| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is ampG [C]
Identifier: 71905770
GI number: 71905770
Start: 141296
End: 142564
Strand: Reverse
Name: ampG [C]
Synonym: Daro_0128
Alternate gene names: 71905770
Gene position: 142564-141296 (Counterclockwise)
Preceding gene: 71905771
Following gene: 71905764
Centisome position: 3.17
GC content: 60.91
Gene sequence:
>1269_bases ATGCCGCCCTGGCTTTCGGCCCTGCTCACCCGGAAGATGCTGATCTGCATCTTTACGGGATTTTCGTCCGGCCTGCCGCT CTACCTGCTCCTCAACCTGCTGCCTGCCTGGCTACGTAGCGAGGGCGTGGACCTCAAGACCATCGGCTTCTTCGCGCTGA TCCAGTTTCCCTACACCTGGAAATTCCTCTGGTCGCCCCTGCTCGACCGCTACAGCCTGCCAGGCTTCGGCCGCCGCCGC GGCTGGATGCTGATCACGCAAATCGGCCTGCTGTTCTCGATCGGTTTCCTCGGCGGGTTCAATCCGAAGGAAAGCATCTG GCCGATCCTCTGGCTCGCTACCCTGCTTTCGCTGCTTTCAGCCACTCAGGACATCGCCGTGGATGCCTTTCGGCGGGAAA TCCTGGGCGACAACGAACTTGGCCTGGGCAATGCCGTGCATGTCAATGCCTACCGGATCGCCGGCCTGATTCCCGGCTCG CTATCGCTGATTATTGCCGATCGCCTACCCTGGAACGAAGTCTTCTGGATTACCGGCGCCTTTATGATTCCGGGCATGGC CATGGCCTGGCTGGTCACGGAACCGACGATCAAGGGCGCACCCAAAACGCTGCGTCAGGCCGTCACCGAGCCTTTCCACG AATTCATAGGCCGCCAGGGCTGGCGGGGTGCCATCACGGTACTCGGCTTCATCTTCCTGTACAAACTGGGCGATAGTCTG AGTACCGCGCTGGCCACCCCGTTCTATCTGGACATGGGCTTCACCAAGACCGACATCGGCCTGATCGCCAAGCATGCGGG GCTATGGCCGGCAGTCATCGGCGCCCTGCTCGGCGGACTGTGGATGGTTCGGCTGGGCATTAACCGAGCCCTATGGCTAT TCGGTGTAGTTCAACTGGTATCCATCTTCGGTTTCGCCTGGCTGTCCAGCCAGGGACACTACGACAGCATCGGGGCCAGC GAGCGGATTGCGCTGGCTTTCGTTATCGGCCTTGAGGCCCTTGGCGTCGGATTGGGAACGGCAGCCTTTGTTGCCTTCAT TGCGCGTTCGACGCATCCGGCTTACACGGCCACGCAAATGGCCCTATTCACCAGCCTGGCTGCGGTGCCGCGCACCTTCA TCAATGCCTCGGCAGGATGGCTGGTTGAAAACCTTGGCTGGTACGGTTTCTTTTGGCTGTGTGCCGGCCTGGCAGTACCG GGGATGGTCCTTCTACTGAAAGTCGCCCCGTGGAACGAGCGTCCAGACTCGGCTACTCGCCCCGTCTAA
Upstream 100 bases:
>100_bases ATGTGCTGGATGAAGACGGCAATATCGTCCATAACACCGACAACCGCGAAATCAATTTCCTCGGCAGCCTGGCGGTCTAT CGCCTGACGCAAAACCGCTG
Downstream 100 bases:
>100_bases GACGGCGGCGATCCAACCACCACGCATACACCGGAAGCATCAGGACCGATCCCGGCAGAAGCAGCGCAATCAGATAGGGC GACAGGTGAGCCATCCGTCG
Product: major facilitator transporter
Products: NA
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MPPWLSALLTRKMLICIFTGFSSGLPLYLLLNLLPAWLRSEGVDLKTIGFFALIQFPYTWKFLWSPLLDRYSLPGFGRRR GWMLITQIGLLFSIGFLGGFNPKESIWPILWLATLLSLLSATQDIAVDAFRREILGDNELGLGNAVHVNAYRIAGLIPGS LSLIIADRLPWNEVFWITGAFMIPGMAMAWLVTEPTIKGAPKTLRQAVTEPFHEFIGRQGWRGAITVLGFIFLYKLGDSL STALATPFYLDMGFTKTDIGLIAKHAGLWPAVIGALLGGLWMVRLGINRALWLFGVVQLVSIFGFAWLSSQGHYDSIGAS ERIALAFVIGLEALGVGLGTAAFVAFIARSTHPAYTATQMALFTSLAAVPRTFINASAGWLVENLGWYGFFWLCAGLAVP GMVLLLKVAPWNERPDSATRPV
Sequences:
>Translated_422_residues MPPWLSALLTRKMLICIFTGFSSGLPLYLLLNLLPAWLRSEGVDLKTIGFFALIQFPYTWKFLWSPLLDRYSLPGFGRRR GWMLITQIGLLFSIGFLGGFNPKESIWPILWLATLLSLLSATQDIAVDAFRREILGDNELGLGNAVHVNAYRIAGLIPGS LSLIIADRLPWNEVFWITGAFMIPGMAMAWLVTEPTIKGAPKTLRQAVTEPFHEFIGRQGWRGAITVLGFIFLYKLGDSL STALATPFYLDMGFTKTDIGLIAKHAGLWPAVIGALLGGLWMVRLGINRALWLFGVVQLVSIFGFAWLSSQGHYDSIGAS ERIALAFVIGLEALGVGLGTAAFVAFIARSTHPAYTATQMALFTSLAAVPRTFINASAGWLVENLGWYGFFWLCAGLAVP GMVLLLKVAPWNERPDSATRPV >Mature_421_residues PPWLSALLTRKMLICIFTGFSSGLPLYLLLNLLPAWLRSEGVDLKTIGFFALIQFPYTWKFLWSPLLDRYSLPGFGRRRG WMLITQIGLLFSIGFLGGFNPKESIWPILWLATLLSLLSATQDIAVDAFRREILGDNELGLGNAVHVNAYRIAGLIPGSL SLIIADRLPWNEVFWITGAFMIPGMAMAWLVTEPTIKGAPKTLRQAVTEPFHEFIGRQGWRGAITVLGFIFLYKLGDSLS TALATPFYLDMGFTKTDIGLIAKHAGLWPAVIGALLGGLWMVRLGINRALWLFGVVQLVSIFGFAWLSSQGHYDSIGASE RIALAFVIGLEALGVGLGTAAFVAFIARSTHPAYTATQMALFTSLAAVPRTFINASAGWLVENLGWYGFFWLCAGLAVPG MVLLLKVAPWNERPDSATRPV
Specific function: Probably Acts As A Permease In The Beta-Lactamase Induction System And In Peptidoglycan Recycling. [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli AmpG and yeast YBR220c [H]
Homologues:
Organism=Homo sapiens, GI19923957, Length=318, Percent_Identity=27.6729559748428, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI1786636, Length=396, Percent_Identity=42.1717171717172, Blast_Score=277, Evalue=7e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004752 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46342; Mature: 46211
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPWLSALLTRKMLICIFTGFSSGLPLYLLLNLLPAWLRSEGVDLKTIGFFALIQFPYTW CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHH KFLWSPLLDRYSLPGFGRRRGWMLITQIGLLFSIGFLGGFNPKESIWPILWLATLLSLLS HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ATQDIAVDAFRREILGDNELGLGNAVHVNAYRIAGLIPGSLSLIIADRLPWNEVFWITGA HHHHHHHHHHHHHHCCCCCCCCCCEEEEEHEEEEEECCCCEEEEEECCCCCCHHHEEHHH FMIPGMAMAWLVTEPTIKGAPKTLRQAVTEPFHEFIGRQGWRGAITVLGFIFLYKLGDSL HHHCCHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHH STALATPFYLDMGFTKTDIGLIAKHAGLWPAVIGALLGGLWMVRLGINRALWLFGVVQLV HHHHCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIFGFAWLSSQGHYDSIGASERIALAFVIGLEALGVGLGTAAFVAFIARSTHPAYTATQM HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHH ALFTSLAAVPRTFINASAGWLVENLGWYGFFWLCAGLAVPGMVLLLKVAPWNERPDSATR HHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC PV CC >Mature Secondary Structure PPWLSALLTRKMLICIFTGFSSGLPLYLLLNLLPAWLRSEGVDLKTIGFFALIQFPYTW CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHH KFLWSPLLDRYSLPGFGRRRGWMLITQIGLLFSIGFLGGFNPKESIWPILWLATLLSLLS HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ATQDIAVDAFRREILGDNELGLGNAVHVNAYRIAGLIPGSLSLIIADRLPWNEVFWITGA HHHHHHHHHHHHHHCCCCCCCCCCEEEEEHEEEEEECCCCEEEEEECCCCCCHHHEEHHH FMIPGMAMAWLVTEPTIKGAPKTLRQAVTEPFHEFIGRQGWRGAITVLGFIFLYKLGDSL HHHCCHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHH STALATPFYLDMGFTKTDIGLIAKHAGLWPAVIGALLGGLWMVRLGINRALWLFGVVQLV HHHHCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIFGFAWLSSQGHYDSIGASERIALAFVIGLEALGVGLGTAAFVAFIARSTHPAYTATQM HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHH ALFTSLAAVPRTFINASAGWLVENLGWYGFFWLCAGLAVPGMVLLLKVAPWNERPDSATR HHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC PV CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1956282; 7542800 [H]