| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906560
Identifier: 71906560
GI number: 71906560
Start: 997507
End: 998655
Strand: Reverse
Name: 71906560
Synonym: Daro_0921
Alternate gene names: NA
Gene position: 998655-997507 (Counterclockwise)
Preceding gene: 71906561
Following gene: 71906559
Centisome position: 22.19
GC content: 57.35
Gene sequence:
>1149_bases ATGAAAGCGATTCGCCTTATCCTGGCAGCCTGCCTTATCGGCACCGCAGCAATCCAGCCATCCCTCGCCGAAACGGGCGT CACCGACACGACGATCACGCTTGGCATGTCAGCCCCACTGACCGGACCGGCGAGCGGGCATGGCCAAGAACTGAAGAATG CCATCACCGCCTATTTTGACCAGGTGAACAAGAATGGCGGCGTGAATGGGCGAAAGCTTCAGTTGGCGGTCCTGGATGAT GGATACGAAGCCGAAAAGGCAGTCGCCAATACCAAGACACTGATCGAAACCAACAAGGTGTTCGCGCTGCTCGGTTACTA TGGCTCGGCCTCGATAACCGAAGCCATGAACAAGGGCTTCGGCCCGGCCCGTGTTCCGATGATTGGTGGCATTTCCGGCG CCATGGCGCTTCGCCAGCCGCCCGCTGGCAACCCGAACAATCGCTTCTTGTTCATACAGCGCGCCAGCTACGCTGACGAG GCAGAAGCCATCGGTCTCCAACTGGCCACCCTGGGCTTGAAAAACATTGCCGTCTTTTACCAGAATGATGGCTTCGGCAA GGCGGGTCTCGAAGGCCTGACCAATGCACTGAAGAAAAACAACCTGACCCCGTCGGCCACTGCCACGGTCGAACGCAACT CTGAAGACATCAGCAAGGCCGTTGAAACGATCGCCAAGGTCAATCCCCAGGCGGTGGTGATGGTCACCTTGTACAAACCG ACTGCGGCCATGGTCAAGGCGCTGCGCAAGGCCAACCAGAGTCCGATGTTCATGACCCTGTCGCCGGTTGGTCCGGACCA ACTAACCCAGGAACTGGGCAACGATGCCCGTGGTATCGGCATTTCTCAGGTCATGCCCTTCCCTTGGAACGACACCATTG CCATCGTCAAGGAGTACCAGCACCTGGTTGGCAAGCAGGCCACGTACTCTTACATGAGCCTTGAGGGATTCGTCATCGCG AAGATGGCCGTTGAGGCGATCCGCAAGGCTGGCGGCAAGGAGCTCTCGCGAGAAAAACTGATCTCCACCCTTGAAGGCCT GAATCAGGACTTTGGCGGCTATCGCATCAGCTTCAGCCCCAATAGCCATGCTGGTTCGCAATATGTCCAACTAACAGTGA TCGGTGCTGGCGGCAAGCTGATCAAATAA
Upstream 100 bases:
>100_bases TCATACGACAAATATCTCTATTCCATGCGCTTTTGTGACAACGGCAAGCCTTACACCCATATAATTTGAAAATAATCCAG CACTCCATAGCGAGAAACTA
Downstream 100 bases:
>100_bases GCAGCCGGAATTTCACCGATAAGCCGACGGGCTGTGCGCCATGCGCCAGCCCTTTTTTACGCTCACGAAATCCCCTTCGC CCGCTGGTTTGCCGCCCCTT
Product: extracellular ligand-binding receptor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKAIRLILAACLIGTAAIQPSLAETGVTDTTITLGMSAPLTGPASGHGQELKNAITAYFDQVNKNGGVNGRKLQLAVLDD GYEAEKAVANTKTLIETNKVFALLGYYGSASITEAMNKGFGPARVPMIGGISGAMALRQPPAGNPNNRFLFIQRASYADE AEAIGLQLATLGLKNIAVFYQNDGFGKAGLEGLTNALKKNNLTPSATATVERNSEDISKAVETIAKVNPQAVVMVTLYKP TAAMVKALRKANQSPMFMTLSPVGPDQLTQELGNDARGIGISQVMPFPWNDTIAIVKEYQHLVGKQATYSYMSLEGFVIA KMAVEAIRKAGGKELSREKLISTLEGLNQDFGGYRISFSPNSHAGSQYVQLTVIGAGGKLIK
Sequences:
>Translated_382_residues MKAIRLILAACLIGTAAIQPSLAETGVTDTTITLGMSAPLTGPASGHGQELKNAITAYFDQVNKNGGVNGRKLQLAVLDD GYEAEKAVANTKTLIETNKVFALLGYYGSASITEAMNKGFGPARVPMIGGISGAMALRQPPAGNPNNRFLFIQRASYADE AEAIGLQLATLGLKNIAVFYQNDGFGKAGLEGLTNALKKNNLTPSATATVERNSEDISKAVETIAKVNPQAVVMVTLYKP TAAMVKALRKANQSPMFMTLSPVGPDQLTQELGNDARGIGISQVMPFPWNDTIAIVKEYQHLVGKQATYSYMSLEGFVIA KMAVEAIRKAGGKELSREKLISTLEGLNQDFGGYRISFSPNSHAGSQYVQLTVIGAGGKLIK >Mature_382_residues MKAIRLILAACLIGTAAIQPSLAETGVTDTTITLGMSAPLTGPASGHGQELKNAITAYFDQVNKNGGVNGRKLQLAVLDD GYEAEKAVANTKTLIETNKVFALLGYYGSASITEAMNKGFGPARVPMIGGISGAMALRQPPAGNPNNRFLFIQRASYADE AEAIGLQLATLGLKNIAVFYQNDGFGKAGLEGLTNALKKNNLTPSATATVERNSEDISKAVETIAKVNPQAVVMVTLYKP TAAMVKALRKANQSPMFMTLSPVGPDQLTQELGNDARGIGISQVMPFPWNDTIAIVKEYQHLVGKQATYSYMSLEGFVIA KMAVEAIRKAGGKELSREKLISTLEGLNQDFGGYRISFSPNSHAGSQYVQLTVIGAGGKLIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40489; Mature: 40489
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAIRLILAACLIGTAAIQPSLAETGVTDTTITLGMSAPLTGPASGHGQELKNAITAYFD CHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH QVNKNGGVNGRKLQLAVLDDGYEAEKAVANTKTLIETNKVFALLGYYGSASITEAMNKGF HHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHCCC GPARVPMIGGISGAMALRQPPAGNPNNRFLFIQRASYADEAEAIGLQLATLGLKNIAVFY CCCCCCEECCCCHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHEEECCCEEEEEE QNDGFGKAGLEGLTNALKKNNLTPSATATVERNSEDISKAVETIAKVNPQAVVMVTLYKP ECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEECC TAAMVKALRKANQSPMFMTLSPVGPDQLTQELGNDARGIGISQVMPFPWNDTIAIVKEYQ HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHH HLVGKQATYSYMSLEGFVIAKMAVEAIRKAGGKELSREKLISTLEGLNQDFGGYRISFSP HHHCCCHHHHEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECC NSHAGSQYVQLTVIGAGGKLIK CCCCCCEEEEEEEEECCCCCCC >Mature Secondary Structure MKAIRLILAACLIGTAAIQPSLAETGVTDTTITLGMSAPLTGPASGHGQELKNAITAYFD CHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH QVNKNGGVNGRKLQLAVLDDGYEAEKAVANTKTLIETNKVFALLGYYGSASITEAMNKGF HHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHCCC GPARVPMIGGISGAMALRQPPAGNPNNRFLFIQRASYADEAEAIGLQLATLGLKNIAVFY CCCCCCEECCCCHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHEEECCCEEEEEE QNDGFGKAGLEGLTNALKKNNLTPSATATVERNSEDISKAVETIAKVNPQAVVMVTLYKP ECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEECC TAAMVKALRKANQSPMFMTLSPVGPDQLTQELGNDARGIGISQVMPFPWNDTIAIVKEYQ HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHH HLVGKQATYSYMSLEGFVIAKMAVEAIRKAGGKELSREKLISTLEGLNQDFGGYRISFSP HHHCCCHHHHEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECC NSHAGSQYVQLTVIGAGGKLIK CCCCCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA