| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906559
Identifier: 71906559
GI number: 71906559
Start: 996174
End: 997322
Strand: Reverse
Name: 71906559
Synonym: Daro_0920
Alternate gene names: NA
Gene position: 997322-996174 (Counterclockwise)
Preceding gene: 71906560
Following gene: 71906557
Centisome position: 22.16
GC content: 56.14
Gene sequence:
>1149_bases ATGAAACCACTACATAAGCTACTACTCGCCAGCATATTGGCGCTGGGCATGACTCAAACACATGCGGAAGTCGGGGTTAC CGACACCAGTATCACGCTGGGCATGTCCGCCCCCTTCACCGGGCCCAACGGGCTGTACGGCATGCAGATGCGGGAAGCCA TCACGGCTCATTTCGATCAGCTCAATAAAAGCGGCGGCATCAACGGGCGAAAACTCGAACTGATCACGATCGATGATGGC TACGAAACCGATCGCACCCTGGCCAACACCAAAACCCTGATTCAGGACAAGCAAGTCTTCGCGCTGATGGGTTATTACGG ATCCACACCGACGACCGAAGCCATGAACAAGGTCTTCGGTCCCGCCAAAGTGCCGCTCATTGGCACAATTTCGGGGGCTG GAACGCTCCGTGAACCCCTAGCAAGCAACCCAAACAGTCGCTACATGTTCAACATTCGCGCCAGCTATGCCGACGAGGCA GAAGCGATCGTGAACCAGATCATCGCGCTGGGCCTGAAAAACATTGCGGTGTTCTACCAGAACGACGGATTCGGAAAATC CGGCCTGGAAGGCGTCACCAACGCGCTCAAGCGGGCCAACCTCGCTCCGGTCGCCGTTGGAACAGTCGAACGAAACTCTC TTGACGTTGCCAAAGCGGCCGAAGCAATCAGCAAGACCAATCCGCAAGCCGTCGTCATGGTCACGCTATACAAGCCAACT GCCGCATTCGTCAAAGCCATGAAGCAACTCGGACAGTTTCCGATGTTCCTGACCCTCTCACCGGTCGGTGGCGAGGTCCT AGCGCAAGAGCTGGGCAATGATGCGCGCGGGATCGGAATTTCGCAGGTTGTTCCCTACCCCTGGAACGACACCATTCCCA TCGTCAAGGACTATCAGCGCCTTCTGGACAAGCAAAAGGACAAGTTCTCCTACTACGGCCTCGAAGGCTACATCACGGCC CGTCTGGTGGCAGAAGCACTCAAGAAGGCAGGCAAGGATCTGACCCGCGAAAAACTAGTGACCACGCTGGAAGGCATGCA GAACTTTGACCTAGGGGGTTTCAAGCTCAACTACAGCCCCAACAGCCGGCAGGGATCTCGCTATGTCGAATTGACCGTGG TGGGCGCTGGCGGCAAGGTAATCAAATAA
Upstream 100 bases:
>100_bases TGGTTTGCCGCCCCTTTCGAGCTGTAAGCTCATAGTCAGCTAACAAGCCCATTCTCCAATTTGCCACAAAGTATCGTCCA ACCATAAGGCAACGGAGACA
Downstream 100 bases:
>100_bases ACCCTTCACCATCAAAAAAGCCCGTCCATGGACGGGCTTTTTTCGTTCAGGCACGCCGCCAAGTTGTGCCTTGCGGGCTA TCGTCGAGAATGATCCCGGC
Product: extracellular ligand-binding receptor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKPLHKLLLASILALGMTQTHAEVGVTDTSITLGMSAPFTGPNGLYGMQMREAITAHFDQLNKSGGINGRKLELITIDDG YETDRTLANTKTLIQDKQVFALMGYYGSTPTTEAMNKVFGPAKVPLIGTISGAGTLREPLASNPNSRYMFNIRASYADEA EAIVNQIIALGLKNIAVFYQNDGFGKSGLEGVTNALKRANLAPVAVGTVERNSLDVAKAAEAISKTNPQAVVMVTLYKPT AAFVKAMKQLGQFPMFLTLSPVGGEVLAQELGNDARGIGISQVVPYPWNDTIPIVKDYQRLLDKQKDKFSYYGLEGYITA RLVAEALKKAGKDLTREKLVTTLEGMQNFDLGGFKLNYSPNSRQGSRYVELTVVGAGGKVIK
Sequences:
>Translated_382_residues MKPLHKLLLASILALGMTQTHAEVGVTDTSITLGMSAPFTGPNGLYGMQMREAITAHFDQLNKSGGINGRKLELITIDDG YETDRTLANTKTLIQDKQVFALMGYYGSTPTTEAMNKVFGPAKVPLIGTISGAGTLREPLASNPNSRYMFNIRASYADEA EAIVNQIIALGLKNIAVFYQNDGFGKSGLEGVTNALKRANLAPVAVGTVERNSLDVAKAAEAISKTNPQAVVMVTLYKPT AAFVKAMKQLGQFPMFLTLSPVGGEVLAQELGNDARGIGISQVVPYPWNDTIPIVKDYQRLLDKQKDKFSYYGLEGYITA RLVAEALKKAGKDLTREKLVTTLEGMQNFDLGGFKLNYSPNSRQGSRYVELTVVGAGGKVIK >Mature_382_residues MKPLHKLLLASILALGMTQTHAEVGVTDTSITLGMSAPFTGPNGLYGMQMREAITAHFDQLNKSGGINGRKLELITIDDG YETDRTLANTKTLIQDKQVFALMGYYGSTPTTEAMNKVFGPAKVPLIGTISGAGTLREPLASNPNSRYMFNIRASYADEA EAIVNQIIALGLKNIAVFYQNDGFGKSGLEGVTNALKRANLAPVAVGTVERNSLDVAKAAEAISKTNPQAVVMVTLYKPT AAFVKAMKQLGQFPMFLTLSPVGGEVLAQELGNDARGIGISQVVPYPWNDTIPIVKDYQRLLDKQKDKFSYYGLEGYITA RLVAEALKKAGKDLTREKLVTTLEGMQNFDLGGFKLNYSPNSRQGSRYVELTVVGAGGKVIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41224; Mature: 41224
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLHKLLLASILALGMTQTHAEVGVTDTSITLGMSAPFTGPNGLYGMQMREAITAHFDQ CCHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH LNKSGGINGRKLELITIDDGYETDRTLANTKTLIQDKQVFALMGYYGSTPTTEAMNKVFG HHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHCC PAKVPLIGTISGAGTLREPLASNPNSRYMFNIRASYADEAEAIVNQIIALGLKNIAVFYQ CCCCCEEEEECCCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEE NDGFGKSGLEGVTNALKRANLAPVAVGTVERNSLDVAKAAEAISKTNPQAVVMVTLYKPT CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCH AAFVKAMKQLGQFPMFLTLSPVGGEVLAQELGNDARGIGISQVVPYPWNDTIPIVKDYQR HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCHHHHHHH LLDKQKDKFSYYGLEGYITARLVAEALKKAGKDLTREKLVTTLEGMQNFDLGGFKLNYSP HHHCCCCCEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEECCC NSRQGSRYVELTVVGAGGKVIK CCCCCCEEEEEEEEECCCCCCC >Mature Secondary Structure MKPLHKLLLASILALGMTQTHAEVGVTDTSITLGMSAPFTGPNGLYGMQMREAITAHFDQ CCHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH LNKSGGINGRKLELITIDDGYETDRTLANTKTLIQDKQVFALMGYYGSTPTTEAMNKVFG HHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHCC PAKVPLIGTISGAGTLREPLASNPNSRYMFNIRASYADEAEAIVNQIIALGLKNIAVFYQ CCCCCEEEEECCCCHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEE NDGFGKSGLEGVTNALKRANLAPVAVGTVERNSLDVAKAAEAISKTNPQAVVMVTLYKPT CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCH AAFVKAMKQLGQFPMFLTLSPVGGEVLAQELGNDARGIGISQVVPYPWNDTIPIVKDYQR HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCHHHHHHH LLDKQKDKFSYYGLEGYITARLVAEALKKAGKDLTREKLVTTLEGMQNFDLGGFKLNYSP HHHCCCCCEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEECCC NSRQGSRYVELTVVGAGGKVIK CCCCCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA