Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is ycbL [C]

Identifier: 71905725

GI number: 71905725

Start: 100399

End: 101313

Strand: Reverse

Name: ycbL [C]

Synonym: Daro_0083

Alternate gene names: 71905725

Gene position: 101313-100399 (Counterclockwise)

Preceding gene: 71905726

Following gene: 71905724

Centisome position: 2.25

GC content: 60.77

Gene sequence:

>915_bases
ATGACCGTCAAGCTCCCTGGCAGCATGCAGGTTCTCGAACGTGGCTGGCTGTCGGCCAACAACATCCTGTTTTTCGATGG
CGAGAAGGCGACGCTGGTCGACAGCGGCTATGTCACCCATGCCGGGCAAACCGTCGAGCTGGTCCGCCACTCGCTGGCCG
GCCGGCAACTCAGCCGGTTGATCAACACCCATTCCCATTCCGACCACATTGGCGGCAATGCGGCCCTGAAGGCCGCCTTC
GACTGCGAGATCATCGTTCCAGCCGGGCTGCACGCGGCGATTGCCGACTGGGATGAAGATGCCCTGCTTCTCTCACCGCT
CGGCCAGCAGAATGCGCGCTTCCAGCACGACAGCCTGATCGGCCCCGACAACGAGATCGAGATGGGCGGCCTCAACTGGC
AGGCCCTGGCTGTTCCCGGCCACGACATGGAAGCGTTGGCCTACTACAACCCGGAGCAGCGCATCCTGATCTCCGGCGAC
GCGCTGTGGGAAAACGGCTTCGGCGTCATTTTCCCGGAACTGCTCGGTGAAGCAGATGGCCTGGCTAGCACCCAGGCGAC
CCTGGAAATGCTTTCCCATCTGGCCATCGACACAGTCATCCCCGGTCACGGCCGACCGTTCTCCACCGTTGATGCTGCAT
TCGAGCGCGCTTTCCGGCGCCTCAACCAGTTCCAGAACAATATCGAACAGCTGGCCTGGCACGCCATCAAGGTCATCGTC
GCCTTTGCCATGATGGAAAAACGGCGGATCGTGAAAAACGACTTTCCGGCCTTTGTCCTCGCCCTGCCCTTCGCCGTTGA
CGTCAATACCCGTTTTCTCAGCATGGCAGATGACGCCCTGGTCGCCAAGATCGAACGCGAATTGCTACTGGTTAACGCCC
TTAGGCTTGAAGACGGCATGATCCTCGCCGGTTAA

Upstream 100 bases:

>100_bases
GCTGCGGCCGCCCGCCGCTCGGCGAACCCGGCATCGTGGCCGAATTGACCCAAGCCACAACGGCAGTGCCCAGCACGCAT
GGTGACCCGGACACACCTGA

Downstream 100 bases:

>100_bases
ATCGGCTGGCTTGCCAAGAACCGACCAGCACAATCAAGCCCTTAATTAAACCAGGGGTTTTCCATCAGTTTCCGTCACCG
CTTGTTGCTGGGGACCGCCC

Product: Beta-lactamase-like

Products: NA

Alternate protein names: Beta-Lactamase Domain-Containing Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Hydroxyacylglutathione Hydrolase; Beta Lactamase; Beta Lactamase Protein; Beta-Lactamase

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTVKLPGSMQVLERGWLSANNILFFDGEKATLVDSGYVTHAGQTVELVRHSLAGRQLSRLINTHSHSDHIGGNAALKAAF
DCEIIVPAGLHAAIADWDEDALLLSPLGQQNARFQHDSLIGPDNEIEMGGLNWQALAVPGHDMEALAYYNPEQRILISGD
ALWENGFGVIFPELLGEADGLASTQATLEMLSHLAIDTVIPGHGRPFSTVDAAFERAFRRLNQFQNNIEQLAWHAIKVIV
AFAMMEKRRIVKNDFPAFVLALPFAVDVNTRFLSMADDALVAKIERELLLVNALRLEDGMILAG

Sequences:

>Translated_304_residues
MTVKLPGSMQVLERGWLSANNILFFDGEKATLVDSGYVTHAGQTVELVRHSLAGRQLSRLINTHSHSDHIGGNAALKAAF
DCEIIVPAGLHAAIADWDEDALLLSPLGQQNARFQHDSLIGPDNEIEMGGLNWQALAVPGHDMEALAYYNPEQRILISGD
ALWENGFGVIFPELLGEADGLASTQATLEMLSHLAIDTVIPGHGRPFSTVDAAFERAFRRLNQFQNNIEQLAWHAIKVIV
AFAMMEKRRIVKNDFPAFVLALPFAVDVNTRFLSMADDALVAKIERELLLVNALRLEDGMILAG
>Mature_303_residues
TVKLPGSMQVLERGWLSANNILFFDGEKATLVDSGYVTHAGQTVELVRHSLAGRQLSRLINTHSHSDHIGGNAALKAAFD
CEIIVPAGLHAAIADWDEDALLLSPLGQQNARFQHDSLIGPDNEIEMGGLNWQALAVPGHDMEALAYYNPEQRILISGDA
LWENGFGVIFPELLGEADGLASTQATLEMLSHLAIDTVIPGHGRPFSTVDAAFERAFRRLNQFQNNIEQLAWHAIKVIVA
FAMMEKRRIVKNDFPAFVLALPFAVDVNTRFLSMADDALVAKIERELLLVNALRLEDGMILAG

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33327; Mature: 33195

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKLPGSMQVLERGWLSANNILFFDGEKATLVDSGYVTHAGQTVELVRHSLAGRQLSRL
CEEECCCCHHHHHHCCCCCCCEEEECCCCEEEEECCCEECCCCHHHHHHHHHHHHHHHHH
INTHSHSDHIGGNAALKAAFDCEIIVPAGLHAAIADWDEDALLLSPLGQQNARFQHDSLI
HHCCCCCCCCCCCCEEEEEECEEEEECCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCC
GPDNEIEMGGLNWQALAVPGHDMEALAYYNPEQRILISGDALWENGFGVIFPELLGEADG
CCCCCEEECCCCEEEEEECCCCCCEEEEECCCCEEEEECCEEEECCCCEECHHHCCCCCC
LASTQATLEMLSHLAIDTVIPGHGRPFSTVDAAFERAFRRLNQFQNNIEQLAWHAIKVIV
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAMMEKRRIVKNDFPAFVLALPFAVDVNTRFLSMADDALVAKIERELLLVNALRLEDGM
HHHHHHHHHHHHCCCCEEEEEECEEEECCCCEEHHHHHHHHHHHHHHHHHHHHEEECCCE
ILAG
EECC
>Mature Secondary Structure 
TVKLPGSMQVLERGWLSANNILFFDGEKATLVDSGYVTHAGQTVELVRHSLAGRQLSRL
EEECCCCHHHHHHCCCCCCCEEEECCCCEEEEECCCEECCCCHHHHHHHHHHHHHHHHH
INTHSHSDHIGGNAALKAAFDCEIIVPAGLHAAIADWDEDALLLSPLGQQNARFQHDSLI
HHCCCCCCCCCCCCEEEEEECEEEEECCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCC
GPDNEIEMGGLNWQALAVPGHDMEALAYYNPEQRILISGDALWENGFGVIFPELLGEADG
CCCCCEEECCCCEEEEEECCCCCCEEEEECCCCEEEEECCEEEECCCCEECHHHCCCCCC
LASTQATLEMLSHLAIDTVIPGHGRPFSTVDAAFERAFRRLNQFQNNIEQLAWHAIKVIV
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAMMEKRRIVKNDFPAFVLALPFAVDVNTRFLSMADDALVAKIERELLLVNALRLEDGM
HHHHHHHHHHHHCCCCEEEEEECEEEECCCCEEHHHHHHHHHHHHHHHHHHHHEEECCCE
ILAG
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA