Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71905669

Identifier: 71905669

GI number: 71905669

Start: 30899

End: 31804

Strand: Reverse

Name: 71905669

Synonym: Daro_0027

Alternate gene names: NA

Gene position: 31804-30899 (Counterclockwise)

Preceding gene: 71905677

Following gene: 71905668

Centisome position: 0.71

GC content: 60.49

Gene sequence:

>906_bases
ATGCGCCAAATCTTCTCTGCCCTGCTTTTCTTTTCATTGGCCTTGCCGGCCTACGCCTGGAACGCAGCCGGCCACCGCTT
GGTAGCCGTTATCGCCTGGCAACAACTATCGCCAGCAACACGTGACGCTATCTCGGCCGCGCTGGCCCACCATCCGGACC
ATGAGCGCTGGGTCGAAAAAGCCCGCTCCCGCGAGGGGATAGCCGTTTTCGCCGAAGCCTCAACCTGGCCGGACGATATT
CGCAATGACCCTCGCTTATATGACGAGGATCGCGAACCGCCCACCCCGGCCGTGCCCGGACTCCCTGAGACGGCACGCCA
CAAACGCTGGCACTACGTCGATCTGGACGCCACGGGCAAGGTTCGTGACGGCGAACTCGACCGGCAGATCGAACGCCTGA
GCCAACTGCTCCAGGCCAAAGGCTCATCCCCCGGCACGCGAAAGAGCGAACAGATTGCCTATGCCCTGCCCTGGCTGCTG
CATCTCGTGGCCGACATCCATCAGCCATTGCATGTCGGGCAGCACGGCGACGAAGGTGGCAACAAGGTTGAAATCGAGAA
TCCGTTCAACAAGCGCCTGCCCTTCAGCAGCCTGCATCTATACTGGGACGACCTACCCGGTCCGCCGTGGTTGCGCGGCA
ACCGCCTCGAAAAGAATGCCGGCCGATTGCTCGACAGCTATCCGAAACCGGTTCAGGGAAATGTGGCGCTATGGCGGGAT
GAAAGCCATCAATTGCTTGCTGCCGCCTACCCGAAAGTCAGCGGCAGCCTGCTTCCCATCATCAGCGAGGATTTTCAGGA
CAATGCCCGCCAAATCGCCAATCGACGCATCGTCGAGGCTGGCTATCGACTGGGACACCTGCTTGAAAGCATCTTCCGCG
AGCGCGTTTCACGTGAAACGCAATAG

Upstream 100 bases:

>100_bases
GGCTGCATCGATGCGAGCGGCCTGCAGCAGGGCAAAAGCGAGTGAATTGAAGGGCAATCTGGACATAGTGCGCGATTATC
GCACGCGGCATAATGAGCCA

Downstream 100 bases:

>100_bases
AATTCCGTCATGAATGGCCTGCACCTGATCGCCGACCTGCACGACTGCCACTGCCCCTCGGGCCTGTTGCTCGATGCGCC
ACGACTGGAACGCTATTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Phospholipase C/P1 Nuclease Domain-Containing Protein; 3-Nucleotidase/Nuclease; S1/P1 Endonuclease Family Protein; Endonuclease; Phospholipase C/P1 Nuclease Family Protein

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MRQIFSALLFFSLALPAYAWNAAGHRLVAVIAWQQLSPATRDAISAALAHHPDHERWVEKARSREGIAVFAEASTWPDDI
RNDPRLYDEDREPPTPAVPGLPETARHKRWHYVDLDATGKVRDGELDRQIERLSQLLQAKGSSPGTRKSEQIAYALPWLL
HLVADIHQPLHVGQHGDEGGNKVEIENPFNKRLPFSSLHLYWDDLPGPPWLRGNRLEKNAGRLLDSYPKPVQGNVALWRD
ESHQLLAAAYPKVSGSLLPIISEDFQDNARQIANRRIVEAGYRLGHLLESIFRERVSRETQ

Sequences:

>Translated_301_residues
MRQIFSALLFFSLALPAYAWNAAGHRLVAVIAWQQLSPATRDAISAALAHHPDHERWVEKARSREGIAVFAEASTWPDDI
RNDPRLYDEDREPPTPAVPGLPETARHKRWHYVDLDATGKVRDGELDRQIERLSQLLQAKGSSPGTRKSEQIAYALPWLL
HLVADIHQPLHVGQHGDEGGNKVEIENPFNKRLPFSSLHLYWDDLPGPPWLRGNRLEKNAGRLLDSYPKPVQGNVALWRD
ESHQLLAAAYPKVSGSLLPIISEDFQDNARQIANRRIVEAGYRLGHLLESIFRERVSRETQ
>Mature_301_residues
MRQIFSALLFFSLALPAYAWNAAGHRLVAVIAWQQLSPATRDAISAALAHHPDHERWVEKARSREGIAVFAEASTWPDDI
RNDPRLYDEDREPPTPAVPGLPETARHKRWHYVDLDATGKVRDGELDRQIERLSQLLQAKGSSPGTRKSEQIAYALPWLL
HLVADIHQPLHVGQHGDEGGNKVEIENPFNKRLPFSSLHLYWDDLPGPPWLRGNRLEKNAGRLLDSYPKPVQGNVALWRD
ESHQLLAAAYPKVSGSLLPIISEDFQDNARQIANRRIVEAGYRLGHLLESIFRERVSRETQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34126; Mature: 34126

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQIFSALLFFSLALPAYAWNAAGHRLVAVIAWQQLSPATRDAISAALAHHPDHERWVEK
CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCHHHHHHHHHHHHCCCCHHHHHHH
ARSREGIAVFAEASTWPDDIRNDPRLYDEDREPPTPAVPGLPETARHKRWHYVDLDATGK
HHCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCC
VRDGELDRQIERLSQLLQAKGSSPGTRKSEQIAYALPWLLHLVADIHQPLHVGQHGDEGG
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NKVEIENPFNKRLPFSSLHLYWDDLPGPPWLRGNRLEKNAGRLLDSYPKPVQGNVALWRD
CEEEECCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEC
ESHQLLAAAYPKVSGSLLPIISEDFQDNARQIANRRIVEAGYRLGHLLESIFRERVSRET
CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q
C
>Mature Secondary Structure
MRQIFSALLFFSLALPAYAWNAAGHRLVAVIAWQQLSPATRDAISAALAHHPDHERWVEK
CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCHHHHHHHHHHHHCCCCHHHHHHH
ARSREGIAVFAEASTWPDDIRNDPRLYDEDREPPTPAVPGLPETARHKRWHYVDLDATGK
HHCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCC
VRDGELDRQIERLSQLLQAKGSSPGTRKSEQIAYALPWLLHLVADIHQPLHVGQHGDEGG
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NKVEIENPFNKRLPFSSLHLYWDDLPGPPWLRGNRLEKNAGRLLDSYPKPVQGNVALWRD
CEEEECCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEC
ESHQLLAAAYPKVSGSLLPIISEDFQDNARQIANRRIVEAGYRLGHLLESIFRERVSRET
CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA