| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
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The map label for this gene is 71894020
Identifier: 71894020
GI number: 71894020
Start: 891333
End: 892334
Strand: Reverse
Name: 71894020
Synonym: MHJ_0672
Alternate gene names: NA
Gene position: 892334-891333 (Counterclockwise)
Preceding gene: 71894021
Following gene: 71894011
Centisome position: 99.43
GC content: 25.25
Gene sequence:
>1002_bases TTAGTTAGTTGTGGTTCAACCCATTTCGGGTTAAATATTTCAAGAGAAAGTCAAACTGGTATTGAGAATGCGAAAAAATT AAAAAAAATAGTAAATTCACCGAATTTAATTGAATTAAGTCCAGAAAATAATGAGAAAATATATGAAGATAAAGATGCTA AATTCTTCTTGTTTGATTTAAATTCGGCTGTAAATGGTGGGAAAAATTTAGAATTAATGCCAGAATTTACTACAAAATTT AGTCCAAAAACAGAAATAACCTACCTTAATTTCATAAATCGATATTATAATACAAGGCAATTACAACAAAAAAAGAAAAG TTTAAATCAGGATTCAAATTCAATTTATATACCTCACGTTGACGAAAAATTCAAGGATTTCTGATATGTTTTTATGATTC CTACCTCAATTGGCTTTTCTGCATTGGAACTTAATGGTAAAAAAACTGTAATCGATAGGGAAAAAACAAAGTTGCCAAGT ACATTAATTCCTTATTCATCTGTTGAAGTGAAAATTTTAAAAAAAGGAATTATTTCGGCGGATAAAAAAAATTATCTGCA AATAAATGTCAATCAAATGATAAATTCTTTTGCATTCCGAGAGAAAAAAAGCAATGAGCCTAATTCAAGCGAAATTAACG TTTTTGGATTTCAAGATAATAAGGCCTATCCAAATTATAAGTTAATTTTTGATAGTTTAGATTCTTCTAAAAAAATAATA AAATTTAAACTTCACAGAAAAAATGATAATTTGCATGAAGAAAGAAGTGCAAAAAACAAGCTAAATTCCTATATTTCTGT AATGAATTTTATTTATAAAGCAAAAGAATATAAACAAAATTTAAATCCGGATGATTTTTTTGAAAAAAATACTGAACAAA AAGATAAAAATTCTGAATATCCTTTTGTTAGATTTTATACTCAAACATTTATTGTTCCTTTTGAAGGAAAAGAAGAAGTA TTTGATTCAGATTTTTCAATTTTAATTGAAAAATCTGAATAA
Upstream 100 bases:
>100_bases TTAAATATTTTTAAATTCGACTATGAAAAAATTAAAAATATATAAGAATTTAAATTATTTTTTGCCTAGTTTTGTTTTTT TAGGTGGCGCTTTTTTTGTT
Downstream 100 bases:
>100_bases AAAGCTTTACTTTTTCTCATAAAAAACTAATTTTTCCTTTAATTTTTCAAGTTTAGTTCGTTCTAAATCTATTTTTTCTC TAGGAGCTTTTTCTAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MVSCGSTHFGLNISRESQTGIENAKKLKKIVNSPNLIELSPENNEKIYEDKDAKFFLFDLNSAVNGGKNLELMPEFTTKF SPKTEITYLNFINRYYNTRQLQQKKKSLNQDSNSIYIPHVDEKFKDFWYVFMIPTSIGFSALELNGKKTVIDREKTKLPS TLIPYSSVEVKILKKGIISADKKNYLQINVNQMINSFAFREKKSNEPNSSEINVFGFQDNKAYPNYKLIFDSLDSSKKII KFKLHRKNDNLHEERSAKNKLNSYISVMNFIYKAKEYKQNLNPDDFFEKNTEQKDKNSEYPFVRFYTQTFIVPFEGKEEV FDSDFSILIEKSE
Sequences:
>Translated_333_residues LVSCGSTHFGLNISRESQTGIENAKKLKKIVNSPNLIELSPENNEKIYEDKDAKFFLFDLNSAVNGGKNLELMPEFTTKF SPKTEITYLNFINRYYNTRQLQQKKKSLNQDSNSIYIPHVDEKFKDF*YVFMIPTSIGFSALELNGKKTVIDREKTKLPS TLIPYSSVEVKILKKGIISADKKNYLQINVNQMINSFAFREKKSNEPNSSEINVFGFQDNKAYPNYKLIFDSLDSSKKII KFKLHRKNDNLHEERSAKNKLNSYISVMNFIYKAKEYKQNLNPDDFFEKNTEQKDKNSEYPFVRFYTQTFIVPFEGKEEV FDSDFSILIEKSE >Mature_333_residues LVSCGSTHFGLNISRESQTGIENAKKLKKIVNSPNLIELSPENNEKIYEDKDAKFFLFDLNSAVNGGKNLELMPEFTTKF SPKTEITYLNFINRYYNTRQLQQKKKSLNQDSNSIYIPHVDEKFKDF*YVFMIPTSIGFSALELNGKKTVIDREKTKLPS TLIPYSSVEVKILKKGIISADKKNYLQINVNQMINSFAFREKKSNEPNSSEINVFGFQDNKAYPNYKLIFDSLDSSKKII KFKLHRKNDNLHEERSAKNKLNSYISVMNFIYKAKEYKQNLNPDDFFEKNTEQKDKNSEYPFVRFYTQTFIVPFEGKEEV FDSDFSILIEKSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38689; Mature: 38689
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure LVSCGSTHFGLNISRESQTGIENAKKLKKIVNSPNLIELSPENNEKIYEDKDAKFFLFDL CCCCCCCCCCEEECCCHHCCHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCEEEEEEC NSAVNGGKNLELMPEFTTKFSPKTEITYLNFINRYYNTRQLQQKKKSLNQDSNSIYIPHV CCCCCCCCCEEECCHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC DEKFKDFYVFMIPTSIGFSALELNGKKTVIDREKTKLPSTLIPYSSVEVKILKKGIISAD CCCCCCEEEEEEECCCCCEEEEECCCEEEECCHHHCCCCCCCCCCCCEEEEEHHHHCCCC KKNYLQINVNQMINSFAFREKKSNEPNSSEINVFGFQDNKAYPNYKLIFDSLDSSKKIIK CCCEEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCEEEE FKLHRKNDNLHEERSAKNKLNSYISVMNFIYKAKEYKQNLNPDDFFEKNTEQKDKNSEYP EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCC FVRFYTQTFIVPFEGKEEVFDSDFSILIEKSE EEEEEEEEEEEEECCCHHHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA