Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is ydeG [H]

Identifier: 71906708

GI number: 71906708

Start: 1171209

End: 1172417

Strand: Reverse

Name: ydeG [H]

Synonym: Daro_1069

Alternate gene names: 71906708

Gene position: 1172417-1171209 (Counterclockwise)

Preceding gene: 71906710

Following gene: 71906707

Centisome position: 26.05

GC content: 65.01

Gene sequence:

>1209_bases
ATGTCGATCCAGCCTGAGCCTTCCCCACGCGTTGTCATGCGCCGCAATGTCCTGCTGCTTGCCCTGTCGCAGGCGGCAGT
GATGACCAGCATCAGCCTCGTGCTGGCTTCTTCGGTGCTGATCGGCGTGCAACTCGCTTCGCCGGCGCTATCGACCTTGC
CGCTGGCGCTGCAGTACCTGAGCACGATGCTGGTGCTCTACCCGGTGGCGCGGTTGATCAGCCGCTACGGGCATCGCCCG
GTATTTTTCGGTGGGGCGCTGTTGGGCGCACTGGGTTTGGCGATCGCGGCGGCCGGTATCTGGCTGGGCAATTTTGTGCT
GTTCGCCCTGGCTGGTGGGCTGATCGGCATTTTCAACGCGGTCAGCCAGTACTACCGCTTTGCTGCCGCCGACGCGGTGC
CGGTTGAGCGACGGAGTTCAGCCATTTCCCTGACCTTGAGTGGCGGCGTGCTGGCGGCGCTGGCCGGCCCGAGCCTGGCC
CGGTGGACCAAGGATGCGCTGCAGCCAGCCTTTGCCGCCAGTTTTCTGGCCCTGGTGGGCGTTGCCCTGCTCGCCGCCTG
GCTGGCGACCCGTTTGCGCCTGGCGCCACCGGCAGTGACCGATCAGCAGCGCCCGCCGGCACCGTTCGCCCCGCTCCTGC
GCCAGCCGGATTTCCTGCTGGCGGTAGTCGTCGGTGTCGTCGGCTATGCCTTGATGAACCTGCTAATGACGGCAACGCCG
CTGGCGATGATGTGCAGCCACCTTGGCTTTGCCGAGACGGCGACGGTAATTCAGTGGCACGTCGTCGCGATGTTTGCGCC
CTCCTTCTTCACCGGGGCATTGATCCAGCGGATTGGCGTGCTGCCGGTGATGTTGCTGGGTGGCGCTGGCCTGCTCGGTT
GCATCGCGGTCGCGGTTAACGGCGACAGCCTGCCGCATTTCGAACTGGCGCTGATCATGCTCGGCATCGGCTGGAATTTC
CTTTACGTCGGTGCCACGACGCGTCTGGTCGAAATCTGCCCGCCCGAGCAGAAAGCCCGCGTCCAGGCGTTTAACGACAG
CCTGGTCTTTCTCGCCATTGCCGGTGTGACCTTCAGTTCAGGCAGCCTGGTCGACCGCTTCGGCTGGCCGGCACTGAATC
TCTACGCCGCAATTCCGGTGCTGCTGATCATGCTGGCGATCCTCGGTCGCTGGCTTGCGACAGGGCGCCGGCAATGGCGG
GTCGCATGA

Upstream 100 bases:

>100_bases
TTTTTGCATGGCACAAATCGTGGGAAAGTTGTCATTTGAGACATTAATCCTTTTCGGCAAGATGGGAAACACCTAATCAA
GCCTGCCAAGGAGAACCCCT

Downstream 100 bases:

>100_bases
GTTGCTTCCCGTCGCCCCACCGTTCAGCGCCGGTTTTCCCATTTGCTAACGCGTCGCAATTGCAAAAACTTGGGCCAGAT
CATCAAAAGCTGATGTGATC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MSIQPEPSPRVVMRRNVLLLALSQAAVMTSISLVLASSVLIGVQLASPALSTLPLALQYLSTMLVLYPVARLISRYGHRP
VFFGGALLGALGLAIAAAGIWLGNFVLFALAGGLIGIFNAVSQYYRFAAADAVPVERRSSAISLTLSGGVLAALAGPSLA
RWTKDALQPAFAASFLALVGVALLAAWLATRLRLAPPAVTDQQRPPAPFAPLLRQPDFLLAVVVGVVGYALMNLLMTATP
LAMMCSHLGFAETATVIQWHVVAMFAPSFFTGALIQRIGVLPVMLLGGAGLLGCIAVAVNGDSLPHFELALIMLGIGWNF
LYVGATTRLVEICPPEQKARVQAFNDSLVFLAIAGVTFSSGSLVDRFGWPALNLYAAIPVLLIMLAILGRWLATGRRQWR
VA

Sequences:

>Translated_402_residues
MSIQPEPSPRVVMRRNVLLLALSQAAVMTSISLVLASSVLIGVQLASPALSTLPLALQYLSTMLVLYPVARLISRYGHRP
VFFGGALLGALGLAIAAAGIWLGNFVLFALAGGLIGIFNAVSQYYRFAAADAVPVERRSSAISLTLSGGVLAALAGPSLA
RWTKDALQPAFAASFLALVGVALLAAWLATRLRLAPPAVTDQQRPPAPFAPLLRQPDFLLAVVVGVVGYALMNLLMTATP
LAMMCSHLGFAETATVIQWHVVAMFAPSFFTGALIQRIGVLPVMLLGGAGLLGCIAVAVNGDSLPHFELALIMLGIGWNF
LYVGATTRLVEICPPEQKARVQAFNDSLVFLAIAGVTFSSGSLVDRFGWPALNLYAAIPVLLIMLAILGRWLATGRRQWR
VA
>Mature_401_residues
SIQPEPSPRVVMRRNVLLLALSQAAVMTSISLVLASSVLIGVQLASPALSTLPLALQYLSTMLVLYPVARLISRYGHRPV
FFGGALLGALGLAIAAAGIWLGNFVLFALAGGLIGIFNAVSQYYRFAAADAVPVERRSSAISLTLSGGVLAALAGPSLAR
WTKDALQPAFAASFLALVGVALLAAWLATRLRLAPPAVTDQQRPPAPFAPLLRQPDFLLAVVVGVVGYALMNLLMTATPL
AMMCSHLGFAETATVIQWHVVAMFAPSFFTGALIQRIGVLPVMLLGGAGLLGCIAVAVNGDSLPHFELALIMLGIGWNFL
YVGATTRLVEICPPEQKARVQAFNDSLVFLAIAGVTFSSGSLVDRFGWPALNLYAAIPVLLIMLAILGRWLATGRRQWRV
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42477; Mature: 42346

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQPEPSPRVVMRRNVLLLALSQAAVMTSISLVLASSVLIGVQLASPALSTLPLALQYL
CCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
STMLVLYPVARLISRYGHRPVFFGGALLGALGLAIAAAGIWLGNFVLFALAGGLIGIFNA
HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSQYYRFAAADAVPVERRSSAISLTLSGGVLAALAGPSLARWTKDALQPAFAASFLALVG
HHHHHHHHHCCCCCHHCCCCEEEEEECCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VALLAAWLATRLRLAPPAVTDQQRPPAPFAPLLRQPDFLLAVVVGVVGYALMNLLMTATP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAMMCSHLGFAETATVIQWHVVAMFAPSFFTGALIQRIGVLPVMLLGGAGLLGCIAVAVN
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEC
GDSLPHFELALIMLGIGWNFLYVGATTRLVEICPPEQKARVQAFNDSLVFLAIAGVTFSS
CCCCCHHHHHHHHHHCCCCEEEECCHHHEEEECCCCHHHHHHHHCCCEEEEEEECCEECC
GSLVDRFGWPALNLYAAIPVLLIMLAILGRWLATGRRQWRVA
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SIQPEPSPRVVMRRNVLLLALSQAAVMTSISLVLASSVLIGVQLASPALSTLPLALQYL
CCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
STMLVLYPVARLISRYGHRPVFFGGALLGALGLAIAAAGIWLGNFVLFALAGGLIGIFNA
HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSQYYRFAAADAVPVERRSSAISLTLSGGVLAALAGPSLARWTKDALQPAFAASFLALVG
HHHHHHHHHCCCCCHHCCCCEEEEEECCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VALLAAWLATRLRLAPPAVTDQQRPPAPFAPLLRQPDFLLAVVVGVVGYALMNLLMTATP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAMMCSHLGFAETATVIQWHVVAMFAPSFFTGALIQRIGVLPVMLLGGAGLLGCIAVAVN
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEC
GDSLPHFELALIMLGIGWNFLYVGATTRLVEICPPEQKARVQAFNDSLVFLAIAGVTFSS
CCCCCHHHHHHHHHHCCCCEEEECCHHHEEEECCCCHHHHHHHHCCCEEEEEEECCEECC
GSLVDRFGWPALNLYAAIPVLLIMLAILGRWLATGRRQWRVA
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]