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The map label for this gene is ycaC [C]

Identifier: 71905697

GI number: 71905697

Start: 64513

End: 65055

Strand: Reverse

Name: ycaC [C]

Synonym: Daro_0055

Alternate gene names: 71905697

Gene position: 65055-64513 (Counterclockwise)

Preceding gene: 71905698

Following gene: 71905693

Centisome position: 1.45

GC content: 60.77

Gene sequence:

>543_bases
ATGCTGATTCGACGTGACGATTCGCTGCTGCTGATCGTCGACATTCAGGAAAAATTGGCGCCGGCCATTCACGACAACGA
GCGCGTTACGGCCAATTCGGCTCGCCTGCTTGAAGGTGCTCGCCTCCTGGACATCCCAGCCTTCGTGTCCGAGCAATACG
TCAAAGGTCTGGGTTCCAGCGTCCAGGCCATCCGCGATGCAGCGGGTAGCGCCAGATTCTTCGAAAAAACGCACTTCTCC
TGCGCGGCCGAACCCGGCATCGTCGACCTGTTGCTGGCAGCCAAACGGCCACAGGTCATCCTGACCGGTACCGAAACCCA
TGTCTGCGTGCTGCAAACGGCTTTCGGCCTGCAGGCTGCCGGGTTTGAGGTCTATCTGGTCGCCGATGCAGCCTCGTCGC
GCACCCCGGAAAACCGCAGCGCCGCCATTGAGCGGATGCGGGCTGGCGGCATCCGTATCGTCACCACCGAAATGGTCCTT
TTCGAGTGGCTGCATCAGGCCGGAACGAGTGAGTTCCGGACCCTGCTCCCGCTGATCAAGTAA

Upstream 100 bases:

>100_bases
ACGGCAAGGACATCGAGAAGACGGTACTCGCTCGTGGCCTGCGCTATCACCTCGAGGATCGCGTCCTCGTTCACGGCAAC
AAGACGGTCGTTTTCCGCTG

Downstream 100 bases:

>100_bases
GCAGCGCCGCCTCGCCCTTTCCACGGCGATCACCCGGAAACCACGGGCAAAAACAAATACCGCAAAAAAAACGGGCACCC
GAAGGTGCCCGAAGGGAGAG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase Superfamily Hydrolase; Isochorismatase Hydrolase Family Protein; Nicotinamidase-Like Amidase; Hydrolase; Amidase; Isochorismatase; Isochorismatase Family Hydrolase; Isochorismatase Domain-Containing; Amidohydrolase; Hydrolase Isochorismatase; Amidase Related Nicotinamidase; YcaC Like Amidohydrolase; Isochorismatase Hydrolase Protein; Isochorismatase Family; Nicotinamidase; YcaC-Related Amidohydrolase; Isochorismatase Protein; Isochorismatase Domain-Containing A; Isochorismatase Hydrolase Family; Hydrolase Isochorismatase Family; Nicotinamidase-Related Amidase

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MLIRRDDSLLLIVDIQEKLAPAIHDNERVTANSARLLEGARLLDIPAFVSEQYVKGLGSSVQAIRDAAGSARFFEKTHFS
CAAEPGIVDLLLAAKRPQVILTGTETHVCVLQTAFGLQAAGFEVYLVADAASSRTPENRSAAIERMRAGGIRIVTTEMVL
FEWLHQAGTSEFRTLLPLIK

Sequences:

>Translated_180_residues
MLIRRDDSLLLIVDIQEKLAPAIHDNERVTANSARLLEGARLLDIPAFVSEQYVKGLGSSVQAIRDAAGSARFFEKTHFS
CAAEPGIVDLLLAAKRPQVILTGTETHVCVLQTAFGLQAAGFEVYLVADAASSRTPENRSAAIERMRAGGIRIVTTEMVL
FEWLHQAGTSEFRTLLPLIK
>Mature_180_residues
MLIRRDDSLLLIVDIQEKLAPAIHDNERVTANSARLLEGARLLDIPAFVSEQYVKGLGSSVQAIRDAAGSARFFEKTHFS
CAAEPGIVDLLLAAKRPQVILTGTETHVCVLQTAFGLQAAGFEVYLVADAASSRTPENRSAAIERMRAGGIRIVTTEMVL
FEWLHQAGTSEFRTLLPLIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI103471987, Length=175, Percent_Identity=40, Blast_Score=114, Evalue=6e-26,
Organism=Homo sapiens, GI209969695, Length=176, Percent_Identity=34.6590909090909, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI13376007, Length=192, Percent_Identity=31.7708333333333, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17540156, Length=178, Percent_Identity=36.5168539325843, Blast_Score=108, Evalue=1e-24,
Organism=Drosophila melanogaster, GI21357489, Length=176, Percent_Identity=36.9318181818182, Blast_Score=115, Evalue=1e-26,
Organism=Drosophila melanogaster, GI19922924, Length=175, Percent_Identity=32.5714285714286, Blast_Score=101, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19645; Mature: 19645

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIRRDDSLLLIVDIQEKLAPAIHDNERVTANSARLLEGARLLDIPAFVSEQYVKGLGSS
CEEECCCCEEEEEECHHHHCCHHCCCCEEECCHHHHHCCCEEEECHHHHHHHHHHHCCHH
VQAIRDAAGSARFFEKTHFSCAAEPGIVDLLLAAKRPQVILTGTETHVCVLQTAFGLQAA
HHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCCCEEEEEEHHCCCEEC
GFEVYLVADAASSRTPENRSAAIERMRAGGIRIVTTEMVLFEWLHQAGTSEFRTLLPLIK
CEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MLIRRDDSLLLIVDIQEKLAPAIHDNERVTANSARLLEGARLLDIPAFVSEQYVKGLGSS
CEEECCCCEEEEEECHHHHCCHHCCCCEEECCHHHHHCCCEEEECHHHHHHHHHHHCCHH
VQAIRDAAGSARFFEKTHFSCAAEPGIVDLLLAAKRPQVILTGTETHVCVLQTAFGLQAA
HHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCCCEEEEEEHHCCCEEC
GFEVYLVADAASSRTPENRSAAIERMRAGGIRIVTTEMVLFEWLHQAGTSEFRTLLPLIK
CEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA