| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71905669
Identifier: 71905669
GI number: 71905669
Start: 30899
End: 31804
Strand: Reverse
Name: 71905669
Synonym: Daro_0027
Alternate gene names: NA
Gene position: 31804-30899 (Counterclockwise)
Preceding gene: 71905677
Following gene: 71905668
Centisome position: 0.71
GC content: 60.49
Gene sequence:
>906_bases ATGCGCCAAATCTTCTCTGCCCTGCTTTTCTTTTCATTGGCCTTGCCGGCCTACGCCTGGAACGCAGCCGGCCACCGCTT GGTAGCCGTTATCGCCTGGCAACAACTATCGCCAGCAACACGTGACGCTATCTCGGCCGCGCTGGCCCACCATCCGGACC ATGAGCGCTGGGTCGAAAAAGCCCGCTCCCGCGAGGGGATAGCCGTTTTCGCCGAAGCCTCAACCTGGCCGGACGATATT CGCAATGACCCTCGCTTATATGACGAGGATCGCGAACCGCCCACCCCGGCCGTGCCCGGACTCCCTGAGACGGCACGCCA CAAACGCTGGCACTACGTCGATCTGGACGCCACGGGCAAGGTTCGTGACGGCGAACTCGACCGGCAGATCGAACGCCTGA GCCAACTGCTCCAGGCCAAAGGCTCATCCCCCGGCACGCGAAAGAGCGAACAGATTGCCTATGCCCTGCCCTGGCTGCTG CATCTCGTGGCCGACATCCATCAGCCATTGCATGTCGGGCAGCACGGCGACGAAGGTGGCAACAAGGTTGAAATCGAGAA TCCGTTCAACAAGCGCCTGCCCTTCAGCAGCCTGCATCTATACTGGGACGACCTACCCGGTCCGCCGTGGTTGCGCGGCA ACCGCCTCGAAAAGAATGCCGGCCGATTGCTCGACAGCTATCCGAAACCGGTTCAGGGAAATGTGGCGCTATGGCGGGAT GAAAGCCATCAATTGCTTGCTGCCGCCTACCCGAAAGTCAGCGGCAGCCTGCTTCCCATCATCAGCGAGGATTTTCAGGA CAATGCCCGCCAAATCGCCAATCGACGCATCGTCGAGGCTGGCTATCGACTGGGACACCTGCTTGAAAGCATCTTCCGCG AGCGCGTTTCACGTGAAACGCAATAG
Upstream 100 bases:
>100_bases GGCTGCATCGATGCGAGCGGCCTGCAGCAGGGCAAAAGCGAGTGAATTGAAGGGCAATCTGGACATAGTGCGCGATTATC GCACGCGGCATAATGAGCCA
Downstream 100 bases:
>100_bases AATTCCGTCATGAATGGCCTGCACCTGATCGCCGACCTGCACGACTGCCACTGCCCCTCGGGCCTGTTGCTCGATGCGCC ACGACTGGAACGCTATTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Phospholipase C/P1 Nuclease Domain-Containing Protein; 3-Nucleotidase/Nuclease; S1/P1 Endonuclease Family Protein; Endonuclease; Phospholipase C/P1 Nuclease Family Protein
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MRQIFSALLFFSLALPAYAWNAAGHRLVAVIAWQQLSPATRDAISAALAHHPDHERWVEKARSREGIAVFAEASTWPDDI RNDPRLYDEDREPPTPAVPGLPETARHKRWHYVDLDATGKVRDGELDRQIERLSQLLQAKGSSPGTRKSEQIAYALPWLL HLVADIHQPLHVGQHGDEGGNKVEIENPFNKRLPFSSLHLYWDDLPGPPWLRGNRLEKNAGRLLDSYPKPVQGNVALWRD ESHQLLAAAYPKVSGSLLPIISEDFQDNARQIANRRIVEAGYRLGHLLESIFRERVSRETQ
Sequences:
>Translated_301_residues MRQIFSALLFFSLALPAYAWNAAGHRLVAVIAWQQLSPATRDAISAALAHHPDHERWVEKARSREGIAVFAEASTWPDDI RNDPRLYDEDREPPTPAVPGLPETARHKRWHYVDLDATGKVRDGELDRQIERLSQLLQAKGSSPGTRKSEQIAYALPWLL HLVADIHQPLHVGQHGDEGGNKVEIENPFNKRLPFSSLHLYWDDLPGPPWLRGNRLEKNAGRLLDSYPKPVQGNVALWRD ESHQLLAAAYPKVSGSLLPIISEDFQDNARQIANRRIVEAGYRLGHLLESIFRERVSRETQ >Mature_301_residues MRQIFSALLFFSLALPAYAWNAAGHRLVAVIAWQQLSPATRDAISAALAHHPDHERWVEKARSREGIAVFAEASTWPDDI RNDPRLYDEDREPPTPAVPGLPETARHKRWHYVDLDATGKVRDGELDRQIERLSQLLQAKGSSPGTRKSEQIAYALPWLL HLVADIHQPLHVGQHGDEGGNKVEIENPFNKRLPFSSLHLYWDDLPGPPWLRGNRLEKNAGRLLDSYPKPVQGNVALWRD ESHQLLAAAYPKVSGSLLPIISEDFQDNARQIANRRIVEAGYRLGHLLESIFRERVSRETQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34126; Mature: 34126
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQIFSALLFFSLALPAYAWNAAGHRLVAVIAWQQLSPATRDAISAALAHHPDHERWVEK CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCHHHHHHHHHHHHCCCCHHHHHHH ARSREGIAVFAEASTWPDDIRNDPRLYDEDREPPTPAVPGLPETARHKRWHYVDLDATGK HHCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCC VRDGELDRQIERLSQLLQAKGSSPGTRKSEQIAYALPWLLHLVADIHQPLHVGQHGDEGG CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC NKVEIENPFNKRLPFSSLHLYWDDLPGPPWLRGNRLEKNAGRLLDSYPKPVQGNVALWRD CEEEECCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEC ESHQLLAAAYPKVSGSLLPIISEDFQDNARQIANRRIVEAGYRLGHLLESIFRERVSRET CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC Q C >Mature Secondary Structure MRQIFSALLFFSLALPAYAWNAAGHRLVAVIAWQQLSPATRDAISAALAHHPDHERWVEK CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCHHHHHHHHHHHHCCCCHHHHHHH ARSREGIAVFAEASTWPDDIRNDPRLYDEDREPPTPAVPGLPETARHKRWHYVDLDATGK HHCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCC VRDGELDRQIERLSQLLQAKGSSPGTRKSEQIAYALPWLLHLVADIHQPLHVGQHGDEGG CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC NKVEIENPFNKRLPFSSLHLYWDDLPGPPWLRGNRLEKNAGRLLDSYPKPVQGNVALWRD CEEEECCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEC ESHQLLAAAYPKVSGSLLPIISEDFQDNARQIANRRIVEAGYRLGHLLESIFRERVSRET CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA