| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is 71905942
Identifier: 71905942
GI number: 71905942
Start: 342961
End: 343437
Strand: Reverse
Name: 71905942
Synonym: Daro_0300
Alternate gene names: NA
Gene position: 343437-342961 (Counterclockwise)
Preceding gene: 71905943
Following gene: 71905941
Centisome position: 7.63
GC content: 60.17
Gene sequence:
>477_bases ATGACTCGTCCCTTCAAGGTTCTCGGCATCCAGCAAATCGCCATCGGCGGTCCGTCCAAGGAAAAACTGCGCACCCTGTG GGTCGAGAAATTCGGTCTGGAAATCACCAGCACCTTCGTTTCCGAGCGCGAAAATGTCGATGAAGACATCTGCGCCATGG GCACCGGCCCGTTCAAGGTCGAAGTCGACCTGATGCAGCCACTCGATCCGGAAAAGAAGCCGGCCGTGCATACCACGCCG CTCAACCACGTCGGTCTGTGGATCGACGACCTGCCGAAGGCTGTCGAATGGCTGTCGGCCAACGGTGTTCGTTTTGCTCC GGGCGGCATTCGCAAGGGCGCGGCTGGTTTCGACATCACCTTCCTGCACCCGAAGGGCAATGACGAATTCCCGATCGGCG GCGAAGGCGTGTTGATCGAACTGGTGCAGGCGCCGCCGGAAGTCGTTGCGGCCTTCGCCAAGCTGGCGGCTCAATAA
Upstream 100 bases:
>100_bases CCGATGATCCTGATCGGGGTGGCCATGGTGGTCTTTGCCTACCGGAAGAAATCCCTATAATTATGGATTACGTTATTCAA TCCAACACAGGAATCCAGTC
Downstream 100 bases:
>100_bases GCCTTTCATGGCTGACATCCCCGAGGAAGATCTCGAGGAAACCCGGGCGGCGCTCGCTCCAACGCTGGCAGCGACTGCCG CCATCCTGCCCTGGGTCAGC
Product: lactoylglutathione lyase
Products: glutathione; methylglyoxal
Alternate protein names: Methylmalonyl-CoA Epimerase; Glyoxalase/Bleomycin Resistance Protein/Dioxygenase
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTRPFKVLGIQQIAIGGPSKEKLRTLWVEKFGLEITSTFVSERENVDEDICAMGTGPFKVEVDLMQPLDPEKKPAVHTTP LNHVGLWIDDLPKAVEWLSANGVRFAPGGIRKGAAGFDITFLHPKGNDEFPIGGEGVLIELVQAPPEVVAAFAKLAAQ
Sequences:
>Translated_158_residues MTRPFKVLGIQQIAIGGPSKEKLRTLWVEKFGLEITSTFVSERENVDEDICAMGTGPFKVEVDLMQPLDPEKKPAVHTTP LNHVGLWIDDLPKAVEWLSANGVRFAPGGIRKGAAGFDITFLHPKGNDEFPIGGEGVLIELVQAPPEVVAAFAKLAAQ >Mature_157_residues TRPFKVLGIQQIAIGGPSKEKLRTLWVEKFGLEITSTFVSERENVDEDICAMGTGPFKVEVDLMQPLDPEKKPAVHTTPL NHVGLWIDDLPKAVEWLSANGVRFAPGGIRKGAAGFDITFLHPKGNDEFPIGGEGVLIELVQAPPEVVAAFAKLAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.4.1.5
Molecular weight: Translated: 17128; Mature: 16997
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPFKVLGIQQIAIGGPSKEKLRTLWVEKFGLEITSTFVSERENVDEDICAMGTGPFKV CCCCEEEECEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCCCCEEE EVDLMQPLDPEKKPAVHTTPLNHVGLWIDDLPKAVEWLSANGVRFAPGGIRKGAAGFDIT EEEECCCCCCCCCCCEEECCCCHHCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEE FLHPKGNDEFPIGGEGVLIELVQAPPEVVAAFAKLAAQ EECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCC >Mature Secondary Structure TRPFKVLGIQQIAIGGPSKEKLRTLWVEKFGLEITSTFVSERENVDEDICAMGTGPFKV CCCEEEECEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCCCCEEE EVDLMQPLDPEKKPAVHTTPLNHVGLWIDDLPKAVEWLSANGVRFAPGGIRKGAAGFDIT EEEECCCCCCCCCCCEEECCCCHHCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEE FLHPKGNDEFPIGGEGVLIELVQAPPEVVAAFAKLAAQ EECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: (R)-S-lactoylglutathione
Specific reaction: (R)-S-lactoylglutathione = glutathione + methylglyoxal
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA