| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906360
Identifier: 71906360
GI number: 71906360
Start: 789775
End: 790248
Strand: Reverse
Name: 71906360
Synonym: Daro_0721
Alternate gene names: NA
Gene position: 790248-789775 (Counterclockwise)
Preceding gene: 71906385
Following gene: 71906348
Centisome position: 17.56
GC content: 53.38
Gene sequence:
>474_bases TTGCCTAGGCACGTCTGTAACGCCTGCGGCCACATTCACTACGAAAACCCCCGACTGATCGTCGGCTGCGTCGCCGAGTG GGAGGACCGCATATTACTTTGCCGACGGGCAATTGAGCCTCGCCACGGTTTTTGGACATTACCAGCAGGCTTCATGGAGA ACGGAGAAACCACTACGCAAGCTGCAATTCGTGAAACCCACGAAGAGGCCGGTGCAGATATTTTTGTAGATGCGCCATTT GCCCTCATCAGCATTGCCCACATCAATCAGGTCCATCTCTTTTATCGGGGAAAACTAAGGGGATCGAACTACGCAGCCGG AGAAGAAAGCCTGGAAGTCTACCTTTTCACCCCCGAGGAAATTCCTTGGGAAAATCTAGCGTTTCGCAGCGTCACACTGT GCCTGGAACATTACCTGGCGGATCGCAAAGACGGCAGATTCGGTTTTCACGAAGCTCAACTCGGGCCGCTTTAG
Upstream 100 bases:
>100_bases GATACACTGAAAACCATCGTTTTAAGCCGAGTCCACCGTGATCCAGTACTGCAATCATTGCGGCTCAAGTGTTTCCTTTA TAGTTCCAAGCGGAGACGCT
Downstream 100 bases:
>100_bases CCGATTATTATTCAGCTAGCCGATACTCGACAGGCAAGCTAATCCCGAACTTTCGGCCCTGCATTCCTACCGGCAAGGGT GCCTGTGTTACCGCCTCCGC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; Nudix Hydrolase; Hydrolase NUDIX Family; MutT/NUDIX Family Protein; Nudix Hydrolase MutT Family; NUDIX Family Hydrolase; NUDIX Family NudH Subfamily Hydrolase; Related Nudix Hydrolase; Mutator MutT Protein; Nudix/Mutt Family Protein; Hydrolase NUDIX Family Protein
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MPRHVCNACGHIHYENPRLIVGCVAEWEDRILLCRRAIEPRHGFWTLPAGFMENGETTTQAAIRETHEEAGADIFVDAPF ALISIAHINQVHLFYRGKLRGSNYAAGEESLEVYLFTPEEIPWENLAFRSVTLCLEHYLADRKDGRFGFHEAQLGPL
Sequences:
>Translated_157_residues MPRHVCNACGHIHYENPRLIVGCVAEWEDRILLCRRAIEPRHGFWTLPAGFMENGETTTQAAIRETHEEAGADIFVDAPF ALISIAHINQVHLFYRGKLRGSNYAAGEESLEVYLFTPEEIPWENLAFRSVTLCLEHYLADRKDGRFGFHEAQLGPL >Mature_156_residues PRHVCNACGHIHYENPRLIVGCVAEWEDRILLCRRAIEPRHGFWTLPAGFMENGETTTQAAIRETHEEAGADIFVDAPFA LISIAHINQVHLFYRGKLRGSNYAAGEESLEVYLFTPEEIPWENLAFRSVTLCLEHYLADRKDGRFGFHEAQLGPL
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17877; Mature: 17746
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRHVCNACGHIHYENPRLIVGCVAEWEDRILLCRRAIEPRHGFWTLPAGFMENGETTTQ CCCHHHHHCCCEEECCCCEEEEEECCHHHHHHHHHHHCCCCCCEEECCHHHHCCCCHHHH AAIRETHEEAGADIFVDAPFALISIAHINQVHLFYRGKLRGSNYAAGEESLEVYLFTPEE HHHHHHHHHCCCEEEEECCHHHEEHHHCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCC IPWENLAFRSVTLCLEHYLADRKDGRFGFHEAQLGPL CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PRHVCNACGHIHYENPRLIVGCVAEWEDRILLCRRAIEPRHGFWTLPAGFMENGETTTQ CCHHHHHCCCEEECCCCEEEEEECCHHHHHHHHHHHCCCCCCEEECCHHHHCCCCHHHH AAIRETHEEAGADIFVDAPFALISIAHINQVHLFYRGKLRGSNYAAGEESLEVYLFTPEE HHHHHHHHHCCCEEEEECCHHHEEHHHCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCC IPWENLAFRSVTLCLEHYLADRKDGRFGFHEAQLGPL CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA