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The map label for this gene is yegQ [C]

Identifier: 71905821

GI number: 71905821

Start: 196780

End: 198051

Strand: Reverse

Name: yegQ [C]

Synonym: Daro_0179

Alternate gene names: 71905821

Gene position: 198051-196780 (Counterclockwise)

Preceding gene: 71905825

Following gene: 71905820

Centisome position: 4.4

GC content: 61.79

Gene sequence:

>1272_bases
ATGCCCAAAGCTCCCGAACTCCTCGCGCCTGCCGGCTCACTCGACATGATGCGCACCGCCTTCGATTTTGGCGCCGATGC
GATCTATGCCGGTCAACCACGCTACAGCCTGCGCGTCCGCAACAACGAGTTCGGCAGCATGGAGAAACTGGGCGAAGGCA
TCGACGAAGCGCATGCCCGCGGCAAGCAGTTTTTCGTCGTCAGCAACATCATTCCGCACAACGCCAAGCTGACCACCTAT
CTAGCCGACATGGCGCCGGTCATCGCCCTGAAGCCGGACGCCCTGATCATGTCCGACCCGGGCCTGATCGACATGGTGCG
CGAAACCTGGCCGGAACAGGTCATCCATCTGTCGGTGCAGGCCAACACGGTCAACTGGGCTTCGGTGCGTTTCTGGCAGA
AGATGGGCGTCCAGCGCATCATCCTGTCGCGCGAACTGTCGCTTGATGAAGTCGCCGAAATCCGCCAGCGCTGCCCGGAT
ATCGAACTCGAAGTCTTCGTTCATGGCGCGCTGTGCATCGCCTATTCCGGCCGTTGCCTGCTGTCCGGCTACTTCAATCA
CCGCGACCCGAACCAGGGCACCTGCACCAACTCCTGCCGCTGGGATTACAAGGTCAGCACCTCCGACGGGCAGCCGGCGC
AAATGATCCGGCAGGAGCAGGAAATCCTGATCGAGGAGAAGATGCGGCCCGGCGAGTTGATGCCGATCGAAGAAGACGAG
CACGGCACCTACATCCTGAACTCCAAGGACCTGCGCGCCATCGAACACGTGCATCGACTGGTCGAGATCGGTGTTGACTC
CCTGAAGATCGAAGGCCGCACCAAGAGCCCCTACTACGTTGCCCGGACCAGCCAGGCCTACCGCCAGGCCATCGACGATG
CCGTCGCCGGAAAACCGCTCGACCCGGCCCTGTTGCGCGAACTGGAAGGCCTGGCTAACCGTGGCTATACCGACGGCTTC
CTGCAGCGCCACCACGATGCCGATTATCAGAACTACCTGCGCGGCAGTTCCGAGTCGGACCGCAGCCTGTACGTCGGCGA
TGCCGTAGGTTTCGATACGGCGCGCGGCCTGATGGAAATCGAGGTCAAGAACCGCTTCTCGGTGGGCGACCGCCTGGAAT
GCGTCCACCCCTCCGGCAACTATGTTTTGTCGCTGGACCGCATGGAAGACAAGGCCGGCCAGCCCGTCACTGTCGCCCCC
GGCAGCGGCCACCGGGTCTGGATTAATTTGCCGGCCATGTACACCAATTCCTTTGTCGCGCGTTTTGTCTAA

Upstream 100 bases:

>100_bases
CCTTGTTGCATGACAGCAACGCGAGTCTCCTGCGGCGTGAAATTGATCAGTATCTCTTCGGTCATGGGGCGTAGAATGCA
CGGTTTTGCTGCATTCTACT

Downstream 100 bases:

>100_bases
CAAACGCCATACAAATCAACAACAAATCATCTTTGTGCACCGCAGCAAAACGTGTAACATTCAAGTCATGAGCCAAAACG
CCTCCCGCATGCCGCTAATC

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MPKAPELLAPAGSLDMMRTAFDFGADAIYAGQPRYSLRVRNNEFGSMEKLGEGIDEAHARGKQFFVVSNIIPHNAKLTTY
LADMAPVIALKPDALIMSDPGLIDMVRETWPEQVIHLSVQANTVNWASVRFWQKMGVQRIILSRELSLDEVAEIRQRCPD
IELEVFVHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVSTSDGQPAQMIRQEQEILIEEKMRPGELMPIEEDE
HGTYILNSKDLRAIEHVHRLVEIGVDSLKIEGRTKSPYYVARTSQAYRQAIDDAVAGKPLDPALLRELEGLANRGYTDGF
LQRHHDADYQNYLRGSSESDRSLYVGDAVGFDTARGLMEIEVKNRFSVGDRLECVHPSGNYVLSLDRMEDKAGQPVTVAP
GSGHRVWINLPAMYTNSFVARFV

Sequences:

>Translated_423_residues
MPKAPELLAPAGSLDMMRTAFDFGADAIYAGQPRYSLRVRNNEFGSMEKLGEGIDEAHARGKQFFVVSNIIPHNAKLTTY
LADMAPVIALKPDALIMSDPGLIDMVRETWPEQVIHLSVQANTVNWASVRFWQKMGVQRIILSRELSLDEVAEIRQRCPD
IELEVFVHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVSTSDGQPAQMIRQEQEILIEEKMRPGELMPIEEDE
HGTYILNSKDLRAIEHVHRLVEIGVDSLKIEGRTKSPYYVARTSQAYRQAIDDAVAGKPLDPALLRELEGLANRGYTDGF
LQRHHDADYQNYLRGSSESDRSLYVGDAVGFDTARGLMEIEVKNRFSVGDRLECVHPSGNYVLSLDRMEDKAGQPVTVAP
GSGHRVWINLPAMYTNSFVARFV
>Mature_422_residues
PKAPELLAPAGSLDMMRTAFDFGADAIYAGQPRYSLRVRNNEFGSMEKLGEGIDEAHARGKQFFVVSNIIPHNAKLTTYL
ADMAPVIALKPDALIMSDPGLIDMVRETWPEQVIHLSVQANTVNWASVRFWQKMGVQRIILSRELSLDEVAEIRQRCPDI
ELEVFVHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVSTSDGQPAQMIRQEQEILIEEKMRPGELMPIEEDEH
GTYILNSKDLRAIEHVHRLVEIGVDSLKIEGRTKSPYYVARTSQAYRQAIDDAVAGKPLDPALLRELEGLANRGYTDGFL
QRHHDADYQNYLRGSSESDRSLYVGDAVGFDTARGLMEIEVKNRFSVGDRLECVHPSGNYVLSLDRMEDKAGQPVTVAPG
SGHRVWINLPAMYTNSFVARFV

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=427, Percent_Identity=60.1873536299766, Blast_Score=508, Evalue=1e-145,
Organism=Escherichia coli, GI87081910, Length=352, Percent_Identity=29.8295454545455, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1789548, Length=310, Percent_Identity=30.3225806451613, Blast_Score=128, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 47507; Mature: 47376

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKAPELLAPAGSLDMMRTAFDFGADAIYAGQPRYSLRVRNNEFGSMEKLGEGIDEAHAR
CCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCHHHHHCCHHHHHHC
GKQFFVVSNIIPHNAKLTTYLADMAPVIALKPDALIMSDPGLIDMVRETWPEQVIHLSVQ
CCEEEEEECCCCCCCCHHHHHHHHCCEEEECCCEEEECCCCHHHHHHHCCCCEEEEEEEE
ANTVNWASVRFWQKMGVQRIILSRELSLDEVAEIRQRCPDIELEVFVHGALCIAYSGRCL
ECCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCEE
LSGYFNHRDPNQGTCTNSCRWDYKVSTSDGQPAQMIRQEQEILIEEKMRPGELMPIEEDE
EEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
HGTYILNSKDLRAIEHVHRLVEIGVDSLKIEGRTKSPYYVARTSQAYRQAIDDAVAGKPL
CCEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECHHHHHHHHHHHHCCCCC
DPALLRELEGLANRGYTDGFLQRHHDADYQNYLRGSSESDRSLYVGDAVGFDTARGLMEI
CHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCHHHCCEEEE
EVKNRFSVGDRLECVHPSGNYVLSLDRMEDKAGQPVTVAPGSGHRVWINLPAMYTNSFVA
EECCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCEEECCCCCCEEEEECCHHHHCHHHH
RFV
HCC
>Mature Secondary Structure 
PKAPELLAPAGSLDMMRTAFDFGADAIYAGQPRYSLRVRNNEFGSMEKLGEGIDEAHAR
CCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCHHHHHCCHHHHHHC
GKQFFVVSNIIPHNAKLTTYLADMAPVIALKPDALIMSDPGLIDMVRETWPEQVIHLSVQ
CCEEEEEECCCCCCCCHHHHHHHHCCEEEECCCEEEECCCCHHHHHHHCCCCEEEEEEEE
ANTVNWASVRFWQKMGVQRIILSRELSLDEVAEIRQRCPDIELEVFVHGALCIAYSGRCL
ECCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCEE
LSGYFNHRDPNQGTCTNSCRWDYKVSTSDGQPAQMIRQEQEILIEEKMRPGELMPIEEDE
EEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
HGTYILNSKDLRAIEHVHRLVEIGVDSLKIEGRTKSPYYVARTSQAYRQAIDDAVAGKPL
CCEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECHHHHHHHHHHHHCCCCC
DPALLRELEGLANRGYTDGFLQRHHDADYQNYLRGSSESDRSLYVGDAVGFDTARGLMEI
CHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCHHHCCEEEE
EVKNRFSVGDRLECVHPSGNYVLSLDRMEDKAGQPVTVAPGSGHRVWINLPAMYTNSFVA
EECCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCEEECCCCCCEEEEECCHHHHCHHHH
RFV
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]