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The map label for this gene is fliF [H]

Identifier: 71906412

GI number: 71906412

Start: 839925

End: 841679

Strand: Reverse

Name: fliF [H]

Synonym: Daro_0773

Alternate gene names: 71906412

Gene position: 841679-839925 (Counterclockwise)

Preceding gene: 71906416

Following gene: 71906411

Centisome position: 18.7

GC content: 57.21

Gene sequence:

>1755_bases
ATGGCAGCAACGACTGAGACGACAGCAGGGACTGCACCGGAACAAAACCCGGTGGACCGTCTGCGCGAGGCATTCAACCG
GCTCGGCAGTCAGCAGAAGATCGTCTTCATGGTCGCCATTGCCGCCCTTATCGCAATTATTGTGGGGGCAATCCTGTGGA
GCCGACAGCCTGACTGGAAGGTGCTTTTCTCGAATCTGACGGAAAAAGACGGGGGTTCCATTGCGGCCATTCTCGAGCAG
CAAAACATCCCTCACCGCTACAGTAACAGCGGCGCCTTGCTTGTGCCATCCGACCGCGTCCATGAAGTGCGCCTGAAGCT
TGCTTCACAAGGCCTGCCACGCGGTGGCATGGTCGGTTTCGAATTGATGGAAAACCAGAAATTCGGGGTTAGCCAGTTTG
CCGAACAGGTGAACTACCAACGCGGTCTAGAGGGCGAACTGGCCAGAACCATCCAGTCGATCGGCTCAGTGCAATCCGCC
CGCGTTCATCTGGCCATTCCCAAACCATCGGTATTCGTCCGCGAGGAGCAAAAACCGACGGCATCCGTGATGCTCAACCT
CTATCCGGGCCGTACGCTCGATGGTGGTCAGATTGCCGGCATTACGCATCTGGTGTCATCCAGCGTCCCCCAACTGCCGG
CATCGAATGTGACGGTGCTCGACCAGAGTGGCGCCTTGCTGTCACAACTGAAGAGCAAGCTGACCGAAGCGGGCCTGGAC
CCGACGCAGATCAAATATGTTCACGACGTAGAAAACAGCATTATCAAGCGCATTGATGAAATCCTCAGCCCGCTACTGGG
CGCCGACAATTTCAAGGTGCAGGTTGCTGCTGATATCGACTTTTCGCAAACCGAGCAGACCGCCGAAAGCTACCGTCCAA
ACAACACGCCGGAAAGCACCAGCATCCGCAGTCAGCAAAACAACGAAACTGCCAACGTCAATCAGGCCGCCGGCGGCGTA
CCGGGCGCGCTAACCAACCAGCCACCGGTGCCAGCCACAGCGCCACTGACCCAGCCGGCGACCGGGACGACTCCGGGACA
GCCGGCAAAGCCAGGAGAGCCCCAGGGCAAAATCGACGCTGCGGGGGTCACCGCACCGCTCAACGCTGCAGGTCAACCGA
TCAGCACCAGCAAAAATGCCACGATCAACTATGAACTGGACAAGACCATCCGCCATACCAGGCAGGGGATGGGTAACATC
CGGCGCTTGTCGGCTGCCGTGGTCGTCAATCATCGCAAGGACGTCGACAAGACAGGCAAACCGCTGACCAAGGCAATTCC
CGACGCGGAGATGAAGCAAATCAATGAACTGGTTCGCGAAGCGATGGGGTTCACCAAGGAACGAGGGGATACGCTGTCGG
TGGCCAACGCCCCCTTCACCGCCATCGACAAGAGCGAAAACGAGTTGCCGATCTGGAAAGACCCGGAGAACGTCTCTTAT
ATCAAGGATATTCTCAAGTATCTGCTGATCGCGGCCATCATTGCCTTCCTCTACATCAAGCTTATCCAGCCCTCGTTGAA
AACGATGTTCCCGGCACGCCATGAAGGCGAGAAACATGCTGGAGATGGAACCGGCCCAGGCGGCATATTCGGAGGAATAA
CCGGCAGCGCGGAAGAGGCTGGCGAAGATGGTTCAACCCAGGTGACTATCGACAACTACGCCATCAAGATTCAGAAGGCT
CGCGAATTCGCCGAGAAAGACTCAAAGGCGGTAGCCAACATCATCAAGGATTGGATGGGCGTCAATGGCAACTAG

Upstream 100 bases:

>100_bases
GATAGGGGGAATTCAGCGCCGGTAATAGTAGAATATTTCTAGGAAAATTTGGCTTCTCAATTGATTCTTCTTCTGTTTAC
CGTAATTCGACCGAGCATTA

Downstream 100 bases:

>100_bases
CCCTGAAGAAGGCCTCGAAAAAAGCGCCACACTGCTTATCGCACTCGGCGCCGATCACGCGGCAGAAGTTCTCAAGAACC
TCGGCCCACGCGAGGTGCAG

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MAATTETTAGTAPEQNPVDRLREAFNRLGSQQKIVFMVAIAALIAIIVGAILWSRQPDWKVLFSNLTEKDGGSIAAILEQ
QNIPHRYSNSGALLVPSDRVHEVRLKLASQGLPRGGMVGFELMENQKFGVSQFAEQVNYQRGLEGELARTIQSIGSVQSA
RVHLAIPKPSVFVREEQKPTASVMLNLYPGRTLDGGQIAGITHLVSSSVPQLPASNVTVLDQSGALLSQLKSKLTEAGLD
PTQIKYVHDVENSIIKRIDEILSPLLGADNFKVQVAADIDFSQTEQTAESYRPNNTPESTSIRSQQNNETANVNQAAGGV
PGALTNQPPVPATAPLTQPATGTTPGQPAKPGEPQGKIDAAGVTAPLNAAGQPISTSKNATINYELDKTIRHTRQGMGNI
RRLSAAVVVNHRKDVDKTGKPLTKAIPDAEMKQINELVREAMGFTKERGDTLSVANAPFTAIDKSENELPIWKDPENVSY
IKDILKYLLIAAIIAFLYIKLIQPSLKTMFPARHEGEKHAGDGTGPGGIFGGITGSAEEAGEDGSTQVTIDNYAIKIQKA
REFAEKDSKAVANIIKDWMGVNGN

Sequences:

>Translated_584_residues
MAATTETTAGTAPEQNPVDRLREAFNRLGSQQKIVFMVAIAALIAIIVGAILWSRQPDWKVLFSNLTEKDGGSIAAILEQ
QNIPHRYSNSGALLVPSDRVHEVRLKLASQGLPRGGMVGFELMENQKFGVSQFAEQVNYQRGLEGELARTIQSIGSVQSA
RVHLAIPKPSVFVREEQKPTASVMLNLYPGRTLDGGQIAGITHLVSSSVPQLPASNVTVLDQSGALLSQLKSKLTEAGLD
PTQIKYVHDVENSIIKRIDEILSPLLGADNFKVQVAADIDFSQTEQTAESYRPNNTPESTSIRSQQNNETANVNQAAGGV
PGALTNQPPVPATAPLTQPATGTTPGQPAKPGEPQGKIDAAGVTAPLNAAGQPISTSKNATINYELDKTIRHTRQGMGNI
RRLSAAVVVNHRKDVDKTGKPLTKAIPDAEMKQINELVREAMGFTKERGDTLSVANAPFTAIDKSENELPIWKDPENVSY
IKDILKYLLIAAIIAFLYIKLIQPSLKTMFPARHEGEKHAGDGTGPGGIFGGITGSAEEAGEDGSTQVTIDNYAIKIQKA
REFAEKDSKAVANIIKDWMGVNGN
>Mature_583_residues
AATTETTAGTAPEQNPVDRLREAFNRLGSQQKIVFMVAIAALIAIIVGAILWSRQPDWKVLFSNLTEKDGGSIAAILEQQ
NIPHRYSNSGALLVPSDRVHEVRLKLASQGLPRGGMVGFELMENQKFGVSQFAEQVNYQRGLEGELARTIQSIGSVQSAR
VHLAIPKPSVFVREEQKPTASVMLNLYPGRTLDGGQIAGITHLVSSSVPQLPASNVTVLDQSGALLSQLKSKLTEAGLDP
TQIKYVHDVENSIIKRIDEILSPLLGADNFKVQVAADIDFSQTEQTAESYRPNNTPESTSIRSQQNNETANVNQAAGGVP
GALTNQPPVPATAPLTQPATGTTPGQPAKPGEPQGKIDAAGVTAPLNAAGQPISTSKNATINYELDKTIRHTRQGMGNIR
RLSAAVVVNHRKDVDKTGKPLTKAIPDAEMKQINELVREAMGFTKERGDTLSVANAPFTAIDKSENELPIWKDPENVSYI
KDILKYLLIAAIIAFLYIKLIQPSLKTMFPARHEGEKHAGDGTGPGGIFGGITGSAEEAGEDGSTQVTIDNYAIKIQKAR
EFAEKDSKAVANIIKDWMGVNGN

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=572, Percent_Identity=44.0559440559441, Blast_Score=446, Evalue=1e-126,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 62735; Mature: 62604

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATTETTAGTAPEQNPVDRLREAFNRLGSQQKIVFMVAIAALIAIIVGAILWSRQPDWK
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
VLFSNLTEKDGGSIAAILEQQNIPHRYSNSGALLVPSDRVHEVRLKLASQGLPRGGMVGF
HHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCHH
ELMENQKFGVSQFAEQVNYQRGLEGELARTIQSIGSVQSARVHLAIPKPSVFVREEQKPT
HHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCC
ASVMLNLYPGRTLDGGQIAGITHLVSSSVPQLPASNVTVLDQSGALLSQLKSKLTEAGLD
CCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCC
PTQIKYVHDVENSIIKRIDEILSPLLGADNFKVQVAADIDFSQTEQTAESYRPNNTPEST
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCC
SIRSQQNNETANVNQAAGGVPGALTNQPPVPATAPLTQPATGTTPGQPAKPGEPQGKIDA
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC
AGVTAPLNAAGQPISTSKNATINYELDKTIRHTRQGMGNIRRLSAAVVVNHRKDVDKTGK
CCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PLTKAIPDAEMKQINELVREAMGFTKERGDTLSVANAPFTAIDKSENELPIWKDPENVSY
CHHHHCCCHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCEEECCCCCCCCCCCCCCCHHH
IKDILKYLLIAAIIAFLYIKLIQPSLKTMFPARHEGEKHAGDGTGPGGIFGGITGSAEEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC
GEDGSTQVTIDNYAIKIQKAREFAEKDSKAVANIIKDWMGVNGN
CCCCCEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AATTETTAGTAPEQNPVDRLREAFNRLGSQQKIVFMVAIAALIAIIVGAILWSRQPDWK
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
VLFSNLTEKDGGSIAAILEQQNIPHRYSNSGALLVPSDRVHEVRLKLASQGLPRGGMVGF
HHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCHH
ELMENQKFGVSQFAEQVNYQRGLEGELARTIQSIGSVQSARVHLAIPKPSVFVREEQKPT
HHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCC
ASVMLNLYPGRTLDGGQIAGITHLVSSSVPQLPASNVTVLDQSGALLSQLKSKLTEAGLD
CCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCC
PTQIKYVHDVENSIIKRIDEILSPLLGADNFKVQVAADIDFSQTEQTAESYRPNNTPEST
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCC
SIRSQQNNETANVNQAAGGVPGALTNQPPVPATAPLTQPATGTTPGQPAKPGEPQGKIDA
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC
AGVTAPLNAAGQPISTSKNATINYELDKTIRHTRQGMGNIRRLSAAVVVNHRKDVDKTGK
CCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PLTKAIPDAEMKQINELVREAMGFTKERGDTLSVANAPFTAIDKSENELPIWKDPENVSY
CHHHHCCCHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCEEECCCCCCCCCCCCCCCHHH
IKDILKYLLIAAIIAFLYIKLIQPSLKTMFPARHEGEKHAGDGTGPGGIFGGITGSAEEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC
GEDGSTQVTIDNYAIKIQKAREFAEKDSKAVANIIKDWMGVNGN
CCCCCEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2544561; 11677609; 1551848 [H]