAAAGIWLGNFVLFALAGGLIGIFNAVSQYYRFAAADAVPVERRSSAISLTLSGGVLAALAGPSLA RWTKDALQPAFAASFLALVGVALLAAWLATRLRLAPPAVTDQQRPPAPFAPLLRQPDFLLAVVVGVVGYALMNLLMTATP LAMMCSHLGFAETATVIQWHVVAMFAPSFFTGALIQRIGVLPVMLLGGAGLLGCIAVAVNGDSLPHFELALIMLGIGWNF LYVGATTRLVEICPPEQKARVQAFNDSLVFLAIAGVTFSSGSLVDRFGWPALNLYAAIPVLLIMLAILGRWLATGRRQWR VA
Sequences:
>Translated_402_residues MSIQPEPSPRVVMRRNVLLLALSQAAVMTSISLVLASSVLIGVQLASPALSTLPLALQYLSTMLVLYPVARLISRYGHRP VFFGGALLGALGLAIAAAGIWLGNFVLFALAGGLIGIFNAVSQYYRFAAADAVPVERRSSAISLTLSGGVLAALAGPSLA RWTKDALQPAFAASFLALVGVALLAAWLATRLRLAPPAVTDQQRPPAPFAPLLRQPDFLLAVVVGVVGYALMNLLMTATP LAMMCSHLGFAETATVIQWHVVAMFAPSFFTGALIQRIGVLPVMLLGGAGLLGCIAVAVNGDSLPHFELALIMLGIGWNF LYVGATTRLVEICPPEQKARVQAFNDSLVFLAIAGVTFSSGSLVDRFGWPALNLYAAIPVLLIMLAILGRWLATGRRQWR VA >Mature_401_residues SIQPEPSPRVVMRRNVLLLALSQAAVMTSISLVLASSVLIGVQLASPALSTLPLALQYLSTMLVLYPVARLISRYGHRPV FFGGALLGALGLAIAAAGIWLGNFVLFALAGGLIGIFNAVSQYYRFAAADAVPVERRSSAISLTLSGGVLAALAGPSLAR WTKDALQPAFAASFLALVGVALLAAWLATRLRLAPPAVTDQQRPPAPFAPLLRQPDFLLAVVVGVVGYALMNLLMTATPL AMMCSHLGFAETATVIQWHVVAMFAPSFFTGALIQRIGVLPVMLLGGAGLLGCIAVAVNGDSLPHFELALIMLGIGWNFL YVGATTRLVEICPPEQKARVQAFNDSLVFLAIAGVTFSSGSLVDRFGWPALNLYAAIPVLLIMLAILGRWLATGRRQWRV A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42477; Mature: 42346
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQPEPSPRVVMRRNVLLLALSQAAVMTSISLVLASSVLIGVQLASPALSTLPLALQYL CCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH STMLVLYPVARLISRYGHRPVFFGGALLGALGLAIAAAGIWLGNFVLFALAGGLIGIFNA HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSQYYRFAAADAVPVERRSSAISLTLSGGVLAALAGPSLARWTKDALQPAFAASFLALVG HHHHHHHHHCCCCCHHCCCCEEEEEECCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHH VALLAAWLATRLRLAPPAVTDQQRPPAPFAPLLRQPDFLLAVVVGVVGYALMNLLMTATP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LAMMCSHLGFAETATVIQWHVVAMFAPSFFTGALIQRIGVLPVMLLGGAGLLGCIAVAVN HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEC GDSLPHFELALIMLGIGWNFLYVGATTRLVEICPPEQKARVQAFNDSLVFLAIAGVTFSS CCCCCHHHHHHHHHHCCCCEEEECCHHHEEEECCCCHHHHHHHHCCCEEEEEEECCEECC GSLVDRFGWPALNLYAAIPVLLIMLAILGRWLATGRRQWRVA CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SIQPEPSPRVVMRRNVLLLALSQAAVMTSISLVLASSVLIGVQLASPALSTLPLALQYL CCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH STMLVLYPVARLISRYGHRPVFFGGALLGALGLAIAAAGIWLGNFVLFALAGGLIGIFNA HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSQYYRFAAADAVPVERRSSAISLTLSGGVLAALAGPSLARWTKDALQPAFAASFLALVG HHHHHHHHHCCCCCHHCCCCEEEEEECCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHH VALLAAWLATRLRLAPPAVTDQQRPPAPFAPLLRQPDFLLAVVVGVVGYALMNLLMTATP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LAMMCSHLGFAETATVIQWHVVAMFAPSFFTGALIQRIGVLPVMLLGGAGLLGCIAVAVN HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEC GDSLPHFELALIMLGIGWNFLYVGATTRLVEICPPEQKARVQAFNDSLVFLAIAGVTFSS CCCCCHHHHHHHHHHCCCCEEEECCHHHEEEECCCCHHHHHHHHCCCEEEEEEECCEECC GSLVDRFGWPALNLYAAIPVLLIMLAILGRWLATGRRQWRVA CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]