| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906262
Identifier: 71906262
GI number: 71906262
Start: 688223
End: 689062
Strand: Reverse
Name: 71906262
Synonym: Daro_0622
Alternate gene names: NA
Gene position: 689062-688223 (Counterclockwise)
Preceding gene: 71906263
Following gene: 71906261
Centisome position: 15.31
GC content: 55.24
Gene sequence:
>840_bases ATGTCAGGCAGCAGCGTTCATTTTCGCATTCTTGAAGACATCGCCCGAGATCTCTCGGGCGATGTCAATTTCCCCACATG CATGGATGCAGCGATTCTTGTTCGCAACACCTTGAGGAACCCTGACGCCGACCTGGAGCAAGTCATTCAGGCAATTGGTG TCGAGCCCCTGATTGCCAGCAAACTGCTAAGACTCGCCAACTCGGTTAGCCACAACCCTAGAGGGGAGCGCATTTCAGAC CTGGGAGCCGCAATTACCCGATTGGGTTTCGATATTGTCCGAACGACATCCCTGGCGGTCGCGATGGACCAGATGTTGAA ATCCAAGAACCTGTCCGCTTACGACCGAATTTCGCAACAGACTTGGGAAAATTCAGTGCAGGTCGCCGCAATCGCCCGGG TACTGGCTCGTCATCTGGGCCGCATTCATCCTGATGAAGCCATGCTGGCCGGACTGGTCCATAACATTGGCGTTTTTTAC TTGATGTATCGTGCCGCTGAGTATCCGGAATATCGTGATAACGAAGCAGCAATGCTCGAACTCCTCGCCGGATGGCATGA AGGTATTGGCGAAAGCCTGCTGCACATTCTTGGCCTACCCGACTCGATCACCGATGCGGTTCGCGATCAGAATCAGTTGC GCAGCATCGAAACGCCCTGCTCGATCAGTGACGTGCTCCATTTCGCCAAATTACTGGCTGACACCCAACCGGCTTGGCAA ACGGCCAACCTCGATGCCCAGCAAACCGAGGCGCTTGCGGCTGAACGCTCACGCTATGCCGATCTGCTGCAAGAGGCCGA GGAAGACATCCTCGAACTACGCGCCGCCCTTTCTGCCTGA
Upstream 100 bases:
>100_bases GGCATTGTCGGCATGATTTCAATCGGCGACTTGGTCAAGGAAACCATCAGCGATCAGAAATTCCTTATCGCCCAATTGGA ACATTACATTGCAGGTTGAA
Downstream 100 bases:
>100_bases ACCAGCGGACTTTCTGGCAGTCTGACATTCAGCCCTTGCCGGATTTTCTGTAAGGTTTTCGGGCGAATGCCGACTATTAG GCATTCCTACAGAAAGGAAA
Product: putative signal transduction protein
Products: NA
Alternate protein names: Metal Dependent Phosphohydrolase; Metal-Dependent Phosphohydrolase; HD Domain-Containing Protein; Metal Dependent Phosphohydrolase Superfamily Protein; Metal-Dependent Hydrolase HDOD; Transcriptional Regulator Fis Family; HDOD Domain Family; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSGSSVHFRILEDIARDLSGDVNFPTCMDAAILVRNTLRNPDADLEQVIQAIGVEPLIASKLLRLANSVSHNPRGERISD LGAAITRLGFDIVRTTSLAVAMDQMLKSKNLSAYDRISQQTWENSVQVAAIARVLARHLGRIHPDEAMLAGLVHNIGVFY LMYRAAEYPEYRDNEAAMLELLAGWHEGIGESLLHILGLPDSITDAVRDQNQLRSIETPCSISDVLHFAKLLADTQPAWQ TANLDAQQTEALAAERSRYADLLQEAEEDILELRAALSA
Sequences:
>Translated_279_residues MSGSSVHFRILEDIARDLSGDVNFPTCMDAAILVRNTLRNPDADLEQVIQAIGVEPLIASKLLRLANSVSHNPRGERISD LGAAITRLGFDIVRTTSLAVAMDQMLKSKNLSAYDRISQQTWENSVQVAAIARVLARHLGRIHPDEAMLAGLVHNIGVFY LMYRAAEYPEYRDNEAAMLELLAGWHEGIGESLLHILGLPDSITDAVRDQNQLRSIETPCSISDVLHFAKLLADTQPAWQ TANLDAQQTEALAAERSRYADLLQEAEEDILELRAALSA >Mature_278_residues SGSSVHFRILEDIARDLSGDVNFPTCMDAAILVRNTLRNPDADLEQVIQAIGVEPLIASKLLRLANSVSHNPRGERISDL GAAITRLGFDIVRTTSLAVAMDQMLKSKNLSAYDRISQQTWENSVQVAAIARVLARHLGRIHPDEAMLAGLVHNIGVFYL MYRAAEYPEYRDNEAAMLELLAGWHEGIGESLLHILGLPDSITDAVRDQNQLRSIETPCSISDVLHFAKLLADTQPAWQT ANLDAQQTEALAAERSRYADLLQEAEEDILELRAALSA
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30749; Mature: 30618
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSSVHFRILEDIARDLSGDVNFPTCMDAAILVRNTLRNPDADLEQVIQAIGVEPLIAS CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHH KLLRLANSVSHNPRGERISDLGAAITRLGFDIVRTTSLAVAMDQMLKSKNLSAYDRISQQ HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TWENSVQVAAIARVLARHLGRIHPDEAMLAGLVHNIGVFYLMYRAAEYPEYRDNEAAMLE HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LLAGWHEGIGESLLHILGLPDSITDAVRDQNQLRSIETPCSISDVLHFAKLLADTQPAWQ HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC TANLDAQQTEALAAERSRYADLLQEAEEDILELRAALSA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGSSVHFRILEDIARDLSGDVNFPTCMDAAILVRNTLRNPDADLEQVIQAIGVEPLIAS CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHH KLLRLANSVSHNPRGERISDLGAAITRLGFDIVRTTSLAVAMDQMLKSKNLSAYDRISQQ HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TWENSVQVAAIARVLARHLGRIHPDEAMLAGLVHNIGVFYLMYRAAEYPEYRDNEAAMLE HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LLAGWHEGIGESLLHILGLPDSITDAVRDQNQLRSIETPCSISDVLHFAKLLADTQPAWQ HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC TANLDAQQTEALAAERSRYADLLQEAEEDILELRAALSA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA