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The map label for this gene is tnpR [C]

Identifier: 71906441

GI number: 71906441

Start: 867012

End: 867701

Strand: Reverse

Name: tnpR [C]

Synonym: Daro_0802

Alternate gene names: 71906441

Gene position: 867701-867012 (Counterclockwise)

Preceding gene: 71906443

Following gene: 71906440

Centisome position: 19.28

GC content: 57.54

Gene sequence:

>690_bases
ATGACCACCACTAAGCTAGTCTCCTACCACCGCGTAAGTACCTCCAAGCAAGGCTCCAGTGGTCTAGGCCTAGAGGCCCA
GCAGGCATCTATTGAAGCCTACAGGAACCGCATAGGGGCCTCCCTGGTAGCCTCCTTCACAGAGGTGGAGTCAGGCAAGA
ACAATGAGCGCCCCGAGCTACTGAAGGCTCTACATCATGCCCAGGTAACAGGCTCTATCCTGGTCATTGCCAAGCTAGAC
CGCCTCTCCCGTAATGCTGCCTTCCTCCTGACACTGAGAGACTCAGGGGTTAAGTTCGTAGCTGCTGACATGCCAGAGGC
TAACAACCTGACAGTAGGCATCATGGCCCTAGTTGCCCAGGAGGAACGAGAAGCCATCTCCAGGCGCACCACGGAGGCTC
TACAGGCTGCCAAGGCCAGAGGCACCAAGCTGGGTAACCCTAACGGGGCTGCTGCGCTGCTGAAGGCTGGCAAGGGTAAT
GCTGCGGGTGTTGAGGCTGTGAAGGCTAAGGCAGAGGATTACGCCAAGCAAATGAGGCCTGTTATCGAGCATCTACAGGC
CCAGGGTAAGACATCGCTAGGGGCTCTGGCAGAGGCTCTGAATGGGGGCGGGTATAGGACACCTAGAGGTGGCTCCTGGC
ATAAGACTTCGGTGGGGAATCTACTAGGGAGACTCGCCCTAGCTCCCTGA

Upstream 100 bases:

>100_bases
ACCAGCAGTTCAGTGGGCACTGTTCACAGCTCTCATTGCATGGTATAAATCCACCTAACGTCCGTTAGTCAATTCTATAC
CCACCTCCAGGGAGTCCTCC

Downstream 100 bases:

>100_bases
TTGTTTTTCCGTAATACGAACCATTATTATTTAGTCTCTATCTCCCCTCCCCTATTTTTGCGGACCTCTTCAGAGCCTCA
ACCGGGGACCCGTATAGAAT

Product: resolvase, N-terminal

Products: NA

Alternate protein names: Resolvase Domain Protein; Site-Specific Recombinase; Resolvase; Resolvase-Like Serine Recombinase; Resolvase-Like Protein; Resolvase Family Protein; Resolvase Domain; DNA Invertase; Site-Specific Recombinase For Integration And Excision; Resolvase Family Site-Specific Recombinase; Resolvase N-Terminal; Phage Resolvase/Recombinase For Integration And Excision; Y4cG Protein; DNA-Invertase; Resolvase N Terminal Domain Family; Serine Recombinase

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MTTTKLVSYHRVSTSKQGSSGLGLEAQQASIEAYRNRIGASLVASFTEVESGKNNERPELLKALHHAQVTGSILVIAKLD
RLSRNAAFLLTLRDSGVKFVAADMPEANNLTVGIMALVAQEEREAISRRTTEALQAAKARGTKLGNPNGAAALLKAGKGN
AAGVEAVKAKAEDYAKQMRPVIEHLQAQGKTSLGALAEALNGGGYRTPRGGSWHKTSVGNLLGRLALAP

Sequences:

>Translated_229_residues
MTTTKLVSYHRVSTSKQGSSGLGLEAQQASIEAYRNRIGASLVASFTEVESGKNNERPELLKALHHAQVTGSILVIAKLD
RLSRNAAFLLTLRDSGVKFVAADMPEANNLTVGIMALVAQEEREAISRRTTEALQAAKARGTKLGNPNGAAALLKAGKGN
AAGVEAVKAKAEDYAKQMRPVIEHLQAQGKTSLGALAEALNGGGYRTPRGGSWHKTSVGNLLGRLALAP
>Mature_228_residues
TTTKLVSYHRVSTSKQGSSGLGLEAQQASIEAYRNRIGASLVASFTEVESGKNNERPELLKALHHAQVTGSILVIAKLDR
LSRNAAFLLTLRDSGVKFVAADMPEANNLTVGIMALVAQEEREAISRRTTEALQAAKARGTKLGNPNGAAALLKAGKGNA
AGVEAVKAKAEDYAKQMRPVIEHLQAQGKTSLGALAEALNGGGYRTPRGGSWHKTSVGNLLGRLALAP

Specific function: This Protein Catalyzes The Site-Specific Recombination Of The Transposon And Also Regulates Its Frequency Of Transposition. [C]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24078; Mature: 23947

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTKLVSYHRVSTSKQGSSGLGLEAQQASIEAYRNRIGASLVASFTEVESGKNNERPEL
CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LKALHHAQVTGSILVIAKLDRLSRNAAFLLTLRDSGVKFVAADMPEANNLTVGIMALVAQ
HHHHHHHHHCCCEEEEEEHHHHCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHH
EEREAISRRTTEALQAAKARGTKLGNPNGAAALLKAGKGNAAGVEAVKAKAEDYAKQMRP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH
VIEHLQAQGKTSLGALAEALNGGGYRTPRGGSWHKTSVGNLLGRLALAP
HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTTKLVSYHRVSTSKQGSSGLGLEAQQASIEAYRNRIGASLVASFTEVESGKNNERPEL
CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LKALHHAQVTGSILVIAKLDRLSRNAAFLLTLRDSGVKFVAADMPEANNLTVGIMALVAQ
HHHHHHHHHCCCEEEEEEHHHHCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHH
EEREAISRRTTEALQAAKARGTKLGNPNGAAALLKAGKGNAAGVEAVKAKAEDYAKQMRP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH
VIEHLQAQGKTSLGALAEALNGGGYRTPRGGSWHKTSVGNLLGRLALAP
HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA