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The map label for this gene is oruR [H]

Identifier: 71905884

GI number: 71905884

Start: 272596

End: 273663

Strand: Reverse

Name: oruR [H]

Synonym: Daro_0242

Alternate gene names: 71905884

Gene position: 273663-272596 (Counterclockwise)

Preceding gene: 71905887

Following gene: 71905883

Centisome position: 6.08

GC content: 64.98

Gene sequence:

>1068_bases
ATGGTGCACCGCACGATCGGAAATTCGTCACCTCGCTCGCAAGCCACTGTCGCAATGGGATTTGTGACCGGCATGCTGGC
TGGCATAGCGCATCGACAAATCGACCTGTCGCCACTGCTGGCGGCACTGGAGATTGATATTGCAGACACAGCCAGCCGCA
TCCCGATCGACCGCTATGCCGAGCTCTACAACCGGCTGAACCGGCAACTGGACGACGAGGCCTTTGCCCTTTTCGCCCAG
CCGATGCGCGTCGGCAGCTTTGAATTTCTGTGCCGAGGCTGTCTGAGTGCCGCAACGCTGGCCGATGCGCTGACTCGCGC
CGCCCGTTTCCTGCATGTCGTGTTGCCTGACCTGGCGGTCAGCGTTCGTCGTTCGCATGGCCATGCCGAACTGGTCATCG
CCGAAACCCGGCGGCTTGCCGACAATCCGGAAGACCCCGGCCGCATCTTCGCCTTCGAGTGGCTACTCCGCCTGCTGCAT
GGCCTGTCCTGCTGGTTGGCCGGGCGTGGCATCGGCCTCGACAGCGTGATCTTTCCCTACCGCAAGCCGGCCCACTTCGG
CGACTACGCCCTGATCTTCACCGAGGACTCACGCTTCGCGCCAACCGTGCCAGGCGGCATGGGCACGCTGGTCGCCAGCT
TCAACGCCAACCTGCTCGATCTCCCCATCCGTCGCGACGAGGCGGCGCTGGCCAGCTTTCTCGATGGCGCGCCGGGCAAG
ATCACCATGCTCTACCGGCGCGACCGGGAAATGGTCATCCGGGTCCGCGACCTGTTACGCGCTGCGCTGCCTGAAACCCT
GAGCCTGGACGACATCGCCGACCGACTGCACCTGTCGCCACGCACCGTCCACCGCCGGCTGGAAGAAGAAGGATCGAGCT
TCCGCGGCATCAAGGACGCCCTGCGTCGCGACATGGCACTGGCCCGCCTGACCAAGACCCGCGACTCCATCGCCAAGGTC
GCCGCCGACCTCGGCTACGCGGACACCTCGGCCTTCTATCGCGCCTTCGTCGAATGGACCGGCATGGCGCCCGTTCGTTA
CCGCCGCCAATGGGCAGCCAAGGGATGA

Upstream 100 bases:

>100_bases
GGCCGCTTTATCCCTCGCACCATTGTGGCGATAGACGACAATCATGCAAATTCAGCCAAGGTGATAGACTGGGAATCCAC
GCTTTAAAATCCAATCAAAA

Downstream 100 bases:

>100_bases
AATAGCCATTTCCTGCAAATATCCTTAGTACTTGCAGGGCCTTTTGGCGCATACTTTTAAACGCCAAAATCACAAATAGT
GAGGCAACCTGTGCGCACAC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MVHRTIGNSSPRSQATVAMGFVTGMLAGIAHRQIDLSPLLAALEIDIADTASRIPIDRYAELYNRLNRQLDDEAFALFAQ
PMRVGSFEFLCRGCLSAATLADALTRAARFLHVVLPDLAVSVRRSHGHAELVIAETRRLADNPEDPGRIFAFEWLLRLLH
GLSCWLAGRGIGLDSVIFPYRKPAHFGDYALIFTEDSRFAPTVPGGMGTLVASFNANLLDLPIRRDEAALASFLDGAPGK
ITMLYRRDREMVIRVRDLLRAALPETLSLDDIADRLHLSPRTVHRRLEEEGSSFRGIKDALRRDMALARLTKTRDSIAKV
AADLGYADTSAFYRAFVEWTGMAPVRYRRQWAAKG

Sequences:

>Translated_355_residues
MVHRTIGNSSPRSQATVAMGFVTGMLAGIAHRQIDLSPLLAALEIDIADTASRIPIDRYAELYNRLNRQLDDEAFALFAQ
PMRVGSFEFLCRGCLSAATLADALTRAARFLHVVLPDLAVSVRRSHGHAELVIAETRRLADNPEDPGRIFAFEWLLRLLH
GLSCWLAGRGIGLDSVIFPYRKPAHFGDYALIFTEDSRFAPTVPGGMGTLVASFNANLLDLPIRRDEAALASFLDGAPGK
ITMLYRRDREMVIRVRDLLRAALPETLSLDDIADRLHLSPRTVHRRLEEEGSSFRGIKDALRRDMALARLTKTRDSIAKV
AADLGYADTSAFYRAFVEWTGMAPVRYRRQWAAKG
>Mature_355_residues
MVHRTIGNSSPRSQATVAMGFVTGMLAGIAHRQIDLSPLLAALEIDIADTASRIPIDRYAELYNRLNRQLDDEAFALFAQ
PMRVGSFEFLCRGCLSAATLADALTRAARFLHVVLPDLAVSVRRSHGHAELVIAETRRLADNPEDPGRIFAFEWLLRLLH
GLSCWLAGRGIGLDSVIFPYRKPAHFGDYALIFTEDSRFAPTVPGGMGTLVASFNANLLDLPIRRDEAALASFLDGAPGK
ITMLYRRDREMVIRVRDLLRAALPETLSLDDIADRLHLSPRTVHRRLEEEGSSFRGIKDALRRDMALARLTKTRDSIAKV
AADLGYADTSAFYRAFVEWTGMAPVRYRRQWAAKG

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 39503; Mature: 39503

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHRTIGNSSPRSQATVAMGFVTGMLAGIAHRQIDLSPLLAALEIDIADTASRIPIDRYA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEHHHCCCCCCHHHHH
ELYNRLNRQLDDEAFALFAQPMRVGSFEFLCRGCLSAATLADALTRAARFLHVVLPDLAV
HHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVRRSHGHAELVIAETRRLADNPEDPGRIFAFEWLLRLLHGLSCWLAGRGIGLDSVIFPY
HHHHCCCCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
RKPAHFGDYALIFTEDSRFAPTVPGGMGTLVASFNANLLDLPIRRDEAALASFLDGAPGK
CCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCE
ITMLYRRDREMVIRVRDLLRAALPETLSLDDIADRLHLSPRTVHRRLEEEGSSFRGIKDA
EEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHH
LRRDMALARLTKTRDSIAKVAADLGYADTSAFYRAFVEWTGMAPVRYRRQWAAKG
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MVHRTIGNSSPRSQATVAMGFVTGMLAGIAHRQIDLSPLLAALEIDIADTASRIPIDRYA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEHHHCCCCCCHHHHH
ELYNRLNRQLDDEAFALFAQPMRVGSFEFLCRGCLSAATLADALTRAARFLHVVLPDLAV
HHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVRRSHGHAELVIAETRRLADNPEDPGRIFAFEWLLRLLHGLSCWLAGRGIGLDSVIFPY
HHHHCCCCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
RKPAHFGDYALIFTEDSRFAPTVPGGMGTLVASFNANLLDLPIRRDEAALASFLDGAPGK
CCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCE
ITMLYRRDREMVIRVRDLLRAALPETLSLDDIADRLHLSPRTVHRRLEEEGSSFRGIKDA
EEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHH
LRRDMALARLTKTRDSIAKVAADLGYADTSAFYRAFVEWTGMAPVRYRRQWAAKG
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]