Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

Click here to switch to the map view.

The map label for this gene is 71906495

Identifier: 71906495

GI number: 71906495

Start: 928886

End: 929194

Strand: Reverse

Name: 71906495

Synonym: Daro_0856

Alternate gene names: NA

Gene position: 929194-928886 (Counterclockwise)

Preceding gene: 71906536

Following gene: 71906493

Centisome position: 20.64

GC content: 55.99

Gene sequence:

>309_bases
ATGATGAGCACTGTAAAGACCATCGAAAAGATCGACGCCCGCGAAATCCGCCGCAAGCTCGGCCTTAACCAACAGCAATT
CTGGTCCACCCTGGGCGTTACCCAGAGCGGCGGTTCCCGCTATGAAAGCGGTCGCAGCATGCCGAAGCCGGTGCGCGAAC
TGCTGCGTCTGGTTCACGTTGAGCAAGTCGATATCAAGAGCATCAAGCGTGACGACTGGGAAGTTGTCGAGTATTTGAAG
TCGCAGGAACCGGAACTGTTCAAGTCCCTGAAGAAGTCGGCTCGCAGCCACGCAAAAAAAGCGGCCTGA

Upstream 100 bases:

>100_bases
TGCACAACGTCATAGTCATATATATACTTCGTAATATTACCTAAGTCATACTTCGCTAGGATGCTTGGGTAGCCTTATTA
CACTAGCGTATGGAGAATGG

Downstream 100 bases:

>100_bases
TTTTTGCCCGAACAAGGGCATCAATCGCGAAAACGGGCATTACGGGGATACAGAAACCCGGATGCCCGTTTCTTTTTCTA
TCTGTTCACCAAAAGCAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MMSTVKTIEKIDAREIRRKLGLNQQQFWSTLGVTQSGGSRYESGRSMPKPVRELLRLVHVEQVDIKSIKRDDWEVVEYLK
SQEPELFKSLKKSARSHAKKAA

Sequences:

>Translated_102_residues
MMSTVKTIEKIDAREIRRKLGLNQQQFWSTLGVTQSGGSRYESGRSMPKPVRELLRLVHVEQVDIKSIKRDDWEVVEYLK
SQEPELFKSLKKSARSHAKKAA
>Mature_102_residues
MMSTVKTIEKIDAREIRRKLGLNQQQFWSTLGVTQSGGSRYESGRSMPKPVRELLRLVHVEQVDIKSIKRDDWEVVEYLK
SQEPELFKSLKKSARSHAKKAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11800; Mature: 11800

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSTVKTIEKIDAREIRRKLGLNQQQFWSTLGVTQSGGSRYESGRSMPKPVRELLRLVHV
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
EQVDIKSIKRDDWEVVEYLKSQEPELFKSLKKSARSHAKKAA
HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMSTVKTIEKIDAREIRRKLGLNQQQFWSTLGVTQSGGSRYESGRSMPKPVRELLRLVHV
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
EQVDIKSIKRDDWEVVEYLKSQEPELFKSLKKSARSHAKKAA
HHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA