| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71905941
Identifier: 71905941
GI number: 71905941
Start: 342201
End: 342953
Strand: Reverse
Name: 71905941
Synonym: Daro_0299
Alternate gene names: NA
Gene position: 342953-342201 (Counterclockwise)
Preceding gene: 71905942
Following gene: 71905934
Centisome position: 7.62
GC content: 64.81
Gene sequence:
>753_bases ATGGCTGACATCCCCGAGGAAGATCTCGAGGAAACCCGGGCGGCGCTCGCTCCAACGCTGGCAGCGACTGCCGCCATCCT GCCCTGGGTCAGCAAACCCCGGCAATTACGCTTCGATGCAAAGCTCAATGAGCGCTGGGTCGCTGCCGGAAAGCGTCTGG CTGCCGCGTGGTCAGACCGTCACGGCGCGGGGGCTGAAGACATCCGGCCCGCCATCTTCAGTCTCTACGCCATCGCCATT GAAGCTGCCGATGGCGACTCTCTCCGACTGGGCGAAGCCCTGGCCAGTGCGGCCGACCGCCTGGAGAATGCGAGCCCGTC GCCGCGCCTGATCGCTGCCATCACCGGGGCCATCGAATGCCTTGGCGAAGCGGACGGTCTGGAGCATGAGGCCTTTGCCG ACCGCGCCCAGCATTTCTCAATGCGCCTCGAAGCGGCAGCCTCAGCGCCCGACAACGCCGAACGCTCGGCCGTTCTCGAC CGTCTTTTTGTCGACGAGGCTTGCGAGCAGATCGAGTTGATGCGCGATGCACTGGCCGCCCTGCCGCCTGATGCCTATGC GCTGACGACCGAAGCGATGAAACTGGCGCAGCAGGCCGAATTGCTGGAACTCTGGGGCATCATGCATCTTGCCCGGCATT TGACCGACTATATTGGCCGCAACGCGGCCGAGCTGGACTCAGATGAGCACCGGGAGGAAATTGAGCGGCTGGTGCACGCG CTAGCCACGGCAATCGCTGCCGTCGCGGCCTAG
Upstream 100 bases:
>100_bases GAATTCCCGATCGGCGGCGAAGGCGTGTTGATCGAACTGGTGCAGGCGCCGCCGGAAGTCGTTGCGGCCTTCGCCAAGCT GGCGGCTCAATAAGCCTTTC
Downstream 100 bases:
>100_bases ACCGGCCGAAAAACACTCAAGGCGAGCCGTCGGCCATCACTCAGATCGGCAACCTCGGCGGTTATCTCGACCGGAAGCTT GCGGCCGTCGCTGTGCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MADIPEEDLEETRAALAPTLAATAAILPWVSKPRQLRFDAKLNERWVAAGKRLAAAWSDRHGAGAEDIRPAIFSLYAIAI EAADGDSLRLGEALASAADRLENASPSPRLIAAITGAIECLGEADGLEHEAFADRAQHFSMRLEAAASAPDNAERSAVLD RLFVDEACEQIELMRDALAALPPDAYALTTEAMKLAQQAELLELWGIMHLARHLTDYIGRNAAELDSDEHREEIERLVHA LATAIAAVAA
Sequences:
>Translated_250_residues MADIPEEDLEETRAALAPTLAATAAILPWVSKPRQLRFDAKLNERWVAAGKRLAAAWSDRHGAGAEDIRPAIFSLYAIAI EAADGDSLRLGEALASAADRLENASPSPRLIAAITGAIECLGEADGLEHEAFADRAQHFSMRLEAAASAPDNAERSAVLD RLFVDEACEQIELMRDALAALPPDAYALTTEAMKLAQQAELLELWGIMHLARHLTDYIGRNAAELDSDEHREEIERLVHA LATAIAAVAA >Mature_249_residues ADIPEEDLEETRAALAPTLAATAAILPWVSKPRQLRFDAKLNERWVAAGKRLAAAWSDRHGAGAEDIRPAIFSLYAIAIE AADGDSLRLGEALASAADRLENASPSPRLIAAITGAIECLGEADGLEHEAFADRAQHFSMRLEAAASAPDNAERSAVLDR LFVDEACEQIELMRDALAALPPDAYALTTEAMKLAQQAELLELWGIMHLARHLTDYIGRNAAELDSDEHREEIERLVHAL ATAIAAVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26935; Mature: 26803
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIPEEDLEETRAALAPTLAATAAILPWVSKPRQLRFDAKLNERWVAAGKRLAAAWSDR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHCCC HGAGAEDIRPAIFSLYAIAIEAADGDSLRLGEALASAADRLENASPSPRLIAAITGAIEC CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LGEADGLEHEAFADRAQHFSMRLEAAASAPDNAERSAVLDRLFVDEACEQIELMRDALAA HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPPDAYALTTEAMKLAQQAELLELWGIMHLARHLTDYIGRNAAELDSDEHREEIERLVHA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHH LATAIAAVAA HHHHHHHHCC >Mature Secondary Structure ADIPEEDLEETRAALAPTLAATAAILPWVSKPRQLRFDAKLNERWVAAGKRLAAAWSDR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHCCC HGAGAEDIRPAIFSLYAIAIEAADGDSLRLGEALASAADRLENASPSPRLIAAITGAIEC CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LGEADGLEHEAFADRAQHFSMRLEAAASAPDNAERSAVLDRLFVDEACEQIELMRDALAA HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPPDAYALTTEAMKLAQQAELLELWGIMHLARHLTDYIGRNAAELDSDEHREEIERLVHA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHH LATAIAAVAA HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA